Names & Information
Knowledge of BnaC06G0271500ZY:
| Gene Name | BnaC06G0271500ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g24000D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1275 nt ATGTCTGCCTCGTCTTCATCTTTTATTCCCAAGTTTGATGTCTTCCTAAGTTTCAGCTCAGAAGAAGACACCGCCAAAAC TTTTGTAACGGATCTTTTCAGTTCCTTGTCAGAAAAAGGCATTACAACTTATTACAAAGATGAAAAACTAGAGGAGGGAG TCTCATCTTCGGGTTCTGACCTAAGCAAATGTATTAGAGATTCAAAACTAGCCGTTGTGGTGGTCTCCGAAAGCTATCCA ACCTCTGTTTTATGCCTGAACGAACTCCAAACAATACTAAACTTGCACGATGAAGATCAACTCTCCGTCCTACTCATCTT CTATGGAGTGGAAACTTCGAATATAAGAAAACAAACCGGAGAATACGCAGAACCTTTCAGAAATCTTGGTGAACAGTATT CAGCTGAGAAGGTTCAATCATGGAGGAGGGTTCTTACCAAACTCACCGGTATATCCGGCCTGGATTCACGTTTTTGGAGC AGAGAAGCAGAAATGGTCGATCTGATTACAAATGAAATATCACTGGTGATTTCAAATAAGCCGATCAGTCCATCCACATT CAAAGCGGATGGACCTGTTGCAATGGATCGTCATATGCATGCATTATATGAGCTGCTGGATTTAAATTCCAACAAGGAAG TCCGATTGGTCGGTATATGTGGTCCAGGAGGCGTTGGCAAGACGACACTAGCAAGATACGCATACGAAGAAATGTCTGTC AATTTCCATGTCCATATGTTTGTAGACAACTCCGAAAAGAACTATCACCAAGACCATCAAGAAACTTTCACATCGGGAGA GATTCAAGAAGACGCTCAAACTGCTGTAATCAAGTCAGCGCTTGGACAGCGAAGAGGTCTGCTTGTGATTGACTGCGTGG ATAACCTCCAACAGTTAAAGGACATAGCAGAGATCGTTGGCTGGTTTGGTTCAGGAAGCAGAGTCATCTTTATTACACAG GAAAAGAGCTTATTAGATGAAGTTGGTGTGGAGCATGTCTATGAACTCCAGTCTCTAAGATACGACGAAGCTCTCCTACT CTTCTCCCGATATGCTTTCAAGCAGCAACACCCTTCTACTAGTTTTGAATCACTTGCTCTTCGTGCTGTTCAGATTGCTT GTTTCCTTCCTCTGACTCTTCAAATCCTAGGTTCGTCTTTACATGGCAAGGATGAAAGGACTTGGGAGGAGGAGCTGGAA AAACTGGAAGGCGACCAAGAGAAATCTATAGTGGAAGTAATGAAGAAAACCTACGCAAGAGCAAATGAGGAGTAG |
| AA seq | Len:425 aa MSASSSSFIPKFDVFLSFSSEEDTAKTFVTDLFSSLSEKGITTYYKDEKLEEGVSSSGSDLSKCIRDSKLAVVVVSESYP TSVLCLNELQTILNLHDEDQLSVLLIFYGVETSNIRKQTGEYAEPFRNLGEQYSAEKVQSWRRVLTKLTGISGLDSRFWS REAEMVDLITNEISLVISNKPISPSTFKADGPVAMDRHMHALYELLDLNSNKEVRLVGICGPGGVGKTTLARYAYEEMSV NFHVHMFVDNSEKNYHQDHQETFTSGEIQEDAQTAVIKSALGQRRGLLVIDCVDNLQQLKDIAEIVGWFGSGSRVIFITQ EKSLLDEVGVEHVYELQSLRYDEALLLFSRYAFKQQHPSTSFESLALRAVQIACFLPLTLQILGSSLHGKDERTWEEELE KLEGDQEKSIVEVMKKTYARANEE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | HSPA4 nucleotide-binding domain protein; K03283 heat shock 70kDa protein 1/8 (A) |