Names & Information
Knowledge of BnaC06G0395000ZS:
| Gene Name | BnaC06G0395000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein CARUB_v10019685mg [Capsella rubella] |
| Best Hit (SwissProt) | Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana GN=At1g72960 PE=2 SV=2 |
| NT seq | Len:3489 nt ATGTCTTCTTCTATTACACCAAGCACCTCCCTTCGGAAGTACGATGTCTTTCTGAGCTTCAGAGGACTCGACACTCGCCG CAGCTTCATCAGCTTCCTCTACAAAGAACTCGTCCGAAGGAACATCCGCACCTTCAAAGACGACAAGGATCTCGAGAGCG GCCGGAAGATTTCGCCGGAGCTAGAACGCGCCATCGAGGAGTCGAAGTTCGCCGTCGTCGTGATCTCCGCGAACTACGCA GCCTCCACTTGGTGCCTCGAAGAACTCGTCAAGATCATGGATGTCGAGAATAAAGACTCCCTCACCGTGATCCCCGTCTT CCACGGCGTTGACCCGTGTCACGTGAGGCGGCAGATCGGTCAGGTCGCCGTACAGTTAGAGAAGCACGAGAAGAGAGAAG ATCGCGAGAAAGTCCTCTCGTGGAGACAAGCGTTGACCAATCTTGCGAGTATCTCCGGCGTCTGCACATTGAAATGGGAA GATGACTCGATGATGGTCGATGAGATTGCTAAGAGGATATCAACGTTGATTGATACAACGAGAAAACCAACAAGAACCGG AAGCAACCTAGTGGGGATTGATGCGCACATGAAAGCTCTGTCACGGTTACTAGATCTGAACTCGAAGAAGAATGTGAGAG TTGTCGGGATTTGGGCGAGAGGAGGCAACGGTAGATCAGCTCTCGCTAAGTTCGTGTACAGGAACATCTGCCAACACTTC GAAAGCCATTGCTTCCTGGAGAACGTGAAGAGGATATCTCAGGATCGGCACATGTCGCATCTACGCCAAGAGGTTCTTAA AAGGGTCCAAGTAGAATCGAATTCGAACCAGAAGGTTCTGCTAGTGGCGAACGAAGTTAACGAACTTGAACACTTTGATG CTCTTGCAGAGGATTTCAGCTGTTTTGGTCCGGGGAGTATAGTTATCATCACTACACAAGACAAGCAGCTTCTTGTTTCA GCCGGTATAAAGCTTGTTTACGAAGTAGAGCTTCTGAGGTTCAGGAAAGTTCGTGAACTATTCAGACAATTAGCCTTCAG AGACAGAGCCTTTTCTGCAGCTTTCGAGTCGGTTTTGTATAGGGGAACAAATCTTGCAATGGAATGGTTAGGTTGTCTAG GTGTTAGATCTGATTCAAGCGATGGGTGTTGTTCTGTACAGCTTATTGATGGAGATGGTATATACAATGTCTCTGGCATT GATCATTTCATTAAAGAGGTGAAACTTGGAGAGTGTGGCCTCTCTTATGCTGTTGTCTCCATCATGGGTCCTCAAAGCAG CGGGAAGAGTACACTATTGAATAGTTTGTTTGGAACAAACTTCATGGAGATGGATGCATTTAAGGGAAGGTCTCAGACCA CAAAGGGTATCTGGCTTGCAAGATGTGCTGGTATAGAGCCTTGTACACTTGTAATGGACTTAGAAGGCACAGATGGAAGG GAGAGAGGAGAGGATGATACTGCATTTGAGAAACAAAGTGCTCTTTTCGCTCTTGCTATCTCGGATATCGTCTTGATCAA CATGTGGTGTCACGATATTGGCCGTGAACAAGCTGCTAATAAACCTCTCTTGAAAACTGTCTTTCAGGTTATGATGAGAT TGTTTAGTCCACGCAAAACAACAATGCTGTTTGTAATAAGAGATAAAACCAGGACGCCACTGGAGAACTTAGAGCCTGTC CTAAGAGAAGATATTCAGAAGATATGGGATTCTGTTCCAAAGCCTGAAGCACACAAAGAAACTCCTATGAGTGACTTCTT CAATGTTGAAGTTGTTGCTCTTTCCAGTTATGAGGAGAAGGAAGAACAGTTTAAAGAGCAGGTTGCTAGTTTGAGACAAC GGTTCATGCATTCTATTGCACCGGGTGGTCTTGCTGGAGACAGAAGAGGAGTAATTCCAGCTTCAGGTTTTGCATTTAGT GCAGATCAAATCTGGAGAGTTATCAAGGAGAACAAAGATCTTGACCTTCCTGCCCACAAGGTCATGGTAGCTACCGTGCG GTGTGAAGAAATTGCAAATGAGAAGTTTTCTCATTTCATTTCTAACGAGGACTGGCGAAAACTTGATGAGGAGGTGCAAG CTGGTCCAGTTTCTAATTTTGGAAAGAGGCTTACTTCTATTCTTGGTTCTTGCTTATCTGAATATGATGGGGAGGCTACA TTCTTTGATGAAGGTGTCAGATCTTTAAAGAGACATCAACTTCAAGAAAAGCTTCTCCAACTAGTGAATCCAGCGTTTCA AGATGTGTTAGGACACATAAGATTTGGGATGCTTGAAAAGTTTAAGGCTTCTTTTGATAAAGCTTTAGAGATTGGAGAAG GCTTTTCTTCAGCTTCCACTACTTGGTTCAAGTCTTGCATGGCTCAATTCGATGAAGAGTGTGCAGGTGCCATCGTTGAA CAAGCCGATTGGGACACAGCTAAAGTACGTGACAAGATTGTCCGTGACATAGAGGCTCACATTTCCTCTGTGAGGACTTC CAAGCTATCTGAACTTACAAGCCAGTACGAGTCCAAGCTTCATGAAGCATTGTCTGAACCAGTGGAAGCTTTGTTGGAAG GAGCTAATGATGAGACGTGGAGAACAGTAAAGAAGCTACATAGGCGTGAAACTGAATCTGCTGTCTCTGGATTCAGTAGT GCATTAGCTGGTTTTGACATTGAAGAAGAGATGAGAGACAAGATGGTGAAAAGCCTTCAGGAGTATTCGAGAGGTGCCAT AGAGTCTAAGGCAAAGGAAGAAGCAGGAAGGGTCTTGATGCGCATGAAAGAAAGGTTTGGTACAATCTTTAGTCATGATT CTGATTCAATGCCACGTGTTTGGACCGGGAATGAAGATATTCGAGCTATTACTAAAGCAGCTAGATCAGCTTCCTTGAAG TTGCTTTCAGTAATGGTTGTGATCAGGTTGGGTGATGAAACTGATAACATAGAGAAGACACTAACTGTTGCTCTTTTGGA TCCAACAACGTCTAAAAAAAGCATTACAGCATCTGATCCATTGGCTTCAAGCACTTGGGATGAGATTCCATCATCAAGAA CTTTGATCACACCTGTCCAGTGTAAATCTATATGGAGACAGTTCAAGACAGAAACTGAGTATACAGAAGCGAACAAGCGT GGTAGCAACTGGCTACCACCTCCATGGGCAATTCTTGCATTGATCATACTTGGATTCAACGAGTTCATGACTCTTCTAAG AAACCCTCTTTATCTCGGTCTCTTATTTGTCGTTTTCCTTCTCTTGAAAGCACTATGGACGCAACTAGATATCCCTGGCG AGTTCCGCAATGGTGTAGTTTCAGGGCTCATATCTATATCAGCAAAATTTGTTCCCACGGTCATGAACCTTCTCAAGAAC CTTGCTGCGGAAGGCCAAGCTCCTCCTGCAGCTAATCCAGAGAACCGTCGTCCTAGCAACAACACTTCTTCAAATGCTTC CTCGTCAGAACATCCACCAGAGCATAAAAGTTCCTCAAAGACAGATTAA |
| AA seq | Len:1163 aa MSSSITPSTSLRKYDVFLSFRGLDTRRSFISFLYKELVRRNIRTFKDDKDLESGRKISPELERAIEESKFAVVVISANYA ASTWCLEELVKIMDVENKDSLTVIPVFHGVDPCHVRRQIGQVAVQLEKHEKREDREKVLSWRQALTNLASISGVCTLKWE DDSMMVDEIAKRISTLIDTTRKPTRTGSNLVGIDAHMKALSRLLDLNSKKNVRVVGIWARGGNGRSALAKFVYRNICQHF ESHCFLENVKRISQDRHMSHLRQEVLKRVQVESNSNQKVLLVANEVNELEHFDALAEDFSCFGPGSIVIITTQDKQLLVS AGIKLVYEVELLRFRKVRELFRQLAFRDRAFSAAFESVLYRGTNLAMEWLGCLGVRSDSSDGCCSVQLIDGDGIYNVSGI DHFIKEVKLGECGLSYAVVSIMGPQSSGKSTLLNSLFGTNFMEMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGR ERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTRTPLENLEPV LREDIQKIWDSVPKPEAHKETPMSDFFNVEVVALSSYEEKEEQFKEQVASLRQRFMHSIAPGGLAGDRRGVIPASGFAFS ADQIWRVIKENKDLDLPAHKVMVATVRCEEIANEKFSHFISNEDWRKLDEEVQAGPVSNFGKRLTSILGSCLSEYDGEAT FFDEGVRSLKRHQLQEKLLQLVNPAFQDVLGHIRFGMLEKFKASFDKALEIGEGFSSASTTWFKSCMAQFDEECAGAIVE QADWDTAKVRDKIVRDIEAHISSVRTSKLSELTSQYESKLHEALSEPVEALLEGANDETWRTVKKLHRRETESAVSGFSS ALAGFDIEEEMRDKMVKSLQEYSRGAIESKAKEEAGRVLMRMKERFGTIFSHDSDSMPRVWTGNEDIRAITKAARSASLK LLSVMVVIRLGDETDNIEKTLTVALLDPTTSKKSITASDPLASSTWDEIPSSRTLITPVQCKSIWRQFKTETEYTEANKR GSNWLPPPWAILALIILGFNEFMTLLRNPLYLGLLFVVFLLLKALWTQLDIPGEFRNGVVSGLISISAKFVPTVMNLLKN LAAEGQAPPAANPENRRPSNNTSSNASSSEHPPEHKSSSKTD* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | sucrose synthase; K00695 sucrose synthase [EC:2.4.1.13] (A) |