Names & Information
Knowledge of BnaC06G0394400ZS:
| Gene Name | BnaC06G0394400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g34000D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2046 nt ATGGCTTCCTCTTCAACTTCTCAAAAAGACTACGATGTCTTCCTCAGCTTCCGAGGGACAGATACACGCCACAACATCGT CAGCCATTTGCACAAAGCACTTGTTGACAATGGAATTCGTACCTTTAAAGACGATAGGGATCTCGAAGATGGCAACATCA TTTCCGACCAACTTGTCAAGGTTATACAAACTTCTTTGTTCGCTGTGGTTGTTCTCTCTGAAAACTACGCTACTTCAAGC TGGTGTTTGCAGGAACTCCGACAGATAATGGAGCTTCGCAATGAGGAGAAGATCCATGTCGTTCCCGTCTTCTACAAAGT AGAGCCTTCTGACGTGAGACATCAAAAAGGAACCTTCGAGGCTGCGTTTCAGCGACACAGTGATCAAAGGAAGATTCTCG AATGGAAAGGAGCTCTCACCCAAGTTGGCAATCTGTCAGGCAAGCATTCCAGGACATGCAAGGATGAAGCAACGATGGTA GCCGATATAGTTGGAAATATCTCAAGCCCACTGCTAAAGGTGAAGCCTGCAAATTTGATCAATCAAGAGAATTTAGTTGG GATGGAAGCACACATGGTGAACCTGAATCTCCTTTTGAATATGGAGTCTGAAAATGAGGTTCTCATGATAGGAATATGGG GTATGGGAGGCATAGGCAAAACCACCATTGCTAAGTGTCTCTATGATCGATTTTCAAGTCAATTTCCAGTTCATTATTTC ATAGAAGACATTAAGAAGGTTTATAAGAACAAGAGTCCATCCTACTTACAGGAAAGATTCCTCGCCAACATCCCCAGTGG TAAGAAAAATCGTTTCCTTGAAGGAGGATCCAACAATGAGATAAAGGAAAGACTAGGGAACAAAAAAGTATTCATTGTGC TTGATGGTGTGGATAAAGCGGAGCAGATACATGCACTGGCCTGGTTTGGTTTAGGGAGCCGAATAATCATAACTACACGT GCCATGGGTCTGCTCACCTCCTGCAGAGTAGACAATGTATATGAGGTTAAATGCTTGGAGGATAATGATGCCCTCCAGGT CTATAAGAAGTCAGCCTATGGAGGAAGAGCGCCTCCTTCTGATGGCTTTGAGCAACTCTTCATTAGAGCGTCTCAGCTAG CTCACGGCCTTCCCTCTGCCCTAGTGGCTTATGCCACATATCTCAGTGAAAGCACAACCATAGAGACGTGGGAAGAAGAA CTACGTTCACTTGAAGCAAGGCCACACAAACGTGTCGAGGAGATTCTGAGAATTAGCTACAATGATTTAGATGAACTTGA CAAAACAGCTTTCCTTCATGTTGCCTGTCTCTTTAACGGATACCTTTTTAACCATGTCACTTCCCTTCTTGATGAAGGTC GTCCTAGGATGAATCATTTAAATGCAAAGTCTCTCATCAGCATATCGACAGATGGATGTATAAACATGCATTGCTTGGTT GAACAAACAGGAAGGGAAATCGTGCGCCAAGAATCCGGGAACAGGCCTTCTAAACAAAGGTTTCTATGGGATCCTAACGA GATATATGATGTACTGAACAATAATATAGGTACGGATCAAAATGAAGGTGTGACACTGCACATGTGTGATATGCTTCGCA CATTATTTATGAGTGATGAAGTATTTAGCAACATGCGTTTTCTAAACTTTTTCAAGTTCTTCCAGCACTTGGGTGATATA GAATCCAAGGATGCATATCCGTTGGAAAAGTTGCCATATAGGTTCCAGCACCACAATCTGGTGGAACTCAATCTCCGATA CAGCAACCTCGAGAGTCTATGGAACGAAGCTGTAGATCAGAAGCTCTGGAAGCTGCGGAGACTAGATGTGACCGGTTCGA GGAATCTAATAAAGCTTCCAGATCTTTCAACAGCCGCGAATTTTGAGGAATTGATAATAGAAAGCTGCATGAGGCTACAG AACATCCCAGAGTCGATAAGCAGATCACATAATCTCAAAAAACTCAACGCAATCAACTGTGATCTCCTTAGGGGCGTAGA CAGACGGGCAGCTGGCGAACCATGTTACAGTTTCAGAGAGAAATAG |
| AA seq | Len:682 aa MASSSTSQKDYDVFLSFRGTDTRHNIVSHLHKALVDNGIRTFKDDRDLEDGNIISDQLVKVIQTSLFAVVVLSENYATSS WCLQELRQIMELRNEEKIHVVPVFYKVEPSDVRHQKGTFEAAFQRHSDQRKILEWKGALTQVGNLSGKHSRTCKDEATMV ADIVGNISSPLLKVKPANLINQENLVGMEAHMVNLNLLLNMESENEVLMIGIWGMGGIGKTTIAKCLYDRFSSQFPVHYF IEDIKKVYKNKSPSYLQERFLANIPSGKKNRFLEGGSNNEIKERLGNKKVFIVLDGVDKAEQIHALAWFGLGSRIIITTR AMGLLTSCRVDNVYEVKCLEDNDALQVYKKSAYGGRAPPSDGFEQLFIRASQLAHGLPSALVAYATYLSESTTIETWEEE LRSLEARPHKRVEEILRISYNDLDELDKTAFLHVACLFNGYLFNHVTSLLDEGRPRMNHLNAKSLISISTDGCINMHCLV EQTGREIVRQESGNRPSKQRFLWDPNEIYDVLNNNIGTDQNEGVTLHMCDMLRTLFMSDEVFSNMRFLNFFKFFQHLGDI ESKDAYPLEKLPYRFQHHNLVELNLRYSNLESLWNEAVDQKLWKLRRLDVTGSRNLIKLPDLSTAANFEELIIESCMRLQ NIPESISRSHNLKKLNAINCDLLRGVDRRAAGEPCYSFREK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |