Names & Information
Knowledge of BnaC07G0177600GG:
| Gene Name | BnaC07G0177600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g14550D [Brassica napus] |
| Best Hit (SwissProt) | TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1 |
| NT seq | Len:3456 nt ATGGAATTGGGTGAATCCAGTGGACAAACTCGGGAACGATGGAGCTACGACGTGTTCTTAAGTTTCCGTGGACCAGATGT GCGCCGTACCTTTTTAGACCATCTTTATACGAGTCTAGTGAGATCTGGAATATACGCATTCCGGGACGACAACGAACTAG CAAGAGGAAGAAGCATATCCCCGGAACTGTTGAAGGCAATTCAAACCTCGAAAATTCACCTTGTGGTTTTATCCAATAGC TATGCTTCATCATCTTGGTGCCTTGATGAGCTCGTGCACATTATCCGATGCTTTGAAAGCGACTCGGGACAAATTGTACT CCCAATTTTCTACAATGTTAACCCATCACATGTCCGCAGACAAACTGGATTATTTGGTGAATCTTTTTATCACCACTGTT TCCGTCATCCAGAGAGTAAGGCGCAGCAGTGGAAGGAAGCTTTAACTTACATTGGAAACTTGTCAGGGTATCACAGTCCT AACTGGGACACTGATGCAAAAATGATCGACCGTGTGATTAGAGACATTCTCCAAAGGCTGCCTAGTTCATACTTGCATTT ACCAACACACGCCGTTGGTATTAGATCACGTGTAAGCCGTATCGAGAAGCTAATGTGCTTTGGTTTGGATGATGTTCAGA TTATCGGAATCTGGGGAATGGCTGGGATCGGCAAAACAACCTTAGCCAAGGCTACATTTAACGAATTCTCACATCGTTTT GAAGGAAAAAGTTTCCTAGAAAACTTTGGAGATTACTTGAAGAAACCTAAAGGCAAGTTTCATCTTCAGAAAAAGCTTCT TTCGGATATCTTAAGGAGGGACGACGCAGTGTTCAACAACATGGATCATGCTGTGGAACAAAGATTTCGCAACAAAAGGG TATTCCTTGTCATTGATGATGTTGACGACATGGTTCAACTTCATTCAGTCGGAATAGATTTGAGATGCTTTGGTCCCGGA AGCAGGATAATCATTACAACCAAGAACAAGCATCTGTTAGAGCAGCTTGACGTAGAAAATATATATTCACCCAAGGAACT TAACCATGATGAATCTCTTGAACTTGTAAGCTGGCATACATTTAGAAGCAATGACCCTCCTACCAAGTTTCTCCAGCTGT CGAAAAACTTGGTTGATTACTGTGGAGGACTACCCTTGGCTGTGGAAGTCTTGGGTGCTTTTCTCTACAAGAGAAGCGTT TCGGAGTGGGAAAGCACGTTGGAATCGTTGAAAACAATACCTGATGATAACATTCAAGCAAAGCTTCAGATCAGCTTTGA TGCGCTAAACGCCGCACAGAAAGACATATTCTTGGATATATCCTGCTTCTTCATTAGGATGGATAAAGACTACGTATGTT GCATATTGAATGGATGCAGATTATATCCTGGCATAGGACTCAGTGTGTTAAAGGAGAGGTGTCTCATTACGATCCATGAT AACAGGCTGATGATGCATGACTTAGTACGAGACATGGGAAGATATATTGTCCAAGGAACATCTCTGAAGAACTGCGAGAG ATGGAGTAGATTGTGGGACCGTGATCATGTTATAGATGTATTGGCAAACTATTCTGGAACAGATGCAACTGAAGGACTTA GTTTGAAGGCTGAAGTCACAACGGCTGTTGATAACTTGGAGGCTAAGGCCTTTTCAAATCTACGTAAGCTGAGACTATTA CAGCTCAGTCATGTAGCACTCAACGGAAGCTATGAAAACTTTCCAAAAGGTTTACGATGGCTTTGTTGGGTTGGGTTTCC AGAGGAGTCTGTCCCGATAGACTTACATTTGAGAAGCTTAGTTGTCATGGACATGCAGAAAAGCAACCTTAAACGACTTT GGATTAATGATCAAAAGCCTCATGAGTACCTTAAGGAGCTAAAATACCTTGACCTCAGTCAGGCTATCCAGCTTACAGAG ACTCCGGACTTCTCTTATCTCCCAAACCTTGAGAAGCTGTTCTTGGTAAACTGTCAAAGATTGGTTAAAGTTCACAAGTC GATAGAGGTTCTTCAAGGAAGCCTGATTCTATTAAATCTGAGTGGTTGCATCAAGCTTGGTGAACTTCCGTTGGAGCTCT ATACGTTGAAGTCGCTGGAAACCCTTATTCTCTCGGGATGCTCGCAGCTTGAGAGATTGGATGATGCTTTAGGTGAACTG AAGTCCTTGACAACTCTTAAAGCTGATGATACTGCTTTGACGCAAATCCCATCCTCGAGTGGTCAACTGAAGAAACTGAA AGAGTTATCTCTTCATGGCTGCATGGAGTTATGGAAGGACAGACGCTACACCCATTCTGATGAAAGCTCTCAAGTGGCTC TGTTAAGTCCCCTCTCATTGAACGGTTTAAACTGCTTAAAGACTTTGCGTTTAGGTTCCTGCAATCTGCCGGATGAGCTG GTTCCTGCAAATCTTGGGAGTTTGTCATCGCTCGAAGAACTTGACCTCCAAGGCAACCACTTTCGTAACTTGCAAACGGA TTTTGCTGGTCTTTTAAGTCTACAGATTCTTAAGCTGGATAATTGCTCACGACTTCGATCCATGTTTAGTTTGCCAAAGA AGTTGAGGTCTTTCTACGCGAGAAACTGTACCGTGTTGGAAAGAATTCCAGACTTACAAGAGTGCTCGGTGTTGCAATCA TTGCATCTCACAAACTGTTACAATCTTGTTGAGACACCAGGGCTGGAGGGACTGAAAACAGTTGGAGTCATCCACATGGA AATGTGCAACGGCATACCATATTCTCACAGAGAAAGAATCATGCAGGGGTGGGCTGTTGCTGCCCATGGGGGGATTTTTG TCCCGGGATCAAGCCTTCCAGACTGGGTTAATTTCAAGAATGAGACACGTTCAATCTCTTTTACTGTCCCTGAACCAACT TTGAATTCTGATCTGGTCGGGTTTACCGTGGGGACAACATACGTGAGTCAGGAAGATGATGTGATGTATGCATACTCTCC AAAGATCACATTGAAGAATCAAACCAAGGGAGATGGATGGAGTCGTAATCTAGCAACGGATCACATTCGTATGTACCGTG AAGAACACATCTGGCAAGGGTTCTTTTCAAATGAAGATTTCTTGTTAGAAACAGGGGATCAAGTGCAAGTTTCTGTGGAT TTTGGAGATAAAGTCACCATTCTTAAGACAGGACTAACTCTTGCTTACAGAAAAGTCATTGAAGTCCCAAATGAACAACT GACTGAAACAGATGATGGAGTTGATAATGAACTAAATGAAAACCAAAGAAGACCTCCCAGGAAAGTGGGAATGTGTTTAA AGACACTTCTGGGGGCGTTTTGTTTGTTGGCATTCATTTTTGTTCTTGAAAAGCATGGTAGATCCCTGAGCCCCCACAAC CACAATCGCAGGGATTCTGATTTTGATTTGGTATTGGTGGTTCTGAATCTTAATAGAACGCGTGCTAGTGTTATTCCAAA ACGGTTTGTACGGTAG |
| AA seq | Len:1152 aa MELGESSGQTRERWSYDVFLSFRGPDVRRTFLDHLYTSLVRSGIYAFRDDNELARGRSISPELLKAIQTSKIHLVVLSNS YASSSWCLDELVHIIRCFESDSGQIVLPIFYNVNPSHVRRQTGLFGESFYHHCFRHPESKAQQWKEALTYIGNLSGYHSP NWDTDAKMIDRVIRDILQRLPSSYLHLPTHAVGIRSRVSRIEKLMCFGLDDVQIIGIWGMAGIGKTTLAKATFNEFSHRF EGKSFLENFGDYLKKPKGKFHLQKKLLSDILRRDDAVFNNMDHAVEQRFRNKRVFLVIDDVDDMVQLHSVGIDLRCFGPG SRIIITTKNKHLLEQLDVENIYSPKELNHDESLELVSWHTFRSNDPPTKFLQLSKNLVDYCGGLPLAVEVLGAFLYKRSV SEWESTLESLKTIPDDNIQAKLQISFDALNAAQKDIFLDISCFFIRMDKDYVCCILNGCRLYPGIGLSVLKERCLITIHD NRLMMHDLVRDMGRYIVQGTSLKNCERWSRLWDRDHVIDVLANYSGTDATEGLSLKAEVTTAVDNLEAKAFSNLRKLRLL QLSHVALNGSYENFPKGLRWLCWVGFPEESVPIDLHLRSLVVMDMQKSNLKRLWINDQKPHEYLKELKYLDLSQAIQLTE TPDFSYLPNLEKLFLVNCQRLVKVHKSIEVLQGSLILLNLSGCIKLGELPLELYTLKSLETLILSGCSQLERLDDALGEL KSLTTLKADDTALTQIPSSSGQLKKLKELSLHGCMELWKDRRYTHSDESSQVALLSPLSLNGLNCLKTLRLGSCNLPDEL VPANLGSLSSLEELDLQGNHFRNLQTDFAGLLSLQILKLDNCSRLRSMFSLPKKLRSFYARNCTVLERIPDLQECSVLQS LHLTNCYNLVETPGLEGLKTVGVIHMEMCNGIPYSHRERIMQGWAVAAHGGIFVPGSSLPDWVNFKNETRSISFTVPEPT LNSDLVGFTVGTTYVSQEDDVMYAYSPKITLKNQTKGDGWSRNLATDHIRMYREEHIWQGFFSNEDFLLETGDQVQVSVD FGDKVTILKTGLTLAYRKVIEVPNEQLTETDDGVDNELNENQRRPPRKVGMCLKTLLGAFCLLAFIFVLEKHGRSLSPHN HNRRDSDFDLVLVVLNLNRTRASVIPKRFVR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |