Names & Information
Knowledge of BnaC07G0238800ZS:
| Gene Name | BnaC07G0238800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g20650D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:5241 nt ATGGGGAAGCCAACCAAGCTCAAATCCCCGCCGCCGCCGCATCGCGTATTCATCAGCTCCCACGGTGGTGACTTGCTCCT CCGAGGCGGATTCGTCCATGAAATTGCCAAGGCCTTGAGAAGCATCAAAGTCAACGCGTACGCTGATGAGCCCACTGGTG AAGAAGTTGTTTGGACGAGGATCGAGAAGTCGAGGATCGCGATCGTGGTGTTCTCGAGCAGGTACACCGAATCGAGATGG TGCTTTGAGGAGCTTGTCAAGATCAAAGAAGGAATGGAACTAGGCGAACTCGAGGTGATTCCAATCTTCTACAAGCTGGA TACATCTGCAGAGCTAGAAGGTGGCTCCGGTTTGAATCCCACCATGCGTGATTTTGATCCTCAAAAGGTCAAGATTTGGA ACGAAGCTTTGGATTCTGTTTCGTGCATGATGGGTTATCACTTGTATAAGAACAGTGTTGAGTCCAAGTTTATCAGTCGC ATTGTCAAGGATGTGAAGAGAATATTGATCCAGCTTCCAAAAGAGGAGCAAGATGACGAGTCACATGATTCACTAGATGA CTCCTCCAAATCAGAGACGCTGAATGGTGGGAGTGTCCTAGGTGAAGCAGAATCAGTTGAGGATGACATTTTCCCAAACG AGAAAGTGGACTCAGTCAATGACCAAGAAGTTAGCACAAGCTCTGCCATAGTGACCTCCAACAAACCCCCGCTGGAGCAT CAAGTGTTCATCAATTTCCAGGGAAACGACCTCCGCTACGGCTTTGTCGGCCACATCGCGGAGGCCTTGGAAAGGGTTGG ATTCGAAGTCCGTATAGATGAAGATGAGTTGCAGCCTGGAGATCTTACTGAGCTTCTGTTCAAGCAGATCGAGGAGTCGA GGATTGCGATAGTAATTTTCTCAAGCAGGTACACTGAATCAACGTGGTGCTTAGATAAGCTGGTGAAGATCAAGGAACGC ATGGATGAAGGAAAACTCGAGGTGGTTCCAATCTTCTACAAGGTGAAGCAATTGCAGGTTACACAACTGGAGGGAAGTTT CGGTATCAGGATTTGGAATTTCTGGAGGAGGAGTCGAGAGTACCGTGTCATTAAATGGAAGGAAGCTTTGGAGTGTGTTG GAGGCTTGAAGGGTTTGGTATTTGAGGAGGATCGTCTTGAGAGCGAGCTCATTACATCCATCGTCAAGGACATTGAGAAG AAGATCGAGATTAAGGAAAGAAAAAATCCATCTTCTTTTCCTTTTACAGGGAGAGAAGATAACACTGAATTGCCCACAGG AAAAGGAGAAAACCTTGAAACGTATCTCAATAACCATCGCCTCTTTGGAATCAAGCTACGTATGGAGCAGTTGGAGCAGA AGTTAGAGTTTGATTGCGACGAAACTCGAATTATTGGAGTAGTTGGGATGCCCGGTATTGGTAAAACTACTCTTGCAATG AGGTTGTACGAAGAGTGGAACAGCAAATTTGTACATTGCATGCCTCTTCTTGGTATCTGTAAGAAGTCAAAGGACCATGA GCTAGTCTGGCTGCGGAAGACCTTACTGGAAGTTTTACTTGAAGATCCTGACGCTACTGATGCCGTGAGTGAAGTAAGAG ATCTCGCCGACAAGTTCATGATTACAGTCTCCGACGGGCGAGTAGAGATGAATGATCTATTGTATAAGTTCGGCAAGGGT CTTGGTTCCCCTGTCATGGAACTGAACACAATCAAATATATTTATCCGCAAGGGATATCCTTAATACTGTGGAACTTCGT TCAAAATAATTTCTTATATGATTTGCTGACATGTTATAATACAATTCCATATAGGATTTCTAAGAATCTTTCAGATATAA GGGAGAGCATGAAACATCTCCAGATCTTACTTATTGACATGATCGGAGGAAAAGAGATGCCAAACATCATTACATCCAAG GGCCAAGCTTCTCCAGATAAGTTCGTACACGGCCCAAGCGGATGGCCACAGGGTGTTAATGGAGTATCCTCTCTACGACG TCTATCGTTAAATGGAAATGATTTTGTCAGCCTGCAAACTGACATTTGGAAACTTTACAATCTTAATTGGCTCGACGTGA AGAATTGCAAGATGCTAAAGTCTATTCCGATGCTTCCACCAAGACTTCAGTACTTTGATGCTCAGGGCTGTGATTCACTC GAAACTGTTTCACATCCTTTGGCCATTCCTGTCCTGACGCAACAGAAACATGCCACTTTCAATTTTTCCAACTGTAACAA GCTGGATCAAGATGCAAAGGATAGTATTATATCATATATTAGTTGGAAATTTCAGTTAGTGTTAGATGCACTCTCTAGAT ACAGCGAGGATTCTGTTTTGGAAGCTTTAATTGGAACTTGCTTTCCTGGATGTGAAGTACCGGCATGGTTCAGCCATCGA GCATTTGGATCGGTGTTAGAGTCAAAGCTGCCCCTACATTGGAGTGACAACAAGTTTACTGGAATTGCCCTATGCGCTGT TGTCCTATTTCCTGAATTCCACGAGCAGAGGGACCGCCTCGTAGTGAAATGTAATTGTGTTTTTAATAGTAAATACGGTT CTCCTGTCCGCTTTGGTTGCACCGTTGGCAGTTGGAGCAAAGCACGTAACACATCACTGAGGTATGAGTTGTCTCATATA TTTATTGGCTATACCACTATGCTAGATAGCAACAAACATGGTTTGGAGGATAGTGAAGAGGGTTGTAGTCTTACTGAAGC TTCCCTTGAGTTTCAAGTGACAGATGGTACGGAAGTGGTAGGAAGTTTCAAGGTTCTGAACTGTGGCTTTAGATTGATAT ATGCATCTAATGAAATGGAAAACACATGTTGGGATTCAATGACTGCTGTACTGCCAGAGAGGATCGAGCACTCCCAAGAT GAAGCAAAATCTCATGAGAATTTCCGAAGCCCTGATGAAATCCAATATGAGTCTTCCTTTGATCCAACTCTGGGAGCCAA TTCAAATTTTATAAGTGAAACAAAATCTGATGCCGAACCTGATTTGTGGAAGAGCTTGGAAAGCAAGATAGTTGACATTT CAAATGTAGAAAATGACGCAGGAAAGGAAATCACCGTAAGCTCTGATCGTGACAACACATCGTCTGGAGATCAAACACGT TACGTTGGAGTTGAGCTGCGACTCAAGCAAATGGAAAAAATGTTGTACTCGATGCCTGGAGAAACTTTTATTGTTGGAGT TGTTGGGATGCATGGCATTGGTAAAACAACTCTCGCAACAATGTTGTTTGAAAAGCGTGGGTCGAAGTTTCCAAGACGCT TGTTTTTGACAGTGCCTAAGGAGTGCGAACCTGAGCAGTTGCGGAGCATGCTTAAGAATCTTTCAGATGTAAGGGAGAGC ATGAAACATCTCCAGAGCTTACTTATTGACAGGATCGGAGCAAAAGAGATGCCAAACATCACTATATCCAAGGGCCAAGC TTCTGCAGATATGTTCGTACACGGCCCTAGCGGATGGCCACAGGGTGTTAATGGAGTATTCTCTCTGCGGCGTCTATCGT TAAGTGGAAATGATTTTGTCAGCCTGCAAACTGATATTTGGGAACTTTACAATCTAAATTGGCTTGAATTGAAGGATTGC AAGATGCTGAGGTCTATTCCAATGCTTCCACCAAGACTTCAGTACTTTGATGCTCATGGCTGTGATTCCCTCGAAAGAGT TTCACATCCTCTTGCTCTTCCGGTGCGGCTGGAGCAGATCCATGCCACATTTAATTTTTCTAACTGCAGCAAGTTGGATC AAGATGCAAAGGATAGTATCGTATCTTATACTCGGTGGAAAAGTGAGTTAGTGTTAGATGCACTCTCTCTATACAACAAC GGGGATTCTGCTTTGGAAAATTTCACTGGAGCTTGCTTTCCTGGATGGGAAGTACCCGCACGATTTAGTCATCAAGCATC TGGACCGGTGTTAGAGGGAAAGCTGTCTACACACTGGAGAGACAACAACTTAACTGGAATAGCTCTATGCGCTGTTATCC TGTTTCCTGACTACCATGAGCAGAGGGCCCGCCTTGTAGTGAATTGTAATTGTGAGTTTAATAATGAAGACGGGTCTTAT AACCGCTTTAGTTGGACTATTGGCAGTTGGAGTGATGCAGGTAAAACAGCTGGGAAGATTGTACCATCTCATGTCTTTAT TAGCTATGCATCTATGTTGGATAACAAGAAACTTGGTGAGAAAGAAGACGAAGAGGGTTGTGGTCATACCAAGACTTATT TTAAATTTCAAGTAACAGACGGTACGGAAGTGTTACATGGTTACGAGGTGCTGAAGTGTGGCTTTAGTTTGGTATATGCA TCCGATGAATTGCGGGTCCAGTCTGGTAGACACGAAGCAAATCACTACGGAGCATATTCAAAAAATGTAGCAATCTCTAA TGTAAGGAGGGAAACGGAAACAATGGATATGCGGCTGGATGGTGGGCATGACATAGTTGAATTGCCAAATGAAATGATAG CACATGGAACCGCTAACACTTCCCAACGACCTAATAACAAGTCTCCTGTAACCACATTGAAGCAAACAAGAAGAGAGACA CAAGTTCGAGCATTGTCTGTTCGGTTGACTGGGAAGCCTCGGGTTTACATCAGTTGCCATGGAGGTGATCTGTGCATCAC TTTGGTCAAACATCTCGTGAATAATTTGACAAATGCTGGGGTCAACGTCTTCATAGACAACGACGAGAGAATGTGGATTA AAATGCACCAGCTCTACAATAGGATCGAGGATTCAAGGATCGCAGTTGTTATCTTCTCCAAGAGGTACCTAGCTTCACGG TTGTGCTTGAACGAGCTTGCGAAGATGGACGAGCTAGCAAAGGAAGGAAGACTCCTAGTAATTTCCGTCTTCTACCAGGT GATATCTAGCGACATGAAAAATCTCAAGGGAGAGTGCGGACGATGTTTCAGGGAGATGAGAAAGAGACACGAGGACGAAC CCGAGAATGTCCAGAAATGGGAGACTTCCTTGATGTCAATGGCAGAGACAACCGGCGTACACTCGGAAATTCACGGCATA GATGCCGCTCTTGTTAAAGCGACTGTTAAGGCAGTTCATAGAGAGCTAACAAAGATAGCTGGAGGAAAATTCAAGTCCCT CGGAAGAGGAGTTATGTTAAGTGCACGTGTGTTCATTTTTGCCTTGTTTGCGGCTCTTCTCTTTAGTCTCTTCGTATCTC CTCTGCTTTTCGCTGATGCGGCATTCGCCGCCTTCTGGTAA |
| AA seq | Len:1747 aa MGKPTKLKSPPPPHRVFISSHGGDLLLRGGFVHEIAKALRSIKVNAYADEPTGEEVVWTRIEKSRIAIVVFSSRYTESRW CFEELVKIKEGMELGELEVIPIFYKLDTSAELEGGSGLNPTMRDFDPQKVKIWNEALDSVSCMMGYHLYKNSVESKFISR IVKDVKRILIQLPKEEQDDESHDSLDDSSKSETLNGGSVLGEAESVEDDIFPNEKVDSVNDQEVSTSSAIVTSNKPPLEH QVFINFQGNDLRYGFVGHIAEALERVGFEVRIDEDELQPGDLTELLFKQIEESRIAIVIFSSRYTESTWCLDKLVKIKER MDEGKLEVVPIFYKVKQLQVTQLEGSFGIRIWNFWRRSREYRVIKWKEALECVGGLKGLVFEEDRLESELITSIVKDIEK KIEIKERKNPSSFPFTGREDNTELPTGKGENLETYLNNHRLFGIKLRMEQLEQKLEFDCDETRIIGVVGMPGIGKTTLAM RLYEEWNSKFVHCMPLLGICKKSKDHELVWLRKTLLEVLLEDPDATDAVSEVRDLADKFMITVSDGRVEMNDLLYKFGKG LGSPVMELNTIKYIYPQGISLILWNFVQNNFLYDLLTCYNTIPYRISKNLSDIRESMKHLQILLIDMIGGKEMPNIITSK GQASPDKFVHGPSGWPQGVNGVSSLRRLSLNGNDFVSLQTDIWKLYNLNWLDVKNCKMLKSIPMLPPRLQYFDAQGCDSL ETVSHPLAIPVLTQQKHATFNFSNCNKLDQDAKDSIISYISWKFQLVLDALSRYSEDSVLEALIGTCFPGCEVPAWFSHR AFGSVLESKLPLHWSDNKFTGIALCAVVLFPEFHEQRDRLVVKCNCVFNSKYGSPVRFGCTVGSWSKARNTSLRYELSHI FIGYTTMLDSNKHGLEDSEEGCSLTEASLEFQVTDGTEVVGSFKVLNCGFRLIYASNEMENTCWDSMTAVLPERIEHSQD EAKSHENFRSPDEIQYESSFDPTLGANSNFISETKSDAEPDLWKSLESKIVDISNVENDAGKEITVSSDRDNTSSGDQTR YVGVELRLKQMEKMLYSMPGETFIVGVVGMHGIGKTTLATMLFEKRGSKFPRRLFLTVPKECEPEQLRSMLKNLSDVRES MKHLQSLLIDRIGAKEMPNITISKGQASADMFVHGPSGWPQGVNGVFSLRRLSLSGNDFVSLQTDIWELYNLNWLELKDC KMLRSIPMLPPRLQYFDAHGCDSLERVSHPLALPVRLEQIHATFNFSNCSKLDQDAKDSIVSYTRWKSELVLDALSLYNN GDSALENFTGACFPGWEVPARFSHQASGPVLEGKLSTHWRDNNLTGIALCAVILFPDYHEQRARLVVNCNCEFNNEDGSY NRFSWTIGSWSDAGKTAGKIVPSHVFISYASMLDNKKLGEKEDEEGCGHTKTYFKFQVTDGTEVLHGYEVLKCGFSLVYA SDELRVQSGRHEANHYGAYSKNVAISNVRRETETMDMRLDGGHDIVELPNEMIAHGTANTSQRPNNKSPVTTLKQTRRET QVRALSVRLTGKPRVYISCHGGDLCITLVKHLVNNLTNAGVNVFIDNDERMWIKMHQLYNRIEDSRIAVVIFSKRYLASR LCLNELAKMDELAKEGRLLVISVFYQVISSDMKNLKGECGRCFREMRKRHEDEPENVQKWETSLMSMAETTGVHSEIHGI DAALVKATVKAVHRELTKIAGGKFKSLGRGVMLSARVFIFALFAALLFSLFVSPLLFADAAFAAFW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like; K16226 disease resistance protein RPS4 (A) |