Names & Information
Knowledge of BnaC06G0286800ZS:
| Gene Name | BnaC06G0286800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA07g22910D [Brassica napus] |
| Best Hit (SwissProt) | Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana GN=At1g72960 PE=2 SV=2 |
| NT seq | Len:3606 nt ATGAACACGGTCTTAAAGAAACGATCGTGCTTTAAAACAAAAGTTAAGTCCTTACGACTATTCGAATCCAGGTCATCGTT ATCTTCTTCTTTTTCTTTCCCTCCAAAAAAATACGATGTCTTTTTGAGCTTCAGAGGCGCAGATACTCGCAAGAACTTCG TCAGTTTTCTGTACAAGGAGTTAGAGACCAAAGGCATTCAAACTTTCAAAGACGACAAGGCACTGGTGCGTGGCCGTCCG ATTGCACCAGAGCTTGTCCAAGCCATCCAAGGGACAAGAATCGCCGTGGTGGTGGTCTCTCCGACTTACTCAGCTTCCTA CTGGTGTCTTGAAGAGCTTGTTAAGATTTTGAAACTCGAGAAAAAAGGTTTGCTTATTGTGGTGCCGATTTTCTACGAGG TTGATCCTTGTCAAGTGAGGAGACAGAAGGGAGAAGTCGCGGAACAGTTCAAGAAACACAAGAAGAGATATAGCAGAGAA AGAGTCAGATCTTGGAGGAATGCGCTGACTAGGGTAACTATTCTCTCCGGCGACTGTTCAAAAAACTGCAAAGATGACGC GACGCTGGTTGATGGAATTACTAAGAGAATTTCAGAGATTTTGTCCACGGAAACACAAAGCAATGGTAATAACCTAATTG GTTTCGACAAACACATGAAGGAATTGTATCCGTTATTGGATCTAAATTCAGACGAAGGTGTTCAAGTAAGTGGAATTTGG GGAAGAGGAAGCAATGGAATATCAGCACTCGCGAGAGGCGTTTACCAAGACATCTTACCTAACTTTGAAGCTCATTGTTT TCTCGAAGACCTCAGAAAGATCTCACTAGATTGCCAAAAATCTCATCTACAAGAAGAGCTTCTTTCCAAGATGGAAGGTC CCTGCTTGAGCACAAAGAGCTCTCGCATGTGTTTTGACGCGATCAAAGCAAGGCTCGGGAACAAGAAGGTTCTGCTTGTG GCTAACGACGTGGACAAGATCGAAAAGTTAGATGCGCTTGCTAACGAATTTAGTTGGTTTGGTCCAGGGAGTAGAATCAT CATAGTCACACAAGATAAGCAATTACTTAGTTCATGGGGTGTGAAGAGTGTCTACGAAGTTGAGCTCTTGAGATGCTGTG AAGTTGGTAAGCTGTGGAGGTCTGAAGCCTTCAAGCAAAAACAAGATCCTGAGTGTCTCGAGGGGTCCATGAATCTTCCT GGTAATAAGAGCGAGGGAAATTGTTCTGTACAGCTTATTGATGGAGATGGTACATACAATGTCTCTGGCATAGATCACTT CATCAAAGAGGTGAAGCTAGGAGAGTGTGGCCTCTCCTATGCTGTTGTCTCCATTATGGGTCCTCAAAGCAGCGGGAAGA GTACCTTGTTGAATAATTTGTTTGGAACAAACTTTATGGAGATGGATGCATTTAAGGGAAGGTCTCAGACCACAAAAGGT ATCTGGCTTGCAAGATGTGCCGGTATAGAGCCTTGCACCCTTGTAATGGACTTGGAGGGCACTGATGGAAGAGAGCGAGG AGAGGATGATACTGCATTCGAGAAACAAAGTGCTCTTTTTGCTCTTGCCATCTCAGATATCGTCTTGATCAATATGTGGT GTCACGATATTGGCCGTGAACAAGCTGCTAATAAACCTCTCTTGAAAACTGTCTTTCAGGTTATGATGCGGTTGTTTAGT CCACGTAAAACAACAATGTTGTTTGTAATACGAGATAAAACCAGGACGCCATTGGAAAACTTAGAGCCTGTCTTAAGGGA AGATATTCAGAAGATATGGGACTCTGTTCCAAAGCCTGAGGCACACAAAGAAACTCCTATGAGTGACTTCTTCAACGTTG AAGTTGTTGCTCTTTCCAGTTATGAGGAGAAGGAAGAACAGTTTAAAGAGCAGGTTGCTAGTTTGAGACAACGGTTCATG CATTCTATTGCACCGGGTGGTCTTGCTGGAGACAGAAGAGGAGTGATTCCAGCCTCAGGTTTTGCATTTAGTGCTGATCA AATCTGGAGAGTCATCAAAGAGAATAAGGATCTTGACCTTCCTGCTCACAAGGTCATGGTAGCTACTGTCCGGTGCGAAG AAATCTCAAATGAGAAGTTTGCCCATTTCATTACAAACGAGGACTGGCGCAAACTTGATGAGGAGGTGCAAGCTGGTCCA GTGTCTGGTTTTGGAAAGAGGCTTACTTCTATTCTTGGTTCTTGCTTATCAGAATATGATGGGGAGGCTACATTCTTTGA TGAAGGTGTCAGATCATCAAAGAGACATCAGCTTGAAGAAAAGCTTCTCCAACTTGTGAATCCAGCGTTTCAAGATGTGT TGGGACACATAAGATGGGGGATGCTTGAGAAGTTTAAGGCTTCTTTTGATAAAGCTTTAGAAATTGGTGAAGGGTTCTCT TCAGCTTCCACTACTTGGCTCAAGGCTTGCATGGACCAGTTCGATGAAGAGTGCGCAGGTGCCATCATTGAACAAGCTAA TTGGGACACAGCCAAAGTAAGGGAAAAGTTAGTCCGTGATATTGAGGCTCATGTTTCCTCTGTGAGGACTTCCAAGTTAT CTGAACTTACCAGTCAATACGAGACAAAGCTTCACCAAGCATTGTCAGAACCGGTGGAAGCTTTGTTGGAAGGAGCGAGT GATCAGACGTGGACAACAGTGAAGAAGCTTCATGGACGTGAAACTGAAACTGCTGTTTCTGGATTCAGTAGTGCATTAGC TGCTTTTGATATTGAAGAAGAAACAAGAGAAAAAATGGTGAAGAGTCTTCAGGAGTATTCAAGAGGTGTCATAGAATCTA AGGCAAAGGAAGAAGCTGGAAGGGTTTTGATGCGTATGAAAGATAGGTTTGCTACAATCTTCAGCAATGATGCTGATTCA ATGCCACGAGTTTGGACTGGAAATGAAGATCTTCGAGCAATTACTAAAGCAGCTAGATCAGCTTCCTTGAAGTTGCTCTC AGTAATGGCTGTAATGCGATTGGGTGATGAAACCGATAACATTGAGAAGACACTAACTGTTGCTCTTTTGGATTCAACAC CGTCTAAAAAGAGCATTACAGCATCTGATCCATTGGCTTCAAGCACTTGGGATGAGATTCCATCATCAAGAACTTTGATC ACACCAGTCCACTGTAAATCTATATGGAGACAGTTCAAGACAGAGACAGAATATACAGTGACTCAAGCCATATCTGCACA GGCATGGTTACTTTACTCACAAGAAGCGAATAAGCGTGGTAGTAACTGGTTACCCCCTCCATGGGCTATTTTTGCATTGA TCATACTTGGATTCAACGAGTTCATGACTCTTCTAAGAAACCCTCTCTATCTTGGTGTCTTGTTTGTTGGTTTTCTACTT CTGAAAGCACTCTGGACGCAACTGGATATCCCTGGCGAGTTCCGCAATGGTGCACTTCCAGGGATCATATCAATATCAGC AAAGTTTGTTCCCACAATCATGAACCTTGTCAAGAACCTTGCTGCACAAGGAGAAGCTCCTCCTGCAGCTAATCCAGAGA ACCGTCGTCCTAGTAACAACACTTCTTCAAGTGCTTCCTCATCAGATAATCCAATAGAGCACAAAAGTGCCTCAAAGACA GATTAA |
| AA seq | Len:1202 aa MNTVLKKRSCFKTKVKSLRLFESRSSLSSSFSFPPKKYDVFLSFRGADTRKNFVSFLYKELETKGIQTFKDDKALVRGRP IAPELVQAIQGTRIAVVVVSPTYSASYWCLEELVKILKLEKKGLLIVVPIFYEVDPCQVRRQKGEVAEQFKKHKKRYSRE RVRSWRNALTRVTILSGDCSKNCKDDATLVDGITKRISEILSTETQSNGNNLIGFDKHMKELYPLLDLNSDEGVQVSGIW GRGSNGISALARGVYQDILPNFEAHCFLEDLRKISLDCQKSHLQEELLSKMEGPCLSTKSSRMCFDAIKARLGNKKVLLV ANDVDKIEKLDALANEFSWFGPGSRIIIVTQDKQLLSSWGVKSVYEVELLRCCEVGKLWRSEAFKQKQDPECLEGSMNLP GNKSEGNCSVQLIDGDGTYNVSGIDHFIKEVKLGECGLSYAVVSIMGPQSSGKSTLLNNLFGTNFMEMDAFKGRSQTTKG IWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFS PRKTTMLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPEAHKETPMSDFFNVEVVALSSYEEKEEQFKEQVASLRQRFM HSIAPGGLAGDRRGVIPASGFAFSADQIWRVIKENKDLDLPAHKVMVATVRCEEISNEKFAHFITNEDWRKLDEEVQAGP VSGFGKRLTSILGSCLSEYDGEATFFDEGVRSSKRHQLEEKLLQLVNPAFQDVLGHIRWGMLEKFKASFDKALEIGEGFS SASTTWLKACMDQFDEECAGAIIEQANWDTAKVREKLVRDIEAHVSSVRTSKLSELTSQYETKLHQALSEPVEALLEGAS DQTWTTVKKLHGRETETAVSGFSSALAAFDIEEETREKMVKSLQEYSRGVIESKAKEEAGRVLMRMKDRFATIFSNDADS MPRVWTGNEDLRAITKAARSASLKLLSVMAVMRLGDETDNIEKTLTVALLDSTPSKKSITASDPLASSTWDEIPSSRTLI TPVHCKSIWRQFKTETEYTVTQAISAQAWLLYSQEANKRGSNWLPPPWAIFALIILGFNEFMTLLRNPLYLGVLFVGFLL LKALWTQLDIPGEFRNGALPGIISISAKFVPTIMNLVKNLAAQGEAPPAANPENRRPSNNTSSSASSSDNPIEHKSASKT D* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | sucrose synthase; K00695 sucrose synthase [EC:2.4.1.13] (A) |