Names & Information
Knowledge of BnaC06G0451000ZS:
| Gene Name | BnaC06G0451000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC06g39930D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2880 nt ATGGAGATTAGCTTTCTCCACCTGACTATATTCGTCTTCCTCGCATTTCTCTTGGTACCACTACGTCGCTTCCGCGACTT TCTGAAGAAACCGGAGACACCTCAGCTTCGTACTCACGTGCCTTCTTCAGTTTCTTCGGCGGCGGAGGATGAATCGAGGG GCCGGTCTCTGTGGAAGTACGACGTCTTCCTCAGTTTCAGAGGAATAGACTCTCGGAGATATTTCGTCAGCCATCTCTAC GAGGCTCTCACCAAGGAAGGAATCAAAGCCTTCCACGACGACAGAGAGCTTCCGAGAGGCGGTTTCATCTGGGAAGAACT CGTGAAAGCGATCGATGAGTCACGATTCGCCGTCGTTGTGCTCTCCGAGGGCTACGCTACCTCTCGCTGGTGTTTGGAAG AGCTTTCGCTTATCGTCGACCTCGCTTCCAAGAAACGGCTTGATCTGATCCCTGTTTTTCTTGACATCGATCCGTCAGAG TTGAAGAGGAGAAACGGCTGCTTCGAGAAAGCTCTTGCGAAACATGAGGTGAGGTATGATCTGGAGACGGTGGATAGGTG GAGAAGGGCGTTGGCTGAAGTTGGAAATATCTCGGGATGGGATTCCAAGACCAGGAGCGAGGAAGCAGTGCTTGTACAAG AAGTCGTTCGAGATCTTTCTAACAGATTGTTCTCACAGCCATCCAGCGACGCAGAGGGACTGGTTGGAATAATGCCCCAC ATGAGAAGCGTAGAATCTCTCTTATCCATGGACTCGGGAGATGTTCGAATGGTTGGAATCTGGGGCATGGGCGGCATAGG TAAATCCACCATTGCAAAGTTTGTTTGCAAACGCCTCTCAAGTAAGTTCGACGGCGTTTGCTTCCTAGAGAATGCGAAAG CGGAATTTGAACAGTATGGTTCATCGCATATGCGGCAGAAAGTCTTGAGGGAGATCCTCCGCAGAAAAGATCTGAACTCA TGGGACGGTGATTCTGGTGTCATGAGGCAACGGCTCCGTGGGAAAAGTATACTTCTTGTCATCGACAATGTTGACAACGT AGAACAGCTTCAAGAATTGGTCGGGAGCCTTGAGTGGTTTGGACCGGGGAGCAGGATCGTTATAACTACGCGGGACAAGC GTGTGCTGGAGCAGCATGATGTGGAATACATATATGAAGTCAAGCCTCTGAAGACTACCCAGGCACTTATGCTCTTCAGT AAGCATGCCTTCAAGCAACCTCGACCACCTAAAGATTCTGCAGAGCTCTCTATTGATATCGTCAAGCAACTCGATGGCCT TCCTTTAGCTATTCGAGTTGCTGGTGCAGCTCTGTATCGCCGGGACATTGCAGATTGGGAATATTATCTGGACCTACTGA GAACTAATGTCAATAGTTCTGTCTCGAAGGCGTTGAGGGAAAGTTTTGAGGCATTAAACAATCAAGAAAAGTTAATATTT CTTTACGTTGCCTGTTGTTTCAATGGAAAGCATATGCATGGCGTCAGCAGGGTGTTAGACCTTTTCACTGTTTCTGGGCA CATGCCATTCCGCTCCACGCTGTGTATCAAAACTCTTAAAGAGAAATGTCTAATTAGCATTTCAACCACAAAGAGGCTAT GGGTTCATGATTTACTCCAAGATATGGCTAGGAGTATCATTTGTGAAGGAAAAGAAGAAAACCCATGGAAACGTAAGATT CTGTGGAACTTTATGGACATCAACAACGTGTTTTGTGAAAATATGGGATCTGAAGCAGTTGAAGTTGAGAGTTTACTTCT TGACATGCCCAAAGGAAAGGAGCTCTGCATAAGCCCTGCAATCTTTGAGAGGATGTACAATCTAAAGCTGCTAAAATTTT ACAACAATTCCACTGGTGGAGAGAGTAGTAAGATATGCATGCCTGGCGGCCTTGTCTATCTCCCTATGCTGAGATATCTT CACTGGCAGGCGTATAGTCTGAAATCTTTGCCGTCTCGATTCTGCACTACATATCTAGTTGAACTCAACCTCCCTAACAG TTCGGTTGAAACACTTTGGAATGGAACTCAGGACCTTGGAAATTTAAGGCGAATGAATTTGAGAGGATGCAGACGACTAC TTGAAGTTCCCAACCTGTCAAAGGCGACAAGTCTAGAGAAATTAAATTTGGACAACTGTGAAAGCCTAGTTGATCTCACT GATTCTGTTAGACATCTAAATAACCTCGGGGTACTGGAGCTGAGCGGCTGCAAGAAACTCAAGAACCTCCCAAATAACAT CAACTTGAGGCTTCTTAGAACTCTACATCTTGAAGGATGCTCAAGTCTAGAAGATTTCCCATTCCTTTCAGAAAATGTTG AAAAGATATCACTTGACGAGACAGCAATCGAGGAAATTCCAGCGTCAATTGAGCGTCTATCAGAGCTCAAAACTCTGCAC TTATCAGGTTGCAAGAAACTGAAGAATCTTCCACGTACCATTAGAAACATAGATTCCCTCAAAACTCTCTGGCTCTCCAA CTGTCCCAACATCACACTATTTCCAGAGGTTGGAGATAACATAGAATCACTAGCGTTGAAGGGAACGGCAATAGAGGAAG TGCCTGCAACGATAGGTGACAAATCAAGACTCTGTTACCTCAACATGTCCGGGTGCCAAAGGCTTAAGAACCTGCCTCCC ACTTTGAAGAACTTGACACACCTGAAATTCCTCTTACTCCGGGGTTGCACCAATATCACAGAGCGTCCTGAGACCGCGTG TCGACTAAAAGCGTTAGATCTGAATGGGACATCCATAATGGAGGAAACTTCCGGGTCGGTTCAGTCCGACGACGAACCAC TTGATACGCCTAGATTGGCTCAATACATCCTTCAGTCTGTCAAGGAGCGCATCAGACACCAGAGGTCCATGAAGCTATGA |
| AA seq | Len:960 aa MEISFLHLTIFVFLAFLLVPLRRFRDFLKKPETPQLRTHVPSSVSSAAEDESRGRSLWKYDVFLSFRGIDSRRYFVSHLY EALTKEGIKAFHDDRELPRGGFIWEELVKAIDESRFAVVVLSEGYATSRWCLEELSLIVDLASKKRLDLIPVFLDIDPSE LKRRNGCFEKALAKHEVRYDLETVDRWRRALAEVGNISGWDSKTRSEEAVLVQEVVRDLSNRLFSQPSSDAEGLVGIMPH MRSVESLLSMDSGDVRMVGIWGMGGIGKSTIAKFVCKRLSSKFDGVCFLENAKAEFEQYGSSHMRQKVLREILRRKDLNS WDGDSGVMRQRLRGKSILLVIDNVDNVEQLQELVGSLEWFGPGSRIVITTRDKRVLEQHDVEYIYEVKPLKTTQALMLFS KHAFKQPRPPKDSAELSIDIVKQLDGLPLAIRVAGAALYRRDIADWEYYLDLLRTNVNSSVSKALRESFEALNNQEKLIF LYVACCFNGKHMHGVSRVLDLFTVSGHMPFRSTLCIKTLKEKCLISISTTKRLWVHDLLQDMARSIICEGKEENPWKRKI LWNFMDINNVFCENMGSEAVEVESLLLDMPKGKELCISPAIFERMYNLKLLKFYNNSTGGESSKICMPGGLVYLPMLRYL HWQAYSLKSLPSRFCTTYLVELNLPNSSVETLWNGTQDLGNLRRMNLRGCRRLLEVPNLSKATSLEKLNLDNCESLVDLT DSVRHLNNLGVLELSGCKKLKNLPNNINLRLLRTLHLEGCSSLEDFPFLSENVEKISLDETAIEEIPASIERLSELKTLH LSGCKKLKNLPRTIRNIDSLKTLWLSNCPNITLFPEVGDNIESLALKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPP TLKNLTHLKFLLLRGCTNITERPETACRLKALDLNGTSIMEETSGSVQSDDEPLDTPRLAQYILQSVKERIRHQRSMKL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |