Names & Information
Knowledge of BnaC06G0287400ZS:
| Gene Name | BnaC06G0287400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g23980D [Brassica napus] |
| Best Hit (SwissProt) | TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1 |
| NT seq | Len:2040 nt ATGGATTCATCTGCTGCTTCACCTAGTGACAAGAAGCGGTACGATGTATTCCTCAGCTTCCGAGGAAAAGAGACACGTAG AGGCATCGTCAGCCACTTGCACAACGCACTTGTCGGGAGAGTTGATGACACATTCAAAGATGACGAAACAATTGAAATTG GTGACACAATTTCTGAAGAAATCAAGGAAGCTATACGGAACTCCAAGTTTGCCATTGTGGTTATCTCCAAAGACTATGTT TCCTCAACTTGGTGCCTGAACGAGCTCCAAATGATAATGGATCTTCACAAGAAGAAGCAACTCCTTGTTCTCCCAATCTT CTACGACGTGGTTCCTTCAGATGTTAAGCACCAGAGAGGCACATTTTCCTTAAGACGGTATCAACCCTCGATGGTTATGC GATTACTTTCCAGCAAGGAAAGAACAATGGCGGCACATGTTCGGAAATGGAGAAAAGCCCTCACCCGAGTCGGAGGAATA TCAGGCAAGGAATCTAGAGTCTGCAAGGACGAGGCCACGATGGTTGACGATATTGTTGAGCACATTGCAAGAGAGCTAAC CTCAATGCACCCACTAGAGATGAGTGATATTGTTGGAATGGACGCCCACATGGAACAAATCGAACCTCTGTTGGATATGG ACTCGGCAACAAATGAGGTTCGGATGATAGGAATATGGGGAATGGGAGGCATAGGCAAAACCACAATTGCCAAGTGTCTC TATAACAAATACTCGCCTCGGTTTGGTCGTCGCTTTTGCTTCATAGAGAACATTAGAAATGCTGGAAAGAATGGCCTCCC AGGTTTACAAAGAGAGCTTCTTTCTAAAATCCTGGGCAAAAAGCAAGCAAACATCTCGGATAAGGAGAAGGGATGCACTC TTATCAAGTCAAAGCTTAAGAAACTCAAAGTTCTCCTTGTCCTTGATGATGTGGACAACGTGGAACCGCTTCTTGCTCTG GCAAAAGAGACTAGCTGGTTCGGACCAGGGAGCCGAATCATTATCACAACACGAGATTTAGGCTTGCTCCACTTCTGTAG GCTGAGAATTGTACACCATGTAAACTTTTTGGGACATGATGATTCGATCCGAGTCTTCAAACAAGTTGCTTTTGACGGGG GACGGCCTCCTTCTGATGTCTACGAACAACTATCAATCCGTGCTTCTAAGCTTGCTCAAGGGCTTCCTTCAGCGCTAGAT ACTTTTGGCACATATCTCCGTCAAAAGATCTCTACAGAGGCGTGGGAAAGGGCATTGGATATTCTTGAAAAATTCCCTCC TCAAAGTATCATGGAAATTGTGAGAACTAGCTACGAAGGTTTAGACAAACGAGACCAGGCTGTGTTCCTTCACCTTGCAT GTCTCTTCAACGGAGACAATTTCCATCGTGTAGCTACGCTATTTGATCATGGTGATGAACGGATAAAAGATTTAAGAAAG AAGTCTCTCATTGATATATCACCTGATGGATGCATCACAATGCATGTCTTGGTAGAACAAGCGGGGAGAGAAATTGTGCT CCAGGAATCCAAGTCCAAGCTTTGGAGGCGAAGAATCTTGTGGGAACCCGAGGAAATTGTTTCTGTGCTGCAAAACACCA CGGGTATAGCATTAGCAACAACTGAAGGTGTATCACTACACATGTGTGATATGCCTCGCATGGTGTCTATTGACGGTGGC ATTCTAAACGCAATCAACAATCTCGAATACTTCATGGCCTTCACACATTTGAACAATATAGAGTCCACGTTGAACTTCAA TCAGGGCCTCGGTCAACTGAAGAGACTAGATGTTACTGGCTCAAAGAATCTGATCGAAATTCCAGATCTTTCAAGAGCCA CGGAACTAGAGGCGTTGATAATGAAAGGCTGCAGGAGACTGGAGAAAATTCCGGAAAACGACAGCCCTTCCAGAATCCAG ACTCAGGCGACGCCCGCAAATCATATTGACGCTTCCCAGAGCAGTAAAGCCACTAACTTCTCTCGCAAACCTATCCATAG AGGGGAGAATACACATCGAGTTAACGCATCTCAAGGGTAA |
| AA seq | Len:680 aa MDSSAASPSDKKRYDVFLSFRGKETRRGIVSHLHNALVGRVDDTFKDDETIEIGDTISEEIKEAIRNSKFAIVVISKDYV SSTWCLNELQMIMDLHKKKQLLVLPIFYDVVPSDVKHQRGTFSLRRYQPSMVMRLLSSKERTMAAHVRKWRKALTRVGGI SGKESRVCKDEATMVDDIVEHIARELTSMHPLEMSDIVGMDAHMEQIEPLLDMDSATNEVRMIGIWGMGGIGKTTIAKCL YNKYSPRFGRRFCFIENIRNAGKNGLPGLQRELLSKILGKKQANISDKEKGCTLIKSKLKKLKVLLVLDDVDNVEPLLAL AKETSWFGPGSRIIITTRDLGLLHFCRLRIVHHVNFLGHDDSIRVFKQVAFDGGRPPSDVYEQLSIRASKLAQGLPSALD TFGTYLRQKISTEAWERALDILEKFPPQSIMEIVRTSYEGLDKRDQAVFLHLACLFNGDNFHRVATLFDHGDERIKDLRK KSLIDISPDGCITMHVLVEQAGREIVLQESKSKLWRRRILWEPEEIVSVLQNTTGIALATTEGVSLHMCDMPRMVSIDGG ILNAINNLEYFMAFTHLNNIESTLNFNQGLGQLKRLDVTGSKNLIEIPDLSRATELEALIMKGCRRLEKIPENDSPSRIQ TQATPANHIDASQSSKATNFSRKPIHRGENTHRVNASQG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |