Names & Information
Knowledge of BnaC06G0394600ZS:
| Gene Name | BnaC06G0394600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | predicted protein [Arabidopsis lyrata subsp. lyrata] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3498 nt ATGGAGTTACCTCGTCCTGTGAGGCAGTACGATGTGTTCCTCAGCTTCCGAGGAGAAGACACTCGCAAAGGCATCGTCAG CCATTTGCACGGAGCATTTCGCCGCAAGGGAATAGAAAAAATATTCAAAGACGATAAAACACTCGAGATTGGAGACTCCA TTTCCGAAGAAATCAAGGAGGCTATACATAATTCGAAGTTTGCGGTCGTAGTTATCTCAAAGAACTATGTTTCCTCCACT TGGTGTCTAGAGGAGCTACGCATGATAATGGAGCTTCACAACGAAAACCTACTCACTGCTGTTCCAGTCTTCTACAACGT TGTTCCATCCGATGTAAGACACCAGAAAGGAACCTTTTCTTTAGAAAGGTACGGATGTTCAAGAATCATGCTACTATTTT CCAGCAAGAAAAGAACAATGGCGGCAAAGGTTCAGAAGTGGAGAGAAGCTCTCACTGCGGTCGCAGATGCATCAGGCAAG GATTTGAGTAAATGTGAGGACGAGGCCACGATGGTTGCGGATATTGTTGGGAAAATTTCAGATCAGTTGTTCTCAATGGA GCCACTAGATTTGAGCCATATCGTAGGGATGAACGTTCACATGGAACAGCTGAGTCCTCTTCTGAGTGTGGAATCTGAGA AAGAGGTTCGTGTGATAGGAATCTGGGGAATGGGAGGCATTGGCAAAACCACCATTGCCAAGTATCTCTACGAAGAATAT TCACGTCAGTTTGATTCATCCTGTTTCATTGAAAACGTTAGGATCTTGGCACAGAATGGCCTACCGTATTTACAGGAAAA GCTTATTTCCATTCTCCAAGGCCAAAAACAAGAGACCAGCTTCTGGTGCGTGGAGAAGGGTTACAACTCTGTCAAGTCCA ACCTTAAGGGTAAAGTTTTCGTCGTCCTCGACGATGTGGACAACTTGGACCAGCTCCAGGCCGTGGCGAAAACGATTGAC TGGTTTGGAGCAGGGAGCAGAATCATCATAACTACAAGAGACTTTGGATTGCTCTACTCCTTTGGAGTAAGACTATTATA CCATGTTAGCTTTTTGGACAGCAATGATGCCATCCAAGTCTTTAAACAAGCTGCTTTTGAACGAGGGCAAGCTCCTTCTG ATGTCTACCACCAATTCTCAATCCGTGCTTCTAGGCTTGCTCAAGGCCTTCCTTCAGCCCTCGATGCTTTCGGCACATAT CTCCGCCGGATTACATGGATAGAAGGGTGGGAAGATGCATTACGCATTCTTGAAACAATTCCTCATCAAAGTATCATTGA TATTGTGGATACTAGCTACAGAGGTTTAGACGACAAAGAAAAATCTGCGTTTCTTCACGTTGCATGCCTCTTCAATAGAG ACTCTCTCCAGCGTGTAAATGACCTTCTCGTTGATGGTGCTCTAAGGACAAACGCTTTAGAAGCGAAATCTCTCATAGAA ATATCACCTGTAGATGGATGCATCACCATGCACCTCTTGATAGAACAAGCAGCAAGAAATATTGTGCTCCGAGAATCTGG CTTCTTGCCTTGGAGACAACGAATTTTGTGGGAAACTGATCCAATCATCTCCGTGCTACAAAATAACACAGGTACAACAA CAACGGAAGGTGTAGCACTAAACATGTGTAAAATGCTTCACACGTCGTCTATCAAAGGAAATGTGCTTAAGGATATCAAC AGTCTCACATTCTTCAAGGCCTTCACGGATTTGAATGATATAGAGTCCAAACTGAAGTTCATTCCAGGCACAGATATGCT TCCCAGCAAACTCAGGTTACTACATTGGGATGCTTATCCTATGAAAAGTTTGCCTCCAGGATACTCTCCGCATTGCCTCG TTGAAATAATTCTGCGTCACAGTAAGCTTGAGCGTCTGTGGGATGGAACCCTGGAACTCGGTCAGTTGAGGATACTAGAT GTTACTGGCTCGAAGAATCTGACCAAAACTCCTGATCTTTCAAGGGCCACGCGACTAAAAGAGTTGATAATGAAAGGCTG TACAGGACTGGAGCAACCTCCAGAGTCCATTGGCGGCCTATCTTGCCTGCGAAAACTCGATTTATCGCATTGCAATGGCT TAAGAAATCTTGTTATCTATATCTCAGAAAAGAGTGTCCTGCCAGAGAGTGGACTTAGGCGACGCCGGCAAGTCATAATG AAGCTTCCCGGAGCAGTAAAGAAACGAACTTCTCTTTCAAACCTATCAATAGAAGGGAAGATACAAATCAAGTGGTGGCA TCTCAGGGGAAACGCAGAGCACCTCTCTTTGATCTCCGAGCAACACATACCTGAAGAATCAATGGTGATGATGCCAAAGG AAAGATTTCCTTTTATCTCAAGCTTCTATGATTTTAAATCTCTCAGCATCAAGCGGTTTAGCTACATTGAGGATGGTGCC TCCTTCGAATGCATTAGCTTCTCAGGCTTCCCTTGCTTGGCGGAGTTGAAACTAATCAACTTGAACATCCAGAAAATCCC TGAAGACATTTGTCGGTTGCGTTCACTAGAGAAACTAGACTTGAGTGGAAATGACTTCACTAATCTACCTTCATCAATGA AGAACCTCTCTAAGTTGAAATACATCAGTCTTTCTAACTGTAGCACGCTCGAGGCGTTGCCGGAGCTGACGGAGGTGCAG ACACTCAAGCTTTCCAACTGTTCCAACCTCACGTCACTGGTGGAACTTTCTCAAGATGTAGGCAGTTACAGTTTGCAAGA GCTTGAGCTAGACAACTGCAAGAATGTTCAGTCATTCTCAAACCAGCTTAGTCATTTCACTAAGTTAACATATTTAAACC TCAGTGGTAATGACTTTGAAGCAATCCCCGCAAGCATCAGAGAGCTACCATCTTTGGTAACGCTCAGCCTCAATAACTGC AAGAAGCTCAAATCAGTGGAAGAGCTTCCACAGAGTCTCAAACATCTCTATGCACACGGATGTTGTTCCCTGGTGACCGT TTCACCGAACCATTCAATCAAACACCTTGACCTTAGCCATTGCTTTAGCCTGCAACAAGATGAGCAACTAATCTCTCGGT TTCTAAACGGCGACAACGTATTAAGATTTCTTTGCTTACCTGGAACTAAAATGCCAAGATATTTTGATAACCAATCACAT GGGATACGTACCAAGATCAGCCAACCTCAGACTAGGTTAACTCCCATGTTTGTAGGCTTCGCTGCATGTATCATGGTTTC TTGCGAGAGGTCGTTCTACCTTCAGTTCCCGACGTTTAGTTATGACTGGAAACGCGACGATGATAATGATGTAATTCGGA TTAACCTCAAACCAAATCTCTATCTTTCTCGGGAGATTGAGGAAGGAGGGAGTGATACACGGCATCACATGGTTATCATC CACGTCCCGTGTAGCATAAACGCCGATAAAATGGAAGAGTTGCGTCTTGAGTCTCATCTTCAACTTCGGGAGGAGCAGTT TCAGTTTCCACCGGGCGAGATAAGTGCTTGTGGAACGCGAATAGTTGCAGAGGAGTGA |
| AA seq | Len:1166 aa MELPRPVRQYDVFLSFRGEDTRKGIVSHLHGAFRRKGIEKIFKDDKTLEIGDSISEEIKEAIHNSKFAVVVISKNYVSST WCLEELRMIMELHNENLLTAVPVFYNVVPSDVRHQKGTFSLERYGCSRIMLLFSSKKRTMAAKVQKWREALTAVADASGK DLSKCEDEATMVADIVGKISDQLFSMEPLDLSHIVGMNVHMEQLSPLLSVESEKEVRVIGIWGMGGIGKTTIAKYLYEEY SRQFDSSCFIENVRILAQNGLPYLQEKLISILQGQKQETSFWCVEKGYNSVKSNLKGKVFVVLDDVDNLDQLQAVAKTID WFGAGSRIIITTRDFGLLYSFGVRLLYHVSFLDSNDAIQVFKQAAFERGQAPSDVYHQFSIRASRLAQGLPSALDAFGTY LRRITWIEGWEDALRILETIPHQSIIDIVDTSYRGLDDKEKSAFLHVACLFNRDSLQRVNDLLVDGALRTNALEAKSLIE ISPVDGCITMHLLIEQAARNIVLRESGFLPWRQRILWETDPIISVLQNNTGTTTTEGVALNMCKMLHTSSIKGNVLKDIN SLTFFKAFTDLNDIESKLKFIPGTDMLPSKLRLLHWDAYPMKSLPPGYSPHCLVEIILRHSKLERLWDGTLELGQLRILD VTGSKNLTKTPDLSRATRLKELIMKGCTGLEQPPESIGGLSCLRKLDLSHCNGLRNLVIYISEKSVLPESGLRRRRQVIM KLPGAVKKRTSLSNLSIEGKIQIKWWHLRGNAEHLSLISEQHIPEESMVMMPKERFPFISSFYDFKSLSIKRFSYIEDGA SFECISFSGFPCLAELKLINLNIQKIPEDICRLRSLEKLDLSGNDFTNLPSSMKNLSKLKYISLSNCSTLEALPELTEVQ TLKLSNCSNLTSLVELSQDVGSYSLQELELDNCKNVQSFSNQLSHFTKLTYLNLSGNDFEAIPASIRELPSLVTLSLNNC KKLKSVEELPQSLKHLYAHGCCSLVTVSPNHSIKHLDLSHCFSLQQDEQLISRFLNGDNVLRFLCLPGTKMPRYFDNQSH GIRTKISQPQTRLTPMFVGFAACIMVSCERSFYLQFPTFSYDWKRDDDNDVIRINLKPNLYLSREIEEGGSDTRHHMVII HVPCSINADKMEELRLESHLQLREEQFQFPPGEISACGTRIVAEE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |