Names & Information
Knowledge of BnaC06G0275200GG:
| Gene Name | BnaC06G0275200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g24010D [Brassica napus] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:2763 nt ATGGGAGTTACTGAAATCTCAAAGGAAGAAGAGACGCAGTTTCGAGCAGAGGAAAAGTCCCCCCCAACCACCCCACTTGC ACATACACACTATGTCCCTGGATGCCATTGTTTTAAGAGTAGCTGCTATACAACTGTAGTATGTAGCCATGACCAAAACA AAGCCATGGAGGATGAGGCAGCAATGGTAGCCAAGACAGTTCAAAGTGTCTCAAGTGGACTGCTGAAGATGAGGCCGACC AGTGGGGTCGATTTAGTTGGGATGGAAGCACACATGGTGAAGATGCATTTCCTTTTGAATATGGGGTCTACAAATGAGGT TCTCATGATAGGAATATGGGGCATGGGAGGCGTAGGCAAAACCACCATTGCCAAGTGTCTCTATGAACGATTTTCAAGTC AATTTCCAGTTCATTATTTCATTGAAGACATTAAGAAGGTTTATAAGGACAAGAGTCCATCCTACTTACAGGAAACTTTC CTCTACAAAATCACTGGTCAACAAATTGATTCTCAAAGGGTTGTAGCAGGATCTCAGGTAATAAAGGCAAGACTCGAGCA CCAGAAAGTACTTGTGGTGCTTGATGGTTTGGATAAAGTGGAGCAGATGCATGCACTGGCAAAAGAGACGAGCTGGTTTG GTCGAGGGAGCCGAATCATCATAACCACACAGGACAGGGGTCTGCTTACTTCCTGTGGAGTAAACCATGTACATGAGGTT AAGTGCTTGGACGATAAGGATGCCCTCAAAGTATTTAAACAATCAGTTTTCGGAGGAAGAAGGCCTCCTTCTGATGAATT TGAGCAACTCTTCATCAGAGCCTCTCGTCTGGCTCACGGCCTTCCCTCTGCCCTCGTGGCTTATGCCTTACATCTTAGTG AAAACACTACCATAGAGAGATGGGAAGATGAATTACGTCTCCTTGAAACATCACCTCATAAGAATGTTGAGGAGATCCTG AGAAATAGCTATGATGGTTTAGATAACAATGACAAGATTGCTTTCCTTCATGTTGCATGTCTCCTTAACGGATACCCTTT CAACCATGTCACTTCCCTTCTTGATGCTGGTTCTCCTCGGATAAATCATTTAAGTAAGAAGTCTCTCATAAGCATATCAA CAGATGGATGCATAAACATGCATTTCTTGGTCGTACAAACAGGCAAGGAAATTGTGCGCCAAGAATGTGAGTATAGACCT TTCAGACAAAGGTTCCTATGGGATGCTGATGATATCTATAATGTCCTCGATAACAAAATAGGTACGAACGAAACTGATGG TGTGATGCTACACATTTGTAAGATGCATGATAAGTTAACTATGAGTGATACAGCATTTGATGGCATGCGTAGTATCAAGT TTCTCAAGTTCTTCCACCACTTGTGTGATACAAAGTCTAAATTGGAGCTCAAATCATCCGAGTTTTATTTTCCCCCAAAT CTTAGGCTACTACATTGGGATGCCTGTGCGTTGGAAACCTTACAATCCAGGTTCCGAGACCTTGTTGAAGTCAATCTTCG ATACAGCAACCTCAAGAGTCTTTGGGATGACACGTCGATCCTTCCTAGTCTAGAAAGACTAGATGTGACAGGCTCGAAAA ATCTGATACAACTTCCCAATCTTTCAACAGCCGTGAACTTCGAGGAATTGAGAGTAGAAGGGTGCAAGAGGCTACAGGAA ATTTTGCAGTCCCTAAGGGGCTTACGCAAGCTCACAAAACTCAACGCAAGCCACTGTAATAGCCGTATGAGTATTTTCAT AAGCTTTCCTAATAAGGAAGCGGGTTTGGGTTGTCTTAAAGATCTATCCATCGACGGTCAAATAGACTTAAATTTATGGG GCCTATACGGATTTGCAGATCACATCTCCTTTAGGTCCAAACAACAAATCCTGGATGAATCGGTGATGATGGAAGAGAGC ACATCTCATCAGCTCACGTCAGATCCCAAGGGATTCCATTCACTCAACATCAAGAAGTCCAGGTACACAGAGTCCAACGC TCCTTTCACCTGTCCCAGCTTTTCAGTCTTTACCGGTTTAACAGAGCTAAAGCTGGTCAACTTGAACATTGAAGAAATCC CATACAACATTGATTGCTTGCTAAACCTAGAGAAACTGGACCTCAGCGGAAATGATTTTGTGTCCCTACCAAACGCCATT GGGGACCTGCGCAAGTTGAAGTATCTCAGCCTTCAGAACTGCCGCAAAATCACATCACTGCCACAACTTGCTCAGGTGGA GACGCTCATACTTTCTGAATGCGTTCAACTTCAGTGGTTGCAGCGATTTCTTGTTGGCTTGCTTGAGCTTTGGCTTGACA ACTGCAAGGATGTTCATGTTTTGTCAAAACAACTCAGTCGGTTCACCAAGTTAACATATTTAGACCTCAGCAGACATGAC TTTGTCAGACTGCCTCAAAGTATCAGGGTGCTTACATCCTTGGAAACTTTCTACCTCAACAACTGCAAGAAACTCAAATC AGTGGAGGAGCTTCCACAAAGCGTCAAGTATCTCTACGCACACAGCTGCGATTCCCTGGAGAAGGTTTCCCTTTCTCCAA ATCACTCGATAAAACACCTTGATATTCTCCATTGCCCCCGCCTGAAACAAGAAGAACACAAGCATCTAATGGATCTGTTT ATACATGATGGACATAGTCAAGGGGCTTCAAGGCGATGTGCTTGCTTATCTGAAACTGAAACATCCAAGAAACTCAGCCG GACTAGAAAAATTTTTCGGTCCCTCAAATCAGTGTTTAGTTGA |
| AA seq | Len:921 aa MGVTEISKEEETQFRAEEKSPPTTPLAHTHYVPGCHCFKSSCYTTVVCSHDQNKAMEDEAAMVAKTVQSVSSGLLKMRPT SGVDLVGMEAHMVKMHFLLNMGSTNEVLMIGIWGMGGVGKTTIAKCLYERFSSQFPVHYFIEDIKKVYKDKSPSYLQETF LYKITGQQIDSQRVVAGSQVIKARLEHQKVLVVLDGLDKVEQMHALAKETSWFGRGSRIIITTQDRGLLTSCGVNHVHEV KCLDDKDALKVFKQSVFGGRRPPSDEFEQLFIRASRLAHGLPSALVAYALHLSENTTIERWEDELRLLETSPHKNVEEIL RNSYDGLDNNDKIAFLHVACLLNGYPFNHVTSLLDAGSPRINHLSKKSLISISTDGCINMHFLVVQTGKEIVRQECEYRP FRQRFLWDADDIYNVLDNKIGTNETDGVMLHICKMHDKLTMSDTAFDGMRSIKFLKFFHHLCDTKSKLELKSSEFYFPPN LRLLHWDACALETLQSRFRDLVEVNLRYSNLKSLWDDTSILPSLERLDVTGSKNLIQLPNLSTAVNFEELRVEGCKRLQE ILQSLRGLRKLTKLNASHCNSRMSIFISFPNKEAGLGCLKDLSIDGQIDLNLWGLYGFADHISFRSKQQILDESVMMEES TSHQLTSDPKGFHSLNIKKSRYTESNAPFTCPSFSVFTGLTELKLVNLNIEEIPYNIDCLLNLEKLDLSGNDFVSLPNAI GDLRKLKYLSLQNCRKITSLPQLAQVETLILSECVQLQWLQRFLVGLLELWLDNCKDVHVLSKQLSRFTKLTYLDLSRHD FVRLPQSIRVLTSLETFYLNNCKKLKSVEELPQSVKYLYAHSCDSLEKVSLSPNHSIKHLDILHCPRLKQEEHKHLMDLF IHDGHSQGASRRCACLSETETSKKLSRTRKIFRSLKSVFS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |