Names & Information
Knowledge of BnaC07G0226600GG:
| Gene Name | BnaC07G0226600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g20650D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:3393 nt ATGAAACATCTCCAGATCTTACTTATTGACATGATCGGAGGAAAAGAGATGCCAAACATCATTACATCCAAGGGCCAAGC TTCTCCAGATAAGTTCGTACACGGCCCAAGCGGATGGCCACAGGGTGTTAATGGAGTATCCTCTCTACGACGTCTATCGT TAAATGGAAATGATTTTGTCAGCCTGCAAACTGACATTTGGAAACTTTACAATCTTAATTGGCTCGACGTGAAGAATTGC AAGATGCTAAAGTCTATTCCGATGCTTCCACCAAGACTTCAGTACTTTGATGCTCAGGGCTGTGATTCACTCGAAACTGT TTCACATCCTTTGGCCATTCCTGTCCTGACGCAACAGAAACATGCCACTTTCAATTTTTCCAACTGTAACAAGCTGGATC AAGATGCAAAGGATAGTATTATATCATATATTAGTTGGAAATTTCAGTTAGTGTTAGATGCACTCTCTAGATACAGCGAG GATTCTGTTTTGGAAGCTTTAATTGGAACTTGCTTTCCTGGATGTGAAGTACCGGCATGGTTCAGCCATCGAGCATTTGG ATCGGTGTTAGAGTCAAAGCTGCCCCTACATTGGAGTGACAACAAGTTTACTGGAATTGCCCTATGCGCTGTTGTCCTAT TTCCTGAATTCCACGAGCAGAGGGACCGCCTCGTAGTGAAATGTAATTGTGTTTTTAATAGTAAATACGGTTCTCCTGTC CGCTTTGGTTGCACCGTTGGCAGTTGGAGCAAAGCACGTAACACATCACTGAGGTATGAGTTGTCTCATATATTTATTGG CTATACCACTATGCTAGATAGCAACAAACATGGTTTGGAGGATAGTGAAGAGGGTTGTAGTCTTACTGAAGCTTCCCTTG AGTTTCAAGTGACAGATGGTACGGAAGTGGTAGGAAGTTTCAAGGTTCTGAACTGTGGCTTTAGATTGATATATGCATCT AATGAAATGGAAAACACATGTTGGGATTCAATGACTGCTGTACTGCCAGAGAGGATCGAGCACTCCCAAGATGAAGCAAA ATCTCATGAGAATTTCCGAAGCCCTGATGAAATCCAATATGAGTCTTCCTTTGATCCAACTCTGGGAGCCAATTCAAATT TTATAAGTGAAACAAAATCTGATGCCGAACCTGATTTGTGGAAGAGCTTGGAAAGCAAGATAGTTGACATTTCAAATGTA GAAAATGACGCAGGAAAGGAAATCACCGTAAGCTCTGATCGTGACAACACATCGTCTGGAGATCAAACACGTTACGTTGG AGTTGAGCTGCGACTCAAGCAAATGGAAAAAATGTTGTACTCGATGCCTGGAGAAACTTTTATTGTTGGAGTTGTTGGGA TGCATGGCATTGGTAAAACAACTCTCGCAACAATGTTGTTTGAAAAGCGTGGGTCGAAGTTTCCAAGACGCTTGTTTTTG ACAGTGCCTAAGGAGTGCGAACCTGAGCAGTTGCGGAGCATGCTTAAGAATCTTTCAGATGTAAGGGAGAGCATGAAACA TCTCCAGAGCTTACTTATTGACAGGATCGGAGCAAAAGAGATGCCAAACATCACTATATCCAAGGGCCAAGCTTCTGCAG ATATGTTCGTACACGGCCCTAGCGGATGGCCACAGGGTGTTAATGGAGTATTCTCTCTGCGGCGTCTATCGTTAAGTGGA AATGATTTTGTCAGCCTGCAAACTGATATTTGGGAACTTTACAATCTAAATTGGCTTGAATTGAAGGATTGCAAGATGCT GAGGTCTATTCCAATGCTTCCACCAAGACTTCAGTACTTTGATGCTCATGGCTGTGATTCCCTCGAAAGAGTTTCACATC CTCTTGCTCTTCCGGTGCGGCTGGAGCAGATCCATGCCACATTTAATTTTTCTAACTGCAGCAAGTTGGATCAAGATGCA AAGGATAGTATCGTATCTTATACTCGGTGGAAAAGTGAGTTAGTGTTAGATGCACTCTCTCTATACAACAACGGGGATTC TGCTTTGGAAAATTTCACTGGAGCTTGCTTTCCTGGATGGGAAGTACCCGCACGATTTAGTCATCAAGCATCTGGACCGG TGTTAGAGGGAAAGCTGTCTACACACTGGAGAGACAACAACTTAACTGGAATAGCTCTATGCGCTGTTATCCTGTTTCCT GACTACCATGAGCAGAGGGCCCGCCTTGTAGTGAATTGTAATTGTGAGTTTAATAATGAAGACGGGTCTTATAACCGCTT TAGTTGGACTATTGGCAGTTGGAGTGATGCAGGTAAAACAGCTGGGAAGATTGTACCATCTCATGTCTTTATTAGCTATG CATCTATGTTGGATAACAAGAAACTTGGTGAGAAAGAAGACGAAGAGGGTTGTGGTCATACCAAGACTTATTTTAAATTT CAAGTAACAGACGGTACGGAAGTGTTACATGGTTACGAGGTGCTGAAGTGTGGCTTTAGTTTGGTATATGCATCCGATGA ATTGCGGGTCCAGTCTGGTAGACACGAAGCAAATCACTACGGAGCATATTCAAAAAATGTAGCAATCTCTAATGTAAGGA GGGAAACGGAAACAATGGATATGCGGCTGGATGGTGGGCATGACATAGTTGAATTGCCAAATGAAATGATAGCACATGGA ACCGCTAACACTTCCCAACGACCTAATAACAAGTCTCCTGTAACCACATTGAAGCAAACAAGAAGAGAGACACAAGTTCG AGCATTGTCTGTTCGGTTGACTGGGAAGCCTCGGGTTTACATCAGTTGCCATGGAGGTGATCTGTGCATCACTTTGGTCA AACATCTCGTGAATAATTTGACAAATGCTGGGGTCAACGTCTTCATAGACAACGACGAGAGAATGTGGATTAAAATGCAC CAGCTCTACAATAGGATCGAGGATTCAAGGATCGCAGTTGTTATCTTCTCCAAGAGGTACCTAGCTTCACGGTTGTGCTT GAACGAGCTTGCGAAGATGGACGAGCTAGCAAAGGAAGGAAGACTCCTAGTAATTTCCGTCTTCTACCAGGTGATATCTA GCGACATGAAAAATCTCAAGGGAGAGTGCGGACGATGTTTCAGGGAGATGAGAAAGAGACACGAGGACGAACCCGAGAAT GTCCAGAAATGGGAGACTTCCTTGATGTCAATGGCAGAGACAACCGGCGTACACTCGGAAATTCACGGCATAGATGCCGC TCTTGTTAAAGCGACTGTTAAGGCAGTTCATAGAGAGCTAACAAAGATAGCTGGAGGAAAATTCAAGTCCCTCGGAAGAG GAGTTATGTTAAGTGCACGTGTGTTCATTTTTGCCTTGTTTGCGGCTCTTCTCTTTAGTCTCTTCGTATCTCCTCTGCTT TTCGCTGATGCGGCATTCGCCGCCTTCTGGTAA |
| AA seq | Len:1131 aa MKHLQILLIDMIGGKEMPNIITSKGQASPDKFVHGPSGWPQGVNGVSSLRRLSLNGNDFVSLQTDIWKLYNLNWLDVKNC KMLKSIPMLPPRLQYFDAQGCDSLETVSHPLAIPVLTQQKHATFNFSNCNKLDQDAKDSIISYISWKFQLVLDALSRYSE DSVLEALIGTCFPGCEVPAWFSHRAFGSVLESKLPLHWSDNKFTGIALCAVVLFPEFHEQRDRLVVKCNCVFNSKYGSPV RFGCTVGSWSKARNTSLRYELSHIFIGYTTMLDSNKHGLEDSEEGCSLTEASLEFQVTDGTEVVGSFKVLNCGFRLIYAS NEMENTCWDSMTAVLPERIEHSQDEAKSHENFRSPDEIQYESSFDPTLGANSNFISETKSDAEPDLWKSLESKIVDISNV ENDAGKEITVSSDRDNTSSGDQTRYVGVELRLKQMEKMLYSMPGETFIVGVVGMHGIGKTTLATMLFEKRGSKFPRRLFL TVPKECEPEQLRSMLKNLSDVRESMKHLQSLLIDRIGAKEMPNITISKGQASADMFVHGPSGWPQGVNGVFSLRRLSLSG NDFVSLQTDIWELYNLNWLELKDCKMLRSIPMLPPRLQYFDAHGCDSLERVSHPLALPVRLEQIHATFNFSNCSKLDQDA KDSIVSYTRWKSELVLDALSLYNNGDSALENFTGACFPGWEVPARFSHQASGPVLEGKLSTHWRDNNLTGIALCAVILFP DYHEQRARLVVNCNCEFNNEDGSYNRFSWTIGSWSDAGKTAGKIVPSHVFISYASMLDNKKLGEKEDEEGCGHTKTYFKF QVTDGTEVLHGYEVLKCGFSLVYASDELRVQSGRHEANHYGAYSKNVAISNVRRETETMDMRLDGGHDIVELPNEMIAHG TANTSQRPNNKSPVTTLKQTRRETQVRALSVRLTGKPRVYISCHGGDLCITLVKHLVNNLTNAGVNVFIDNDERMWIKMH QLYNRIEDSRIAVVIFSKRYLASRLCLNELAKMDELAKEGRLLVISVFYQVISSDMKNLKGECGRCFREMRKRHEDEPEN VQKWETSLMSMAETTGVHSEIHGIDAALVKATVKAVHRELTKIAGGKFKSLGRGVMLSARVFIFALFAALLFSLFVSPLL FADAAFAAFW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like; K16226 disease resistance protein RPS4 (A) |