Names & Information
Knowledge of BnaC07G0237600ZS:
| Gene Name | BnaC07G0237600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g18310D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:6918 nt ATGGCAACCGACGCAAAAAGAGCGTCACAGCATCATAACGTGTTCATCAATTTTCGAGGCGCCGAGCTGCGCCATAACTT TGTTGCTCACCTGGAGAGTGCCTTAAAAATGGACGGATTCAACGCCTTCGTAGACCAATATGATTTGAGGGGTGGCGATC TTATACACTTACCTTTCAAGAGGATTGAAGAGTCGAGGATCGCGCTGACTATCTTCTCAACAAAGTACGCTGAATCATCA TGGTGCTTGGATGAGCTGGTGAAAATTAGGGAACGTGTGGAGGAAGGCACACTCGTTTTGATTCCCATATTCTATAAGCT GAATCCATACGATGTCAAAAGGCTTGAGGGAGATTTTGGCTCTAAGTTGTGGAATCACGTGAAGCATACTTCTGAATTTG ACAAGCTCAAGAAATGGAAAGAAGCTCTGGATTTCATTTCTCAAAAGACTGCCTTGGTTTTGACTGAGAACAGTGATGAG AATGAGTTCATCATAAGAATCACCAAGGAAGTCAAGAGAGTGATCCGGAATTTAGAGGAGCAACTGGATCCTGGTTTCTA CGGATCAGAGAAGTTGAAGCAGGTGGATAGTGAAAGTGATGCAAATCCAGAAGAAGTTGATGAGAGTGTGGGAGGTGAAG CAAGCATGTATAGCAAATCAAGAAGTGAGGATGACATGTTCCTTGGTGAAGAAAACTCTGATGCAATCCCTAATTTAGAG AATAGCTTTGACAGCAAGCATGGAAAAGCCAAGCAAAATTCTATAATCGCGACCTACGAAACATACGCAGCACCGCATCA TGTGTTCATCAATTTCCAAAGGAAAGATGTCGGTTTCAGCTTTGTAAGCCATTTGGTTTGTGCCTTGGTAAGGAAAGAGG TCAGCGTTTTAGTTGACAAAGACGAGAAGAGAGGTGAAGAGGATGTTGACAATCTTTTCAAGAAAATAGAGGATGCGAAA ATTGCACTAGTAGTGTTTTCAACCAGCTACTCAGAATCAACATGTTGCTTAAACGAGCTGGTGAAGATCAAAGAATGCAT GGACGAAGGCAAACTCAAAGTCATTCCGATCTTCTACAAGGTGGAGCGATCGCATGTGCAACAACTGAATGGAGATTTTG GTTGTAAGCTTTGGAATTTTTGGAGGCTTCATCGAGACCACAATATTATTAAATGGGTGGAAGCATTGGAGTCTGTTGCG AGCCTTGGGGATATGTTGGAACTCTCATCCACGGAGGACAGATTAGAGAGCATGTTTGTGACTTCCATTGTCGAGCATGT CAGTGAAGCTCTTAGTAAGATTCCTTTACAGGAAGGATACAGTCTTGAAACTACAAAATTTCATGAAGGAAGAGAAGTAA AATCTATATATCTCAACAAGCTCCCGCTCTATGGCATCGAACAACGTGTGGAGCAACTGGAGCAGATTTTAGAGTTTGAT TGCGACGAAACTAGGATTGTTGGAGTTGCTGGGATGCCTGGCATTGGAAAAACCACTCTCGCAATGTGGTTGTATGAAAA CTGGAACTGCAAGTTCGTACGGTGTGTGCCTCTTCTGGGTATCCGTAAGAAGTCGGAAGAACATGGGCTAGTGTGGCTAA GGACAACACTCTTAAAAGTATTACTCGGTGGGGAGATTCCAAACATAAATGACAAGACAACGAATGAATCCATAAAGAAG GAATTGCTTCAGACCAAAGTCTTTATTATTCTAGATGACGTGACTGACAAGAAACAGATTGAGTTTCTACTTGGTGACTT CAAATGGATTAAGAAGGGAAGCAAAATTGTTATCACAGCGCGCGACAAATCTTTGCTGGAGGGATTGGCTGATGATACAT ATTTGTTATCATCCCTTGATGGTCAAGACTCTAGTCCTCAGGGGACATTATTGACTCGGTTCACAAAATCCGTGGAGAGT GCTGGAGGAAACCCACTAGCTCTGAAGCTAATGGGTAGAGAACTTCGTGGGAAAGACAAGTATCATGACTCAGAACATAA ACTGAAAATACGAACACAAAGTTTGAATACGAAGATCCTAGATGTCTGGAAATTTTATATTGATCAACTTAATAAGCAGC AAAAAGATGCGTTCCTTGACATTGTGTGGTTTTTCAAATCAGAGGATGAGTATTTTGTTAGGAGTATACTAGATTCAGGA GATCCTGACTCTATTGATGCTGTAAGTGAAGTAACGGATCTCGCTAACAAGTTCCTAATTACAATCTCCGACAGCCGGGT ACAGATGAATGATCTGTTGCAGACACTCGGGAAGCACATTTGTTCTGCGGGCAGACATAAGCTGTCGGAATCAAAATATA TCATCAACAAGCTGGAAAAGCTCGAAGAAACTGACAGAGGTATTTTCTTAGACCTGTCAAAAGTGTCGAATAACATCGTC TTGAAGCCGCGCACCTTCACCAGTTTGTCCAATCTCCGATACCTCAAGATATATGATTCTAATGATCCTCGAAAATGTAA ACAAGACTTCAATTTAAACTTCCCTCATGGGCTCAAGCTCCCTTTAAAAAAGCTTCGATATCTCCATTGGGTAAAATTTC CATTGGATGAACTTCCCTCAGACTTCTGGCCGGATAATCTTGTTGACCTTCGGCTTCCTCACAGCAATATTACACGTCTT TGGGAAGGTGTCAAGGACACGCCAAGGTTGAAGTGGGTGGATCTAAGTCACTCGCGTAAGTTGGTCAGTTTATCAGGATT ATCAAAGGCTAAATATATCCAAAGACTGAATCTGGAAGGCTGCACAGTTTTGGATAAATTGCCATCAGAGATTCAAAATA TGAAATCTCTTGTTTTCCTTAATATGAGAGGATGCATACGTCTTTGGTCTCTTCCAAAAATGAACTTGGTATCCCTTAAG ATTCTTATCCTCAGCGACTGCTCAAATCTCAAGGAATTTCAGGTTATTTCCAAAAGTATAGAATTTCTACATTTAGATGG CACTGCAATCATCAAACTTCCTCCTACTATCGAGAATCTTCAAAAACTTGTTTTGCTAAACATGAAAAACTGCAAATCGC TGGAGTGTATTCCCAACAGTCTCAGCAAGCTAAAAGATCTTGAAGAGCTAATACTTTCAGGTTGTTCAAGGCTACAGAAA CTTCCAGATGTCAAGCATAGCATGAAACATATCAAGATCTTACGTCTTGATGGAGTAGGAGCAAAAGAGATGCCAAACAT ATCGACCTTCATTAGATTTGAAGGCCAAGCTTCTGGGTCGTATTGCAATCCGAGGGAATGGCCACATGGTGTTAATGACA TTTCTTCACTAGGACGTCTATGTTTAAGCGGAAATTATTTCGTTTGCCTGCAAGCTGACATATGTAAGCTCTATAATCTG AGATGGCTAGATGTGAAGCAGTGCAAGAAGCTGAGATCTATTCCAATGCTTCCACCAAGAATTCAGTATTTTGATGCTCA TGGGTGTGCGTCCTTGGAAAGAGTGTCAAATCCTCTGGCGCTTCAAGTGTTAACAGGGCATATTCATGCCACCTTTAATT TCTCCAACTGCAACAAGCTTGATCTAGACGCAAAGGATAGTATCATCTCTTATACTCGTTGGAGAAGCGAGCTAGCACTA GATGCACTCTCTAGATATGATGGGGGTTTTGCTTTGGAAGGTCTGATTGTTACTTGCTTTCCTGGACGGGAAGTACCAGT ATGGTTCAGTTACCGAGCATCTGCATCAGTGTTAAAGCAAAAGCTACCTGCACACTGGTGCGACAATAAGTTCACAGGGA TAGCTCTATGTGCTGTTATCTCTGCTGGAAACCATGACCATACGAGCCATCTCTTGGTAAAATGTGGTTGTGAGTTCAAG AATGAAGACGGATCACGTATCAGCTTCAGTTTTAGTGTTGGAGGATGGAACGAAGCAGGAAGCACACTAATAATGATTGA GTCCTCTCATGTCTTCATTGGCTATATCAGTAGAAGGGATATCAATAAACATGGTGCTGGAATTGGAGAGGGATGTAACT GGACTGAAGCTTCCCTTGAGTTTCAAGTGACAGATGGTACTAAAGAGTTAGCAGGTTGCAAGGTGTTGAATTGCGGGTTT AGTTTGGTATATGCATCTGATGAAAAGAATTATGTACTTCCGGAGAGGGTTGAGAAGCCTAAACTGCTTTCTTCTGTTGG AGTTGATCTACGGCTCAAGCAACTGGAGAAAGCGTTGTACTCTACGCCTGGAGAAACTCGTATAATTGGAGTTGTGGGGG AGCCAGGTATTGGCAAAACAACTCTTGCAAAGGCTTTGTTTAAAAAGCGTGGGTGTGGGTTCCCACAAAACTTGTTCTTA AAGATGTCAAGAGCTCACAGACCAGAGCGTTTGAGAAGGACGTTTCTGGTAAATCTACTAAAGCCTGTGAATCAAACCAT AAGCGGTGAGACAACACATGAAAATGTGAAGGATAGCCTGCTTAAAGCTAAATCTTTTATCGTTCTCGATGACGTGAGTG ACAAGAAGCAGTTAGAGTTTCTCCTTGGCAACCTCAAGTGGATCAAGAAGGGAAGCAAGATTGTAATTACTTCACGTAAC ATGTCGTTCCTTGAGGGATTTGCTCATGATACTTACATGGTTCCAAAATTGGACAACAGAGAGGCCTTTCAACTTTTTTG TTATTATGCATTTGATAATCAGATATGTAGTCCCACAAGGACCTTCATGATACTGGCCAGAATAATTGTGGATAAAAATG GAGGCAACCCACAAGCTCTGAAGTTATTGGGTAGTGAACTTCGTGGTAAAGACAAGACTCACTGGGAAAATAAGATGCAA ACATTGACACGCATTGCGAAGATCCAAGAATTCAAGAGATCATATATGGATCAACTCAATCAACAACACAAAGATGTGTT CCTAGACATTATATGGTTTTTCAGATCAGAGGAGGAGTGTCTAGTTAGAAGTCTATTGGATTCAGGAGATTTGTATTCTA TTAGTGAAGTCAGGAATCTCACTGATAGGTTCATGACTGATATCTCTAACGGCCGTGTAGATATGGATGGGGAAGTTTCT ATGTTCGCTAAGGACCATGGTTCTCATGGGCGGTATACGCTGTTGAACTATGATGATATCAATGAAAAGCTCAAGAATAT GGGAAATGTGGAAGCTAATAATGTGAGAGGTATATTTTTAGACCAGTCTGAAGTAACAAAAAGCATTGCATTGGAACGCA TGACCTTCACCAATATGAGCAATCTTCGATGCCTCAAGGTGTATGATTCTTGTTGTCCACGGCAGTGTAAATCTGACAGT AAATTATACTTTCCGGATGGGCTTGGTCTCCCATTGGAAGAGATCAGATATCTTCACTGGTTAAAATTTCCACTGATGGA ACTTCCATCAGAGTTTAAAACAGAAAATCTTGTTGACCTTAGGCTTCCTTACAGCAAAATTTCACATGTTTGGGAAGGAA TCAAGGAGACACCACGGCTGAGGTGGGTAGATCTAAGCCATTCAAGTAAGTTGCTCAGCTTATCGGCATTATCAAAGGCT GAAAATCTTGAGAGATTAAATTTAGAAGGCTGCACGAGCTTGTATGAGTTACCACTGGAGATTCAGAACCTGAAGTGCCT CGTTTACCTAAATATGAGAGGGTGCATACGTCTGCAGTGTCTTCCAAAGATAACTTTAATCTCTCTTAAAATTCTCATTC TCAGTGGATGTCCAAGTCTAGACGAATTTGAGTTAATTTCTGAAAGTTTAGAATTCTTGCATTTAGATGGAACTTCAATC AAGACACTTCCACCGGCCATAAGAAACCTCGGAAGACTTGTCATGTTGAACATGAGAAACTGCAAAATGTTGGAGTTCCT GCCAGACTGTATTTGCGAGTTGAAACTTTTGGAGGAGCTAATTCTCTCTGGTTGTTCAATGCTTAGGAACTTTCCCTATA TCAAGCAGAGTCTGACACATCTACAGATATTACTTTTTGATGGGACAGGAGCAGAAGAGATGCCACAAGTATTATACTTC ACTAGTGTCAGTAGAGCATCCTTACTTCATCATTTATCTTTGAGCGGAAATAATTTCGTCAGCTTGCAAGCTGACATCTC ACAACTCCATCACCTGAAATGGCTTGATGTGAAACACTGCAAGAAGCTAAGATCGGTTCCAGTGCTTCCTCCAAGACTTG AATACTTTGATGCACATGGTTGTGATTCTTTGGAAAAAGTTGCAAATCCGCTTACTCTTCCACTAGTGGCGACGGAGCAG ATACATGCCACGTTCATATTTTCCAACTGCAGAAAGCTTCATCAAGAGGCAAGGGATAGTATCATCTCCTATACTCGGCA GAAAATTCAATTAGTGCTAGATGCACTTTCTCGATACCATGGGGGAATTACCTCGGAAGCTTTGATTGGAACTTGTTTTC CTGGTTGGGAAGTACCCGCATGGTTTAGTCACCGAGCATCTGGATCATTGTTGAACTCAAAGCTGCCTCCATACTGTGAC AACAGGTTTACTGGGATAGTTCTATGCGCTGTAATCCAGTTTCCATGTTACAATAACCACTCTAATCTCTCGGTGGAATG TACCGGTGTATTCAAGACTGAAGACGGAACTCATATTCCCTTTAGTTGCAGTATTGGAGTTTGGAGCGAATCAAGTAACA TGACGCAGAAAATGGACTCATCTCATGTCTTTATTGGCTATGTTCGTAGACTGGATGTCGACACACAAGAGGAAATATGC GCATTTAATGAAACCTCACTTGAGTTTCAAGTTACAGATGGTACCGAAGAGGTAGTAGTAGGTTGTGAAGTAGTTAAGTG TGGCTTTGATTTGGTACATGTACCCGATGAAAGAGAAAACATATTTGGGATGCATAAACTGTTGTCGACGTCCAGGGTGA AGCATCAAAACTACTTGAAAAGTGTCGGAGTTATATAG |
| AA seq | Len:2306 aa MATDAKRASQHHNVFINFRGAELRHNFVAHLESALKMDGFNAFVDQYDLRGGDLIHLPFKRIEESRIALTIFSTKYAESS WCLDELVKIRERVEEGTLVLIPIFYKLNPYDVKRLEGDFGSKLWNHVKHTSEFDKLKKWKEALDFISQKTALVLTENSDE NEFIIRITKEVKRVIRNLEEQLDPGFYGSEKLKQVDSESDANPEEVDESVGGEASMYSKSRSEDDMFLGEENSDAIPNLE NSFDSKHGKAKQNSIIATYETYAAPHHVFINFQRKDVGFSFVSHLVCALVRKEVSVLVDKDEKRGEEDVDNLFKKIEDAK IALVVFSTSYSESTCCLNELVKIKECMDEGKLKVIPIFYKVERSHVQQLNGDFGCKLWNFWRLHRDHNIIKWVEALESVA SLGDMLELSSTEDRLESMFVTSIVEHVSEALSKIPLQEGYSLETTKFHEGREVKSIYLNKLPLYGIEQRVEQLEQILEFD CDETRIVGVAGMPGIGKTTLAMWLYENWNCKFVRCVPLLGIRKKSEEHGLVWLRTTLLKVLLGGEIPNINDKTTNESIKK ELLQTKVFIILDDVTDKKQIEFLLGDFKWIKKGSKIVITARDKSLLEGLADDTYLLSSLDGQDSSPQGTLLTRFTKSVES AGGNPLALKLMGRELRGKDKYHDSEHKLKIRTQSLNTKILDVWKFYIDQLNKQQKDAFLDIVWFFKSEDEYFVRSILDSG DPDSIDAVSEVTDLANKFLITISDSRVQMNDLLQTLGKHICSAGRHKLSESKYIINKLEKLEETDRGIFLDLSKVSNNIV LKPRTFTSLSNLRYLKIYDSNDPRKCKQDFNLNFPHGLKLPLKKLRYLHWVKFPLDELPSDFWPDNLVDLRLPHSNITRL WEGVKDTPRLKWVDLSHSRKLVSLSGLSKAKYIQRLNLEGCTVLDKLPSEIQNMKSLVFLNMRGCIRLWSLPKMNLVSLK ILILSDCSNLKEFQVISKSIEFLHLDGTAIIKLPPTIENLQKLVLLNMKNCKSLECIPNSLSKLKDLEELILSGCSRLQK LPDVKHSMKHIKILRLDGVGAKEMPNISTFIRFEGQASGSYCNPREWPHGVNDISSLGRLCLSGNYFVCLQADICKLYNL RWLDVKQCKKLRSIPMLPPRIQYFDAHGCASLERVSNPLALQVLTGHIHATFNFSNCNKLDLDAKDSIISYTRWRSELAL DALSRYDGGFALEGLIVTCFPGREVPVWFSYRASASVLKQKLPAHWCDNKFTGIALCAVISAGNHDHTSHLLVKCGCEFK NEDGSRISFSFSVGGWNEAGSTLIMIESSHVFIGYISRRDINKHGAGIGEGCNWTEASLEFQVTDGTKELAGCKVLNCGF SLVYASDEKNYVLPERVEKPKLLSSVGVDLRLKQLEKALYSTPGETRIIGVVGEPGIGKTTLAKALFKKRGCGFPQNLFL KMSRAHRPERLRRTFLVNLLKPVNQTISGETTHENVKDSLLKAKSFIVLDDVSDKKQLEFLLGNLKWIKKGSKIVITSRN MSFLEGFAHDTYMVPKLDNREAFQLFCYYAFDNQICSPTRTFMILARIIVDKNGGNPQALKLLGSELRGKDKTHWENKMQ TLTRIAKIQEFKRSYMDQLNQQHKDVFLDIIWFFRSEEECLVRSLLDSGDLYSISEVRNLTDRFMTDISNGRVDMDGEVS MFAKDHGSHGRYTLLNYDDINEKLKNMGNVEANNVRGIFLDQSEVTKSIALERMTFTNMSNLRCLKVYDSCCPRQCKSDS KLYFPDGLGLPLEEIRYLHWLKFPLMELPSEFKTENLVDLRLPYSKISHVWEGIKETPRLRWVDLSHSSKLLSLSALSKA ENLERLNLEGCTSLYELPLEIQNLKCLVYLNMRGCIRLQCLPKITLISLKILILSGCPSLDEFELISESLEFLHLDGTSI KTLPPAIRNLGRLVMLNMRNCKMLEFLPDCICELKLLEELILSGCSMLRNFPYIKQSLTHLQILLFDGTGAEEMPQVLYF TSVSRASLLHHLSLSGNNFVSLQADISQLHHLKWLDVKHCKKLRSVPVLPPRLEYFDAHGCDSLEKVANPLTLPLVATEQ IHATFIFSNCRKLHQEARDSIISYTRQKIQLVLDALSRYHGGITSEALIGTCFPGWEVPAWFSHRASGSLLNSKLPPYCD NRFTGIVLCAVIQFPCYNNHSNLSVECTGVFKTEDGTHIPFSCSIGVWSESSNMTQKMDSSHVFIGYVRRLDVDTQEEIC AFNETSLEFQVTDGTEEVVVGCEVVKCGFDLVHVPDERENIFGMHKLLSTSRVKHQNYLKSVGVI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |