Names & Information
Knowledge of BnaC06G0394700ZS:
| Gene Name | BnaC06G0394700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g34040D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1422 nt ATGACTCCCCAAGTGTTCGTGAGTTTTCGAGGGGAAGATACGCGAAAAACTTTTGTGAGCCATCTCCTTAGCTCGTTCAA GACCAGTTGCATCACAAGTTTCATAGCCTCTGAGCCTTTAGAGGCCACGGATCATGAGGCTATGGGAAAGTCGCTAGTTT CAGTCCCCGTTATAACAAAGAGCTACTCGGTTTCGGAATGGATGGTGAAGGACCTTAGCAGGATGATAGAGTGTGAGAAG ATAGGAACTTTGAGAGTAGTTCCTATCTTCTTCCAAATTAGTCCTTTGGATATCTTAAGTCACGTAAAAAAATACGCGAA AGTGCAGGGTGGGAACTTGGAGATGGTGAGAAAATGGCTGACTGCTCAGGTGTCTCGTAAACCTAGCTTCCATTCCAGTG ACTGGGAGGACGACTCAGAGCTGGTGGATAAAGTGACTGAATTCGTTTCTAATATCCTGAAATCTTCCGGGCCAAGCTAT TATAGTACTGGTTTAGGTCCGGTTCGGAGTTTGAAGCTAGAGAATGAGTTCAGATTAACTCCCACGACCACATGTGATAT TGAAACTAACCAGAGATCATTCCCGCTCAGCTTTCGTTTTACGCCCTACGACTCCACTTACTTGTCGATTATGTACACGA AGCTTCGCCTAGCAAAGTTGCGTGGTTTAGTACAGGCTGTACAGCGTGCAGAGTCAGGTATAATTGGTATCTGTGGAGTT GAAGGTGTTGGGAAGACAACTCTTGCAAGGGCCCTTTACGAGGAGATCTCACCAAGATTTCAGCACCATTATTCTACCAA TATTTTCAAAGACGACAAAATATCGTTCCTGTGCCCACCCAGTTCACTGCAGGTGCAACCTATAGAAAGGTATAAGAAAC TTAGCTCCGACAAGGGCATCAAAGAACTGATGGGACACCGCAAGGTTCTGCGTGTTGCTGATGGTGTAGATGACATTAAT CAGCTAAGAGGTATAATTCAAGATGCTAGTTGGTTTGGACCAGGAAGTCTAGTCATTGTGATCACACAAGACAGGTCTTT GCTTACTCAATGTGGAGTAGAACACATCTACGAGGTTGAGTCTCCAAGATACGAGGAAGCTCTTGCTTTCTTCTCAGAGT TTGCTTTCAAGCAGAGCAGCCCTCTCCCCGGTTTCGAAAGTCTCTCCTTCCAGGCTGTACATTTGGCGAATCGTCTTCCT CTGGCCCTCAAAGTGTTGGGGTCGTTTCTACACGATAAGGGAAAAGATGAATGGGTAAGTACATTGCGTGGACTGGAAGC GTCACGTGATAACTATGCTTCGGAGGTTAATAGGTACCTAAGAGCAGATAACTATGCACCAAGGCGTCCGATCAAAGTGG ACAATCACATTGGAGTAGATGAAGCAAACTGTTTCCCGCTATATTGCTTGGCTCTAGAATGA |
| AA seq | Len:474 aa MTPQVFVSFRGEDTRKTFVSHLLSSFKTSCITSFIASEPLEATDHEAMGKSLVSVPVITKSYSVSEWMVKDLSRMIECEK IGTLRVVPIFFQISPLDILSHVKKYAKVQGGNLEMVRKWLTAQVSRKPSFHSSDWEDDSELVDKVTEFVSNILKSSGPSY YSTGLGPVRSLKLENEFRLTPTTTCDIETNQRSFPLSFRFTPYDSTYLSIMYTKLRLAKLRGLVQAVQRAESGIIGICGV EGVGKTTLARALYEEISPRFQHHYSTNIFKDDKISFLCPPSSLQVQPIERYKKLSSDKGIKELMGHRKVLRVADGVDDIN QLRGIIQDASWFGPGSLVIVITQDRSLLTQCGVEHIYEVESPRYEEALAFFSEFAFKQSSPLPGFESLSFQAVHLANRLP LALKVLGSFLHDKGKDEWVSTLRGLEASRDNYASEVNRYLRADNYAPRRPIKVDNHIGVDEANCFPLYCLALE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |