Names & Information
Knowledge of BnaC07G0231800NO:
| Gene Name | BnaC07G0231800NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Camelina sativa] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:3618 nt ATGGCTGCTTCTTCCTCTTCCTCGTCCAATGAACTTCCAGAGTCATGGCAAGTGTTCATCAACTTCCGTGGGATGGAACT ACGCAACAACTTCGTCAGCCATCTTGAGAGAGCTCTAACAGAGGCTGGAATCAACTATTACATTGACAATAAAGAGATGC GGAGCGAAGATCTCAAAGTCCTTTTCAAGAGAATCCAGCAGTCACAGATCGCGTTGGCCATCTTCTCGAGCATGTACACG GAATCAAACTGGTGTTTGGACGAGCTCGTTGAGATCATGGAACAAGTGAAGAAAGGTCAACTCAAAATCATCCCTATCTT CTTCAACGTGACCCCAGAGGAGGTTAAAGATGAGGGAGGACATTTCCGCTATATGATGTATAGAGAAAGTAGAAAGAAAG GATCTGATCTCCAGAAGTGGGAGAACGCGTTAGAGTCTGTTCCAAGCAAAATGGGCTTGACATTGAAGGAATGTAATGGG AGCGAGCGGTTGCTTGTTGAAAAGATTGTTAAGTCGGTCAAAAAAGTCCTAGCTCAACTAGTAAGCAGACCAAATGTTCT TCCTCAAGATACCTCACAGGTAAGTTCTGGTGGCGATACTTCCTTTCAAATGCCTAAAGAAAAGCCTGTCTTCGAAGATG AAATGAATCGACGCCTGAAGCAATTGGATGAAAAGATAGATATCGATTGCAAAGAAACTCAAGTTCTTGGAATTGTTGGG ATGCCTGGGATTGGTAAAACCAATCTTGCGGAATTGCATTTCCATATGAAGAAAACCAAGTTCTTGTTTAGGAAGATTAT CTCAAGCATCCGTGAGAAGTCAGAACACCAAGAGCCTGACTGTCTGAAGAAAGAGCTTCTGACTGGTCAAGACTATAATG ATGACGCTTCTATGTTCAATAAGAAACTCTTTTTTGTTCTTGATGACGTGAGCGACAAGAAACAAGTAGATTTTCTAGTC GAAAATCTCAGCTTGATAAAGAAGGGAAGCAAGATTGTCATTACAACTCGTGACAAATCATCAATTGCAGGACTGGCTCA GGAGACATATGTGGTCCCTGGTTTAAACGATAAAGATGCATTGGAGCTCTTTGAATATCATGCCTTTGCAGACCAAGTCT CTAGCACCAAAGGGAATTTCCCCAAGCTGTCCAAACAGTTTGTGGATTACGCTGGAGGCAATCCACTAGCCCTTGAAGAG TTGGGAAAGGAGCTTCATGGGGAAGACGAGGCTCATTGGGAAAAGAGACTAGTAACGCTGCCATACCGGTGCAACCCAAA GATACTAACCGAGTTGAGAACCAGCTATGACAAGCTGAGTTATCAACAGGAGGATGCGTTTCTCGACATAGCTTGTTTCT TCAGGTCAGAGGAGGAAGATTATGTCAAGTGTTTACTGGATCAGTATGACTCCGAGTCTGGAGAAGATGCTGTTAGAGAA CTAGCTGAAAAGTTGTTGATCAGTATCTCTGCGGGCCGAATAGAGATGCATAATATACTGTGTACATTTGGCAAGAAACT TGGTTCATCATCCCATGAAAATAAGTCAGGGGAAAGAATGTGGGCTTATAGAACAATAACTGAAACACTATGCTTGAAAG AGATGATCAGCCCTGACCAGACCAAAAAGGGAGAGAGAAAGGTGAGAGGCATTTTCCTAGACACGTCCAAAGAAGAAAAA GTGGGAACACACCCAATATGGAAATATGGAAAAGATGATACGAAAATACCATTAGACATGAAAGCTTTTACCGACAGGTT CAACCAGATGGATCTTCGATACCTCAAGATCTATGACTCTCTTTGTCCTCAGAACTGTAAAGTAATCTTGCCGGACGGAC TTGAGTTTCCATTTCAAGAGGTCCGTTATCTCCACTGGCAGAACTTTCCGTTGGAAGAACTTCCACAAGACTTCAACCCA CAGAATCTCATTGATCTCAGGCTGACTCATAGTACGATGATTGAACGTCTTTGGGAAGCTGTTACGGAAGTGCCTCGGTT GAAGTGGGTTGATCTGAGTTACTCGGTTAAGTTGACCGACTTATCAGCATTGTCAAATGCATATCATCTTCGAAGGTTAA ATCTTGAAGGCTGCAAGATTCTTGAGAAGTTGCCTGGAGATATGGAAAACATGAAGAGCCTTGTTTTTCTGAACCTCAGA GATTGTGTAATGCTGTCTTCTCTGCCAGAAAATCTGGCTTTAGTCTCTCTGAAAACCCTCATCCTCAGTGGCTGCTCAAG GTTTACAAAATTTGATCTTATATCTAAAAATCTTGAGTTTCTTCATTTAGAAGGCACTGCCATCTCGAGTCTTCCCTCGA CCATCCAAGACTTCAAGAAACTTGTGTTACTAAATCTTAAAAACTGTAAAAGGTTGGAGTCTCTTCCCAATTGTCTGGAA AAGCTGAAGGCTCTTGAAGAACTGATGCTGTCAGGCTGTTTCAAGCTCAAAGGTCTTCCTGAAATTAGAGAGAAGATGGA AAATCTTCAGATTTTACTACTTGATGGAACCTCAATACAGTGTCTTAGCGTCAACGACCACATAGTTAACCAACAGCCAC TCCAGATGAATAGCTTATCTATGTTGCGGCGTCTCTGCTTAAGCAGCAATGATATGATCTACAGCTTGCAATCTAGCATA AGTCAACTCTATCATCTGAAATGGATCGACTTGAGGTATTGCACCAACCTCACGTCTCTTTTAACGCTTCCACCGAATCT TCAATACTTAAACGCACATGCCTGCACATCGCTAAAGACAGTAGCGAGTCCTCTTGCTCGTCTCATGCCAACGGATCAGA TCTCTTCTTCATTCATCTTCACTAACTGTGATAAGCTAGAGCACGCGGCAAAGAACGAAATTATATGCTACGCTCACAGT AAAAGCCAGCTCTTGTCAGATGCACTGCATCGTCACAACAAGGGTGTTGCGTTTGAGAATTTGGTTGCCACTTGCTTTCC TGGAAGTGAAGTTCCTGTGTGGTTCAGTTACAGAGCTTCAGGAGCAGTGTTGGAGCGAGAGCTGCTTCCAAGCGACCATG GGTTTGTTGGCATAGCTTTATGTGCTGTTGTCTCGTTTGAGAACTACAAAGCCCAAAACAACAACTTCATGGTGAAGTGC TTATGTGAGTTCAACAACGTCGACACGTCTTCTAGCTTCTTCAGTTTCCATATAGGAGATTTATCCGAGGAGAAAGACGA CCAACGCACGATTAAGTCTACTCACGTGTTCATTGGCTTCACCAGCTGGTTGAATATCAACCATTGTCAAGAACTAGGCC TTAGGAGAAGGTGTGGTCCTTCTAAAGCTTGCATTTCGTTTCTAGTCACAGACGGTACTCGTGAGGTTGCAAAATGCAAG GTACTGAAGTGCGGTTTTAGTTTGGTTTGTGAATCTGGTAATGGGTCTTGGGATGCAAACGCTGAGGCAAGTGACGATGC AAGTTCAGAGGTTACTGAATCTGATTATTATTTTCAGGATGCAATCGATGGTCCAACAGATAGTGATGACGATTCTTCGA GTGAACGCGCTGGCGAAAGTAGATTATTGGGTCTCCTTAAAAGAGGATGGCTTAGTACTTTGTCCCCGTTTGTTTCTTCA TCCCCATTTAGCACCTAA |
| AA seq | Len:1206 aa MAASSSSSSNELPESWQVFINFRGMELRNNFVSHLERALTEAGINYYIDNKEMRSEDLKVLFKRIQQSQIALAIFSSMYT ESNWCLDELVEIMEQVKKGQLKIIPIFFNVTPEEVKDEGGHFRYMMYRESRKKGSDLQKWENALESVPSKMGLTLKECNG SERLLVEKIVKSVKKVLAQLVSRPNVLPQDTSQVSSGGDTSFQMPKEKPVFEDEMNRRLKQLDEKIDIDCKETQVLGIVG MPGIGKTNLAELHFHMKKTKFLFRKIISSIREKSEHQEPDCLKKELLTGQDYNDDASMFNKKLFFVLDDVSDKKQVDFLV ENLSLIKKGSKIVITTRDKSSIAGLAQETYVVPGLNDKDALELFEYHAFADQVSSTKGNFPKLSKQFVDYAGGNPLALEE LGKELHGEDEAHWEKRLVTLPYRCNPKILTELRTSYDKLSYQQEDAFLDIACFFRSEEEDYVKCLLDQYDSESGEDAVRE LAEKLLISISAGRIEMHNILCTFGKKLGSSSHENKSGERMWAYRTITETLCLKEMISPDQTKKGERKVRGIFLDTSKEEK VGTHPIWKYGKDDTKIPLDMKAFTDRFNQMDLRYLKIYDSLCPQNCKVILPDGLEFPFQEVRYLHWQNFPLEELPQDFNP QNLIDLRLTHSTMIERLWEAVTEVPRLKWVDLSYSVKLTDLSALSNAYHLRRLNLEGCKILEKLPGDMENMKSLVFLNLR DCVMLSSLPENLALVSLKTLILSGCSRFTKFDLISKNLEFLHLEGTAISSLPSTIQDFKKLVLLNLKNCKRLESLPNCLE KLKALEELMLSGCFKLKGLPEIREKMENLQILLLDGTSIQCLSVNDHIVNQQPLQMNSLSMLRRLCLSSNDMIYSLQSSI SQLYHLKWIDLRYCTNLTSLLTLPPNLQYLNAHACTSLKTVASPLARLMPTDQISSSFIFTNCDKLEHAAKNEIICYAHS KSQLLSDALHRHNKGVAFENLVATCFPGSEVPVWFSYRASGAVLERELLPSDHGFVGIALCAVVSFENYKAQNNNFMVKC LCEFNNVDTSSSFFSFHIGDLSEEKDDQRTIKSTHVFIGFTSWLNINHCQELGLRRRCGPSKACISFLVTDGTREVAKCK VLKCGFSLVCESGNGSWDANAEASDDASSEVTESDYYFQDAIDGPTDSDDDSSSERAGESRLLGLLKRGWLSTLSPFVSS SPFST* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |