Names & Information
Knowledge of BnaC06G0424100ZY:
| Gene Name | BnaC06G0424100ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g39660D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2892 nt ATGGCTCTGACTTTCCTCTTGGGCGTTTTCTCCTTCATTGTCTTCTGCTTAGGACTACGACGTCTCCTTCACTCTGACAA GAGAAAAAACCCAACGCATCTTCTGCATCATGTAACTTCCACAACTGCTGATGCTTCTCCATCTTTGCAGTCACCCTCGT CCCGCCCTTTGTGGAAGTACGATGTGTTCCTCAGTTTCAGGGGAACAGATGTACGGAAAGGATTCCTCAGCCATCTCTAC AAGGCTCTCACCGACAACGGAATCCACACTTTCCGCGACGATACAGAGCTTCAGCGAGGGAACTTCATCAGCCCTGCTCT CCTCGGAGCCATCGAGCAGTCAAGATTCGCTGTCGTTGTCTTATCCGAGAACTACGCCACCTCTCGCTGGTGTTTACAGG AGCTCGTGCATATCACCAAGTGCGTCAAGAAGAAGCAGATGGAGTTGATCCCTGTCTTCTTCGGAGTTGATCCTTCACAT GTCAAGAGACAGTCTGGAAACTTCGCCAAGGCCTTCGCTGAACACGACAAGAGGCCTAATAAAGATGCTGTGGAGTCATG GAGAAAAGCTATGGCCACAGTGGGATTCATCTCCGGCTGGGATTCAAGAAACTGGAACGAGGAGTCAAAGCTAATAGAGG AGCTTGTTCAGGATCTTTCAGAAAGACTATTCTCACCGGTGTCTACGAGTGATAACGGTGAATGGATCGGGATGAGTACA CACATGAGAAGTATATATCCTTTGATGAGGGAAGACCCTAACGATGTCCGAATGGTTGGAATCTGGGGCATGGGAGGTAT TGGCAAAACCACCATTGCTAAATATATCTACAAAGCCTTCTTGAACAAGTTCGATGGTGCTTGCTTGCTAGAGAATGTGA AAAGAGACTTTAAACGACATGGACCGTCACATTTACGTGAGAAGATCTTGTCTGAAATCTTTCGCAAGAAAGACATGAAC ACATGGAACAAAGATTCCGATGTAATGAAGCAACGGTTACAGGGAAAAAAAGTTCTTCTCGTCCTGGATGATGTTGATGA CATACAACAGCTAGAAGAGTTAGCTGGAAGCTCTCATTGGTTTGGACCAGGAAGTAGAATCGTCATAACTACTAGAGACC GGCGTGTTCTTGACCAGCATGATGTGGAACGCATCTACGAAGTGAAGCCTCTTAGGACTACACAAGCACTTCAGCTCTTT AGCAAACACGCTTTCAAGCAGCCTCGTCCATCCGAAGATTATCGAGAGCTCTCTCTCGACGTTGTGGAGCAGCTCGGTGG TCTTCCACTAGCTATTCAAGTCGTTGGGGGATCTCTATACCGTCGAGAGCTGGAGTTCTGGGAAGACAAGCTGGATTTAC TTAGAAACAACGGCGATAACTCTGTTTTCAAGGCGTTGAAAGTAAGTTATGAAGCGTTGGATGAGATTGAAAAGAAGATT TTTCTTTACGTTGCGGTTTGTTTCAACGGAGTGTATATGGACCGTGTTAGAAAAGTGCTAGACCTTTGTTTCGTGTCTTC CAGGAGAAGAGTGTTACCAACAAGACCGAGCATTGTAGCTCTGATGGAGAAGTGTATGATTAGCTTGTCGAAGAAACGTT TATGGGTTCATGACTTGCTCCAAGACATGGCTGAGGATATTGTATGTGAAGGGAAAGATGAAAGGCCATGGAAACGTTTA ATGCTGTGGGATTTTGAAGATATCAATCACGTTTTTTCCACCAATATGGGAGATGAAGCAATTGATGTTGAAAGCATATT CTTAGACATGTCTGAAGGAAATGAGCTTAGTATTACCCCTGGGATCTTCAAGAAGATGCCAAATCTCAAGCTGCTTAAAT TCTACACTAACTCCAGCGTTGAAGAGAGCAGAACAAGGATGTTAGATGGTCTTGAATACCTCCCTACGCTGCGGTATCTT CGCTGGGATGCTTATCATCTGAAGTCTTTACCATCTCAGTTCTGTACTAGCTTTCTAGTTGAACTCAATCTCTCTCACAG CTCAATAGAAACTGTTTGGAGTGGAAGTCAGCAAGATCTTGGAAACTTACGGAGCCTAAACCTCATAAGGTGCAAGCACC TAAACGAGTTTCCAGATCTTTCAAAGGCAACTAATCTCGAGTCTCTCAAGCTCTCAAACTGTGATAACTTGGTGGAGATC CCTGGCTCCTCTCTTAGACAACTCAACAAACTCGTCCACTTCAAGTTAAGCAACTGCAAGAATCTAAAAAACCTCCCAAA CAACATCAACTTGAAATCCCTCAGGTCTCTACACCTAGACGGATGCTCTAGCCTAGAGGAGTTCCCATTCATCTCAGTGA CCGTCGAGAAGCTGCTGCTCAACAAGACATCTATCCAACAAGTACCACCATCTATCGAACGCCTCACTCGTCTCAAAGAT ATACATCTCTCTGACTGCAAGAAACTGATGAATCTTCCAGACTGTATCAAGAACTTAAAGTTCCTCAACGATCTTGGCCT AGCAAACTGTCCCAACGTTACATCGTTCCCACAAGTTGGAACGAATATAAGATGGCTGAATCTGAACAAGACATCCATAC AAGAAGTGCCGTCGACGATAGGGGACAAGTCAGAGCTACGTTTCTTGAACATGTCTGGATGTGAGAAGCTCGTGAGCCTT CCTCCGACGGTGAAGAAACTGCAACAGCTTAAGTACTTGTACCTTCGTGGCTGCGTTAACGTCACCGAGTCTCCTAACCT CGCTGGGGGAAACACGATGAAGGCTTTGGACTTGCATGGAACATCGATAACAGAGGAACTCGTTGACTCCAACAAGGGAG AAGAGCCTCCTCAGTGTGAAGTGCCAGTGATAAGACGGTTCTTTATGAAGAACGTTCGAGGACGCAGCAAGAAACGCAAA TCCAACAGATGA |
| AA seq | Len:964 aa MALTFLLGVFSFIVFCLGLRRLLHSDKRKNPTHLLHHVTSTTADASPSLQSPSSRPLWKYDVFLSFRGTDVRKGFLSHLY KALTDNGIHTFRDDTELQRGNFISPALLGAIEQSRFAVVVLSENYATSRWCLQELVHITKCVKKKQMELIPVFFGVDPSH VKRQSGNFAKAFAEHDKRPNKDAVESWRKAMATVGFISGWDSRNWNEESKLIEELVQDLSERLFSPVSTSDNGEWIGMST HMRSIYPLMREDPNDVRMVGIWGMGGIGKTTIAKYIYKAFLNKFDGACLLENVKRDFKRHGPSHLREKILSEIFRKKDMN TWNKDSDVMKQRLQGKKVLLVLDDVDDIQQLEELAGSSHWFGPGSRIVITTRDRRVLDQHDVERIYEVKPLRTTQALQLF SKHAFKQPRPSEDYRELSLDVVEQLGGLPLAIQVVGGSLYRRELEFWEDKLDLLRNNGDNSVFKALKVSYEALDEIEKKI FLYVAVCFNGVYMDRVRKVLDLCFVSSRRRVLPTRPSIVALMEKCMISLSKKRLWVHDLLQDMAEDIVCEGKDERPWKRL MLWDFEDINHVFSTNMGDEAIDVESIFLDMSEGNELSITPGIFKKMPNLKLLKFYTNSSVEESRTRMLDGLEYLPTLRYL RWDAYHLKSLPSQFCTSFLVELNLSHSSIETVWSGSQQDLGNLRSLNLIRCKHLNEFPDLSKATNLESLKLSNCDNLVEI PGSSLRQLNKLVHFKLSNCKNLKNLPNNINLKSLRSLHLDGCSSLEEFPFISVTVEKLLLNKTSIQQVPPSIERLTRLKD IHLSDCKKLMNLPDCIKNLKFLNDLGLANCPNVTSFPQVGTNIRWLNLNKTSIQEVPSTIGDKSELRFLNMSGCEKLVSL PPTVKKLQQLKYLYLRGCVNVTESPNLAGGNTMKALDLHGTSITEELVDSNKGEEPPQCEVPVIRRFFMKNVRGRSKKRK SNR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |