Names & Information
Knowledge of BnaC07G0216300ZY:
| Gene Name | BnaC07G0216300ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g20640D [Brassica napus] |
| Best Hit (SwissProt) | Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8 PE=2 SV=1 |
| NT seq | Len:3363 nt ATGGGGAAGCCAACCAAGCTCAAATCCCCGCCGCCGCCGCATCGCGTATTCATCAGCTCCCACGGTGGTGACTTGCTCCT CCGAGGCGGATTCGTCCATGAAATTGCCAAGGCCTTGAGAAGCATCAAAGTCAACGCGTACGCTGATGAGCCCACTGGTG AAGAAGTTGTTTGGACGAGGATCGAGAAGTCGAGGATCGCGATCGTGGTGTTCTCGAGCAGGTACACCGAATCGAGATGG TGCTTTGAGGAGCTTGTCAAGATCAAAGAAGGAATGGAACTAGGCGAACTCGAGGTGATTCCAATCTTCTACAAGCTGGA TACATCTGCAGAGCTAGAAGGTGGCTCCGGTTTGAATCCCACCATGCGTGATTTTGATCCTCAAAAGGTCAAGATTTGGA ACGAAGCTTTGGATTCTGTTTCGTGCATGATGGGTTATCACTTGTATAAGAACAGTGTTGAGTCCAAGTTTATCAGTCGC ATTGTCAAGGATGTGAAGAGAATATTGATCCAGCTTCCAAAAGAGGAGCAAGATGACGAGTCACATGATTCACTAGATGA CTCCTCCAAATCAGAGACGCTGAATGGTGGGAGTGTCCTAGGTGAAGCAGAATCAGTTGAGGATGACATTTTCCCAAACG AGAAAGTGGACTCAGTCAATGACCAAGAAGTTAGCACAAGCTCTGCCATAGTGACCTCCAACAAACCCCCGCTGGAGCAT CAAGTGTTCATCAATTTCCAGGGAAACGACCTCCGCTACGGCTTTGTCGGCCACATCGCGGAGGCCTTGGAAAGGGTTGG ATTCGAAGTCCGTATAGATGAAGATGAGTTGCAGCCTGGAGATCTTACTGAGCTTCTGTTCAAGCAGATCGAGGAGTCGA GGATTGCGATAGTAATTTTCTCAAGCAGGTACACTGAATCAACGTGGTGCTTAGATAAGCTGGTGAAGATCAAGGAACGC ATGGATGAAGGAAAACTCGAGGTGGTTCCAATCTTCTACAAGGTGAAGCAATTGCAGGTTACACAACTGGAGGGAAGTTT CGGTATCAGGATTTGGAATTTCTGGAGGAGGAGTCGAGAGTACCGTGTCATTAAATGGAAGGAAGCTTTGGAGTGTGTTG GAGGCTTGAAGGGTTTGGTATTTGAGGAGGATCGTCTTGAGAGCGAGCTCATTACATCCATCGTCAAGGACATTGAGAAG AAGATCGAGATTAAGGAAAGAAAAAATCCATCTTCTTTTCCTTTTACAGGGAGAGAAGATAACACTGAATTGCCCACAGG AAAAGGAGAAAACCTTGAAACGTTGTACGAAGAGTGGAACAGCAAATTTGTACATTGCATGCCTCTTCTTGGTATCTGTA AGAAGTCAAAGGACCATGAGCTAGTCTGGCTGCGGAAGACCTTACTGGAAGTTTTACTTGAAGGAGATCCTGACGCTACT GATGCCGTGAGTGAAGTAAGAGATCTCGCCGACAAGTTCATGATTACAGTCTCCGACGGGCGAGTAGAGATGAATGATCT ATTGTATAAGTTCGGCAAGGGTCTTGGTTCCCCTGTCATGGAACTGAACACAATCAAATATATTTATCCGCAAGGTAAAT ACGGTTCTCCTGTCCGCTTTGGTTGCACCGTTGGCAGTTGGAGCAAAGCACGTAACACATCACTGAGGTATGAGTTGTCT CATATATTTATTGGCTATACCACTATGCTAGATAGCAACAAACATGGTTTGGAGGATAGTGAAGAGGGTTGTAGTCTTAC TGAAGCTTCCCTTGAGTTTCAAGTGACAGATGGTACGGAAGTGGTAGGAAGTTTCAAGGTTCTGAACTGTGGCTTTAGAT TGATATATGCATCTAATGAAATGGAAAACACATGTTGGGATTCAATGACTGCTGTACTGCCAGAGAGGATCGAGCACTCC CAAGATGAAGCAAAATCTCATGAGAATTTCCGAAGCCCTGATGAAATCCAATATGAGTCTTCCTTTGATCCAACTCTGGG AGCCAATTCAAATTTTATAAGTGAAACAAAATCTGATGCCGAACCTGATTTGTGGAAGAGCTTGGAAAGCAAGATAGTTG ACATTTCAAATGTAGAAAATGACGCAGGAAAGGAAATCACCGTAAGCTCTGATCGTGACAACACATCGTCTGGAGATCAA ACACTGAATTGTAATTGTGAGTTTAATAATGAAGACGGGTCTTATAACCGCTTTAGTTGGACTATTGGCAGTTGGAGTGA TGCAGGTAAAACAGCTGGGAAGATTGTACCATCTCATGTCTTTATTAGCTATGCATCTATGTTGGATAACAAGAAACTTG GTGAGAAAGAAGACGAAGAGGGTTGTGGTCATACCAAGACTTATTTTAAATTTCAAGTAACAGACGGTACGGAAGTGTTA CATGGTTACGAGGTGCTGAAGTGTGGCTTTAGTTTGGTATATGCATCCGATGAATTGCGGGTCCAGTCTGGTAGACACGA AGCAAATCACTACGGAGCATATTCAAAAAATGCAATCTCTAATGTAAGGAGGGAAACGGAAACAATGGATATGCGGCTGG ATGGTGGGCATGACATAGTTGAATTGCCAAATGAAATGATAGCACATGGAACCGCTAACACTTCCCAACGACCTAATAAC AAGTCTCCTGTAACCACATTGAAGCAAACAAGAAGAGAGACACAAGTTCGAGCATTGTCTGTTCGGTTGACTGGGAAGCC TCGGGTTTACATCAGTTGCCATGGAGGTGATCTGTGCATCACTTTGGTCAAACATCTCGTGAATAATTTGACAAATGCTG GGGTCAACGTCTTCATAGACAACGACGAGAGAATGTGGATTAAAATGCACCAGCTCTACAATAGGATCGAGGATTCAAGG ATCGCAGTTGTTATCTTCTCCAAGAGGTACCTAGCTTCACGGTTGTGCTTGAACGAGCTTGCGAAGATGGACGAGCTAGC AAAGGAAGGAAGACTCCTAGTAATTTCCGTCTTCTACCAGGTGATATCTAGCGACATGAAAAATCTCAAGGGAGAGTGCG GACGATGTTTCAGGGAGATGAGAAAGAGACACGAGGACGAACCCGAGAATGTCCAGAAATGGGAGACTTCCTTGATGTCA ATGGCAGAGACAACCGGCGTACACTCGGAAATTCACGGCATAGATGCCGCTCTTGTTAAAGCGACTGTTAAGGCAGTTCA TAGAGAGCTAACAAAGATAGCTGGAGGAAAATTCAAGTCCCTCGGAAGAGGAGTTATGTTAAGTGCACGTGTGTTCATTT TTGCCTTGTTTGCGGCTCTTCTCTTTAGTCTCTTCGTATCTCCTCTGCTTTTCGCTGATGCGGCATTCGCCGCCTTCTGG TAA |
| AA seq | Len:1121 aa MGKPTKLKSPPPPHRVFISSHGGDLLLRGGFVHEIAKALRSIKVNAYADEPTGEEVVWTRIEKSRIAIVVFSSRYTESRW CFEELVKIKEGMELGELEVIPIFYKLDTSAELEGGSGLNPTMRDFDPQKVKIWNEALDSVSCMMGYHLYKNSVESKFISR IVKDVKRILIQLPKEEQDDESHDSLDDSSKSETLNGGSVLGEAESVEDDIFPNEKVDSVNDQEVSTSSAIVTSNKPPLEH QVFINFQGNDLRYGFVGHIAEALERVGFEVRIDEDELQPGDLTELLFKQIEESRIAIVIFSSRYTESTWCLDKLVKIKER MDEGKLEVVPIFYKVKQLQVTQLEGSFGIRIWNFWRRSREYRVIKWKEALECVGGLKGLVFEEDRLESELITSIVKDIEK KIEIKERKNPSSFPFTGREDNTELPTGKGENLETLYEEWNSKFVHCMPLLGICKKSKDHELVWLRKTLLEVLLEGDPDAT DAVSEVRDLADKFMITVSDGRVEMNDLLYKFGKGLGSPVMELNTIKYIYPQGKYGSPVRFGCTVGSWSKARNTSLRYELS HIFIGYTTMLDSNKHGLEDSEEGCSLTEASLEFQVTDGTEVVGSFKVLNCGFRLIYASNEMENTCWDSMTAVLPERIEHS QDEAKSHENFRSPDEIQYESSFDPTLGANSNFISETKSDAEPDLWKSLESKIVDISNVENDAGKEITVSSDRDNTSSGDQ TLNCNCEFNNEDGSYNRFSWTIGSWSDAGKTAGKIVPSHVFISYASMLDNKKLGEKEDEEGCGHTKTYFKFQVTDGTEVL HGYEVLKCGFSLVYASDELRVQSGRHEANHYGAYSKNAISNVRRETETMDMRLDGGHDIVELPNEMIAHGTANTSQRPNN KSPVTTLKQTRRETQVRALSVRLTGKPRVYISCHGGDLCITLVKHLVNNLTNAGVNVFIDNDERMWIKMHQLYNRIEDSR IAVVIFSKRYLASRLCLNELAKMDELAKEGRLLVISVFYQVISSDMKNLKGECGRCFREMRKRHEDEPENVQKWETSLMS MAETTGVHSEIHGIDAALVKATVKAVHRELTKIAGGKFKSLGRGVMLSARVFIFALFAALLFSLFVSPLLFADAAFAAFW * |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |