Names & Information
Knowledge of BnaC06G0320600GG:
| Gene Name | BnaC06G0320600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g27830D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:4503 nt ATGAAGTGGAAGCAAGCTTTGACCAATGTCGCAAATATCCTCGGATACCATTCTAAAAACTGTGATAGTGAAGCTGCAAT GATTGAAGAAATCTCCAATGATATTTTAGGTAAACTTGATGTAACTCCATCGTCTAATGAGTTTGAGGACTTTGTCGGCA TCAAAGATCATATCGCAGAGGTGATATTACTGATGAATTTGGAATCCAAGGAAGTGAAGATGGTTGGGATATGGGGTACT TCGGGAATTGGCAAGACTACTATTGCAAGAGCTTTATTTTGTAATATCTCTAATCAGTTCCAAAGAAGTGTTTTCATAGA CAGAGCCTTCATATCGAAGAGTATGGAAGTTTATGGCCGAGCCAATCCAGTTGACTATAACATGAAGCTGCGCTTGCGGA TGAACTTCCTATCAGAAATCTTGGACAGAAAGAACATGAAGATCGGTGCAATGGAAGAAAGGCTAAAGCACCAGAAAGTT CTTGTCGTTATCGATGATTTGGATGATCCATACGTGTTAGATGCTTTAGCGGGTCAAACCAAATGGTTTGGGAGTGGGAG TAGAATTATTGTGGTTACAACTGATAAGCAACTCTTAAAAGCCCATGGGATTGATTCTATATACGAGGTTGGTCTCCCAT CCGATGAACAAGCTCTAGAGATGTTCTGTCGATCTGCTTTCAGGCAAGACTCTCCACCTGATGGTTTGATGGAGTTTGCT TCCGAAGTTGTGGAACGTGCTGGTAGTCTTCCTTTGGGTCTCGACGTTTTGGGTTCGTCTTTGCGGGGGTTGAACAAGGA GGATTGTTTGAATATGCTGCCTAGGCTTAGAAGAAGTCTAGATGGTAAAATAGAGGAGACACTAAGAGTCGGTTATGATG GGTTACTTGGAGAAGATAAGGCGATATTTCGGCATATTGCATGTCTTTTCAATCGTGTAGACGTCAAAGACATCAAGCTG TTTCTTGCTGATAGTGAGCTGGATGTTGATATAGGGCTGAAAAACCTAGTTAACAAGTCCCTCATTCAGGTGAGGTGGGG TAAAGTGGAGATGCACCATTTGCTACAAGAAATGGGTAGAAACGTGGTTTGGTTACAGTCCATTAAAAAACCTCAAAAGC GGGAATTTCTAGTGGATTCAAAAGATATATGTGATGTACTCAGTGAAGGCATTGGTACTTCAAAGCTCTTAGGGATATCA TTAAATGTTGATGAGATTGATGAGTTACAAGTACATGAGAGTGCCTTCAAAGGGATGCGTAATCTCCATTTTCTAGAAAT TTACTCGAACAAAGTTAGGTTTGTAAATGGAGACAAACTGAAGCTGCCCAAAAGCTTCGACTGGTTGCCTCCTAAGCTCA AACTACTGTGTTGGTCTGGGTATCCAATGCGATGTATGCCTTCTACGCTTTGTACAGATAGGCTCGTCAAGCTTAAAATG CGGAATAGCAAGCTAGAGAGGCTGTGGAAAGGAGTTATGTCTCTTACATGTCTCATTGAGATGGATTTGTGTGGATCACA TGACCTGAAAGAAATCCCAGATCTTACGACGGCCACCAATCTTGAAACACTTAATCTTCAATCGTGTAGGAGTTTGGTAG AACTTCCTTCCTCAATACGAAATCTCAATAAACTGATAAAATTGGACATGCAGTTCTGTAAAAAGCTGAAGACTCTCCCA ACTGGCATTAATCTCAAATCTCTCGACCACATCAATCTCAGTTTCTGCTCACAGTTGAGGACATTTCCCAAAATCTCAAC CAACATCTCATATCTCTTTCTTGAGGAAACATCCGTGGTAGAGTTCCCCACTAATTTGCATCTCAAGAATCTTGTTAAGC TTCACATGTCAAAAGTAACGACAAATAAACAATGGAAAAAAGTGCAGCTGCTTACACACTTCATGCCTATGTTGTCTCCC ACTTTGACGGAGTTGTATCTCTTCAATATCCCAAGTTTAGTGGAGCTTCCTTCCTCGTTTCGGAATCTCAACAAACTAAG AGATTTGAAGATTAGTAGATGCACGAATCTTGAAACTCTTCCCACAGGCATCAACCTCAAATCTCTCAAGAGCCTCGACC TCACTAAGTGCTCAAGGTTGATGACTTTTCTTAATATCTCAACCAACATCTCAGATCTCAATCTTAGCTACACAGCGATA GAAAAGGTTCCTTGGTGGGTCGAGATCTTCTCTAAGCTCAGAAGCCTAAATATGGAAAGTTGCAGTAAGTTGGAATATGT ACACCCAAACATTTCCAAACTGCAACGTCTTGATGTTAACTTTTCACACTGTGAGGCGCTGAACAAAGCTGATTTGAGTA ACCGAACTTCGTCAAGTGAGTTGATAACGGAAGCATCTAATAGTGACACAGTCCGAACTTGGTCAAGTGGGTTGATAACG GAAGCATATAATCCGCCTGAGAACGAACTTGCTGATCCAGAATCTCTTCCACATGTTTGTAAAGCCGGAAAAGATGATAT GTTTCGTGATGAATGCCACAAGACTGAACTAGGTGAAGAATGTGGAGGCAGCGATGTAGAGATAGAACACAATGAAAAAT GTGGAGGCAGTGATGCAGAGATGAAGGGTAGCAACAAAACAGTCCAGGTATGCATTAAGGATGAGACTGAATGTGGAGAC AACATTGTGGAGAGAACGGAAAGCAGGAAGGGAATGGGAATGAAACCCAGGAGGAGCAAATCAATGGCAGAAGGTGGAGG AAGAAGAATAGGATCAGTAAAAGCCGCCATTAACATGTACGGACAAAGAGCTACTCGAACCGTCTCTCCTCAGCTAGATT TGCCAGAAGCCAAGTCTGTTGCAGAGGACTTGCATAAGTCAGGGAGAGAGCTTGGTATGTACAGAGAGAGCAGAAAGGCT TCTGACTCTGCAAAGGCCAAAGCAGAAGCTGAACTAAGCAAGGCCAAGAAGACAGCGCAGGAGCTGACTTTACTCATAGA GCAGTCAAATCTCCGGTTAAAGTCCGTAAAGAAGTTAAAGATCGATGGAAACGGTAACTACGCTCAGATCATTAGAGAGT TGGAGGATGTGAAGCAAGAACTGAGCAAGCTCAAGCTCGACGCAGCCTATGTTTTAAAAGAGAAAGTTACTGCGGAGAAG GAAGTAATGGAGTTGGGGGCTAAAACGGAAGAGGATTTGAACTTGGTTGAGAGTCTTATGCTTGAGGTCGATGCTGCGAA CGAAGAGCATGTTTTGGTTGAGTTGGCGAAGATGGAGGCTTTGAAGGAATGCAAAGAGGTGGAAGAGGAGAGAGAGAGGG AAAAGAAGGAAGCGTTAGAGGAATTGGAGAAGATGAAGAAGAGGACGAAGGAGATGAAGAAAGAGATAAAGAGATCAAAG GAGTATGAGAATGTGTTGTCAGAGACTTTGGCTGATATCGAGATGTTGGAAACGCAGTTAAGCCTTGTTAAGGACATGGA GAGGAAGGCTCCCAAGAACCAAAGAGGGAAGAAGGACGCTTTGACGGTTTTGAGAGAAGTTACGAAAGAGACGGAAGCTA AGAAGGAGGAGCTCGCTTCTCTTAACGCGGAGCTTCTTTATCTCGGCGGTATAATGGATGCGTTGAGTAAAGAGCTTGAG GAAGTTAAACGAGAAGCGGCTCGGTTTGAGAAGGTTATACGAAAGGATGATGAAATGATTGAGAGACTCAATACAAAGCT GCTTATGGCGAAAGGTAGACTAGAAGCAGTGTCTGCAGATGAAGAAAGAATCAGCTCTCTTGCTGATAACTTAATCTGCT CTTTAGAGAAGTTAAAGAATGATAAAGAAGCTGCGAAGAAAGAAGAGGTTGAACTTAAAGAAGAGGCGAGGATCATCAAG AAAACCGAAATCGGATTCGGCGGGAAAGAGAAAGAGTTGATATCCAAGTTAGATGAGCTGGAGAAGGCGAAACGAGCAGA GAGTTTAGCACTAGAGAAGCTTGAATCAATGGTAGAGAGAACAGTGGTAACCAGAGAAATGGATTCTCAGAGTAGCTCAA CCATCACAATCTCTAGATTCGAGTACGAGTATCTGAGTGGACAAGCGCGTCACGCTGAAGAAACCGCAGAGAAGAAAGTG GAAGCAGCAATGGCGTGGGTGGAAGCGCTGAAGGCAAGCACTAAGGAGATTGTGATGAAGACTGAGACTCTAGAGAGGGA GAGTGGGAAAACGATGGTGGAAGAGGAGAGGGCGTCGTTTAGGATGCAGAGGTCGCTGTCGATAAAGAGACTGGTGCAGA ACGAGATTGAGAAGTTCAAGGAGGAATCATCAGAAGACAAAAGCAGCAGCTTGGTGGTCTCTTCTTCTCCTAAACCGGTG AGAAAGTCAGTGAGGATTAGTGGGAGGTTTACTCCGGTTCAGGGAGGGAAGACGAGGAGATACTCTTCGGGAAACAGAGG GACGACTCCGAGTTACTTTGTAATTAAGAAGAAGAAGAAGAAAGTTCCGAACTTGGTTAAGTTTTTTAGCCGGAAGAGAG ATAAGTCGTCTTTAGAGCAATAA |
| AA seq | Len:1501 aa MKWKQALTNVANILGYHSKNCDSEAAMIEEISNDILGKLDVTPSSNEFEDFVGIKDHIAEVILLMNLESKEVKMVGIWGT SGIGKTTIARALFCNISNQFQRSVFIDRAFISKSMEVYGRANPVDYNMKLRLRMNFLSEILDRKNMKIGAMEERLKHQKV LVVIDDLDDPYVLDALAGQTKWFGSGSRIIVVTTDKQLLKAHGIDSIYEVGLPSDEQALEMFCRSAFRQDSPPDGLMEFA SEVVERAGSLPLGLDVLGSSLRGLNKEDCLNMLPRLRRSLDGKIEETLRVGYDGLLGEDKAIFRHIACLFNRVDVKDIKL FLADSELDVDIGLKNLVNKSLIQVRWGKVEMHHLLQEMGRNVVWLQSIKKPQKREFLVDSKDICDVLSEGIGTSKLLGIS LNVDEIDELQVHESAFKGMRNLHFLEIYSNKVRFVNGDKLKLPKSFDWLPPKLKLLCWSGYPMRCMPSTLCTDRLVKLKM RNSKLERLWKGVMSLTCLIEMDLCGSHDLKEIPDLTTATNLETLNLQSCRSLVELPSSIRNLNKLIKLDMQFCKKLKTLP TGINLKSLDHINLSFCSQLRTFPKISTNISYLFLEETSVVEFPTNLHLKNLVKLHMSKVTTNKQWKKVQLLTHFMPMLSP TLTELYLFNIPSLVELPSSFRNLNKLRDLKISRCTNLETLPTGINLKSLKSLDLTKCSRLMTFLNISTNISDLNLSYTAI EKVPWWVEIFSKLRSLNMESCSKLEYVHPNISKLQRLDVNFSHCEALNKADLSNRTSSSELITEASNSDTVRTWSSGLIT EAYNPPENELADPESLPHVCKAGKDDMFRDECHKTELGEECGGSDVEIEHNEKCGGSDAEMKGSNKTVQVCIKDETECGD NIVERTESRKGMGMKPRRSKSMAEGGGRRIGSVKAAINMYGQRATRTVSPQLDLPEAKSVAEDLHKSGRELGMYRESRKA SDSAKAKAEAELSKAKKTAQELTLLIEQSNLRLKSVKKLKIDGNGNYAQIIRELEDVKQELSKLKLDAAYVLKEKVTAEK EVMELGAKTEEDLNLVESLMLEVDAANEEHVLVELAKMEALKECKEVEEEREREKKEALEELEKMKKRTKEMKKEIKRSK EYENVLSETLADIEMLETQLSLVKDMERKAPKNQRGKKDALTVLREVTKETEAKKEELASLNAELLYLGGIMDALSKELE EVKREAARFEKVIRKDDEMIERLNTKLLMAKGRLEAVSADEERISSLADNLICSLEKLKNDKEAAKKEEVELKEEARIIK KTEIGFGGKEKELISKLDELEKAKRAESLALEKLESMVERTVVTREMDSQSSSTITISRFEYEYLSGQARHAEETAEKKV EAAMAWVEALKASTKEIVMKTETLERESGKTMVEEERASFRMQRSLSIKRLVQNEIEKFKEESSEDKSSSLVVSSSPKPV RKSVRISGRFTPVQGGKTRRYSSGNRGTTPSYFVIKKKKKKVPNLVKFFSRKRDKSSLEQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |