Names & Information
Knowledge of BnaC07G0225200GG:
| Gene Name | BnaC07G0225200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g18280D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3486 nt ATGGCTTCTTCCTCAACTCCCATGGTCAACGGACACCCTCAAGAGCGCCCTCAAGTGTTCATCAACTTCAGAGGAGAGGA ACTACGCAAAAACTTTGTCAGCCATTTGGAGGACGCCTTGAAGGATGAGGACATCAACTACTTTATTGACACGATGGCAG ATCCAGGGGACGAGATGGTTAACCTTTTCAACCACATCGAGGAGTCGAAAGTCGCACTTGCGGTTTTTTCTGAACGGTAC TCAGAATCAAACTGGTGTCTGGACGAGCTGGTGAAGATTATGGAGAGGGTCGATGAGAAGAAACTTAGAATCTTCCCCAT CTTCTTCCATGTGAAGGTAGGAGATGTGAAATACCAGAAGGGGAAATTTGGTGAAAACTTAAGAAAAGGAGAAGGCCGTG ACCTATGTAATATGGATAAATGGAAGAAAGCTTTGCAGTCAGTTTCTCGAATAGTAGGTTTGCGTTTGGAGGCTGACAGT GACAGGACCGAGAGCAATTTTATCAGCCAGGTCGTTGAGAAACTGAAGACCGTGATAGCCTTGATCGAAAGAGAGGAAGG AACCAACATGGTTTCTACTAGTATGTCCTCTATGAATTCTATTGGAAATGCTTCATCTGGAGACATCTTACAGCCGATAG CGCCTTTCCCCAGCAATGGAATGAAAGAAGTCCTGAAGCAATTGGAAGAAAAGATAGATTTCAAATCCGAAGAAACTCAA ATCGTTGGAATTGTTGGGATGCCTGGGACTGGTAAAACAGCCCTCGCGGAAATGCATCATCAAGAGTGGCAGTACAAGTT TTTGTTCAATGAGTTTTTCCGGGGATTCCGTGAAAAGTCCAAAGACGACTATGATTGGGTGAAGAACACGCTTCTAAATG CTCAACTCCAAAGGACAGGCAATGTAAAGATTTTTGTCGTTCTAGATGACGTGAGCGACAAGAAACAACTCGAGTTCCTT CGGACGAACCCCGGACTTATTAAGAAAGGAAGCAAGATTGTGATAACAACACGTGACAAGGGATTGATAGCAGATTTAGT TGAAGATACATACGTGGTCCCTGGATTGAACGACAAAGAAGCTCTACAGCTCTTCAGCCATCATGCCTTCAATGGTCAAG ACTGTGATCATCCCCCAGAGAATTTCATTGAAATGTCAAAAATGTTTGTGGAATATGCCGGAGGCAATCCACTAGCTCTC CAGGAATTGGGAAATGAGCTTTGCGGGGAAAATGAGGCTCACTGGAGAAGGAGACTAGAAACGCTGCCACATTGTTGCAA TGAGAACATCGGAAGAGAACTAAGAATCAGTTATGACGACCTGACTCAGATGCAGAAACATGCATTTCTCGACATAGCTT GTTTCTTTAGATCCGAGGAAGAAGATTATGTACAACATTTACTGGACACTAACTCTGGTGAAGCTGGAAGCGAAGTTATT AGAGATCTCGCCGACAAGTTCATGATAAATATCTCTGCGGGCCGAGTAGATATGCATAATCTCTTTTGTACGCTGGGAAA AGAAATTGGTTCATCAGTTGAAAAAAATTTGGGGAAAAGTAGATTGTGGAATCGTGAAGATGCTCGTGAGGCTCTGGTCC TCAAAAAGGGAACTGTTAGTGCACGAGGTGTATTCCTAGATATGTCCAAAATAGGCAAGGGAATAGCCTTAGAACGTAAA GCTTTGATTAAGATGCCGAATCTGCGGTACCTCAAAATCTTTGACTCTGGCTGTCCTCGGCAATGTGAGCCTGTTGACGG CAAAGTAAACTTGCCTGAGGGACTTGAGTTTCCCTTGAAAGAGATCCGATATCTTCACTGGCTGAAATTTCCACTGGAGG AACTTCCGCCAGACTTCAACCCAGAGAATCTTATCGACCTTAGGCTGCCTTACAGCAAGATTAAAAGGGTTTGGAGAGAG ACTAAGGATACACCAAATTTAAAGTGGGTAGATCTAACTCATTCGACTAACTTGAACGACATTTCAGCTTTGTCAAATGC TATATCTCTTAGACGGTTGAGTCTTGAAGGTTGCACTAAGCTTGATAAGTTGCCAGAAGGTATAGAAAATATGAAGAGTC TTGCTTTCTTGAATCTCAGAGGATGCACAAGGCTCTTGTCTCTCCCAGACATTAATAACTTAATCTCTCTCAAGACTCTC ATCCTCAGTGACTGTAAAATGTTCAACGAATTTCAGGTAATTTCTGATAATCTTGAATATCTACATTTAGATGGTACTGC GATTAAGGGACTCCCTCCGTCCATCCAAAACCTCGGAAAACTTATTGTTTTGAATCTGAAAGACTGCAATGAACTTGAGT CTCTACCAGACTGTCTTGACAAGCTTAAAGCTCTTGAAGAACTGATACTCTCTGGTTGTTCAAGGCTTACAAATTTTCCC CATGTTGAGGAAATTATGGAGAATCTTCAAATTTTATTACTCGATGGGACGTCGATCAAAGAGCTTCCAAGTACATTATT ACATTCTGGTAATAACTCCATCGACCAATTGGCTTTACAACGGATACAACTCCGGATGACTGGATTATCCTTATTGCGGC GTCTATGCTTAAGTAGAAATGATAAGATCAGCAGCTTGCAATCAAGCATCAGTCAACTCTATCATTTGAAATGGATTGAC TTGACGTATTGCAGTAATCTGACATCTCTTTCAACGCTCCCACCGAATCTACGATGCTTAGATGCACATGGTTGCACCTC ACTAAGAACAGTTGCCAGTCCTTTGGCCAGTCTCTTGCCGTCAACAGAGCAGGTCCCATCCTCATTTATTTTTACCAACT GTGAAAAATTGGAGCATGTTGCAATGAACGAGATCATGTGCTATGCTCACAATAAGAGTCGTCTGATTTCAGATGCACTG AACCGCCAAAATAAGAGACTTGCTTTGGAAGCTTTGGTTGGCACTTGCTTTCCCGGAATTGAAGTTCCGGCATGGTTCAA TCACAAAGCCTTTGGAGCAGTCATAAAGCCAGAGCTGCCTAGACATTGGAGTGAAAGTGGCTTTTCCAACTGTGATGTTG GAGGTTTATCCGAGGCAGGCAATGAGCAATGCACAGTCAAATCTACTCATGTTTTCATTGGCTTCACTAGTTGGTTGAAT ATCAACAAATGTAGAGAAGTTGGCCTTAAAGAAGGGTGTATTCCTGCTAAGGCTTCCATTGAATTTAAGGTCACGGATGG TACTTGTGAGGCTGCAAACTGTGAGGTACTAAAGTGCGGTTTTAGTTTCGTTTGTGAATCTGATAATGGTTCTTGGAATG CAAATGCTGAAGCAACTCCAATGATTTATGAATCTAATAACGGTGCTTTGGAGGCAAACGCTGAAGCAACTCCAGTGATA GTTGAATCTAATACTGGTTCTTCGGATGCAAACGTGGTTGCAAATCCAGTGGTAGAGGGAGAAATACAAGGTGGAGGTAG ATTTTTGGGTCTCTTGAGAAGAAGAGCATGGTTTTTAAATTTATGA |
| AA seq | Len:1162 aa MASSSTPMVNGHPQERPQVFINFRGEELRKNFVSHLEDALKDEDINYFIDTMADPGDEMVNLFNHIEESKVALAVFSERY SESNWCLDELVKIMERVDEKKLRIFPIFFHVKVGDVKYQKGKFGENLRKGEGRDLCNMDKWKKALQSVSRIVGLRLEADS DRTESNFISQVVEKLKTVIALIEREEGTNMVSTSMSSMNSIGNASSGDILQPIAPFPSNGMKEVLKQLEEKIDFKSEETQ IVGIVGMPGTGKTALAEMHHQEWQYKFLFNEFFRGFREKSKDDYDWVKNTLLNAQLQRTGNVKIFVVLDDVSDKKQLEFL RTNPGLIKKGSKIVITTRDKGLIADLVEDTYVVPGLNDKEALQLFSHHAFNGQDCDHPPENFIEMSKMFVEYAGGNPLAL QELGNELCGENEAHWRRRLETLPHCCNENIGRELRISYDDLTQMQKHAFLDIACFFRSEEEDYVQHLLDTNSGEAGSEVI RDLADKFMINISAGRVDMHNLFCTLGKEIGSSVEKNLGKSRLWNREDAREALVLKKGTVSARGVFLDMSKIGKGIALERK ALIKMPNLRYLKIFDSGCPRQCEPVDGKVNLPEGLEFPLKEIRYLHWLKFPLEELPPDFNPENLIDLRLPYSKIKRVWRE TKDTPNLKWVDLTHSTNLNDISALSNAISLRRLSLEGCTKLDKLPEGIENMKSLAFLNLRGCTRLLSLPDINNLISLKTL ILSDCKMFNEFQVISDNLEYLHLDGTAIKGLPPSIQNLGKLIVLNLKDCNELESLPDCLDKLKALEELILSGCSRLTNFP HVEEIMENLQILLLDGTSIKELPSTLLHSGNNSIDQLALQRIQLRMTGLSLLRRLCLSRNDKISSLQSSISQLYHLKWID LTYCSNLTSLSTLPPNLRCLDAHGCTSLRTVASPLASLLPSTEQVPSSFIFTNCEKLEHVAMNEIMCYAHNKSRLISDAL NRQNKRLALEALVGTCFPGIEVPAWFNHKAFGAVIKPELPRHWSESGFSNCDVGGLSEAGNEQCTVKSTHVFIGFTSWLN INKCREVGLKEGCIPAKASIEFKVTDGTCEAANCEVLKCGFSFVCESDNGSWNANAEATPMIYESNNGALEANAEATPVI VESNTGSSDANVVANPVVEGEIQGGGRFLGLLRRRAWFLNL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |