Names & Information
Knowledge of BnaC07G0402200ZY:
| Gene Name | BnaC07G0402200ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: TMV resistance protein N-like [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:3066 nt ATGATGGAGCTAGAAAAGTTAATTGCCTTTGAAGAGACAGGCTGTGTGCGAATCGTCGGAGTTCTTGGGATGGCTGGGAT TGGCAAGACAACTGTTGCAGACTGTGTGTATAAGCAGAACTACAATCGCTTTGATGGTTACTGCTTTCTTGCAAACGTTC AGAACGAGTCAAAGCTACATGGATTAGACCATTTGCAGCGGAAACTCCTCCGTAAGTTATTAGATGAAGAAAATCTTGAT GTTGGAGCTCCTGAAGGTGCCCACGAAGCCTTTAAGGATCGTCTTCGGAACAAGAAACTGTTTATTGTGCTCGACGATGT GGCCAACGAAAATCAACTGAGAAATCTTATTGGTGGAGCAGGACAAGAGCTGTACCGAGAAGGAACACGGATTGTTATAA CAACAAGTAACAAGAAACTCCTAGAGAAGGTTGTGAATGAAACATACGTGGTTCCGAGGTTGAGCGGAAGAGAGAGTCTG GAGCTTTTCTGCTTGAGTGCCTTTTCTAGCAATCTCTGCGCCACTCCGGAGCTCATGGATCTATCAAACAAGTTTGTGGA TTATTCTAAAGGGCATCCACTAGCTCTGAAGCTGTTGGGTTCTGATCTATGCCAAAGAGATAAGTCTTACTGGAAGTTGA AATGGGAGAGGTTGCAGAGAAGACCAGATGGGAAGATCCATGACGTGCTGAAAGTGAGCTATGAGGAGCTATGTGAGGAA GAACAGAGCATTTTTCTTGATGTTGCTTGCTTCTTTAGAACAGAAAAGTTGGATTTTGTTTCGAGGGTTCTGAGCACTTA CCATACCGATGCTTCTACTCTGATTAGTGACCTTATTGACAAGTGCTTGATAACAGTCTCGGATAACCGGCTTGAGATGC ATGACTTACTGCTTACTATGGGGAGGGAAGTTGGTTATGAATCATCCATCAAAGAAGCAGGTAACCGCAGTCGGTTATGG AACCAAGAAGACATTTGTCGCGTTTTAAAGTACAAAACGGGTACTGCAGAGACCAGAGGCATCTTCTTAGATATGTCTAA TGTAGATAGCATGAAGCTAAGTGCTGATATTTTCTCGAGGATGTGGAATCTTAAGTTCCTCAAGTTCTACAATTCTCATT GTTCCAAGTGGTGTGAGAATGATTGTAGATTACGTTTTCCCAAGGGGCTTGATTGCTTTCCAGATGAGCTGGTTTATCTC CACTGGCAAGGGTACCCTCTGGAGTATCTACCATCCAACTTCAACCCGAAGAAACTCGTTTATCTTAATCTGCGTTATAG CAACACTATGCAACTGTGTGAAGATGAGAAGAACACAGGAGAGTTAAGGTGGGTCGATCTCAGTTATTCAAAAGAGTTGA TGAATCTAACTGGCTTGTTGGAAGCTCGTAAACTCGAGAGACTGAATCTTGAAAACTGTACAAGTTTAACCAAGTGTTCA GCGATCCGGCAGATGGACAGTCTTGTTTCACTGAATCTCAGAGATTGCATAAACCTCAAGAGTCTTCCAAAGAGAATCAA TTTGAAGTCTCTGAAGGTTGTTATCCTCAGTGGATGTTCAAAACTCAAGAAATTTCCAACTATCTCAGAAAACATAGAAT CTCTGTATTTGGATGGCACAGCGGTAAAAAGAGTTCCTGAATCCATAGAAAGTCTCCAGAAACTTACTGTGTTGAATCTG AAGAAGTGTTCCAGGTTGATGCATCTTCCTACCACTCTTTGCAAGCTGAAGTCTCTTAAAGAGCTGCTTCTCTCTGGATG TTCAAAGCTAGAGAGTTTCCCGGACATCAACGAAGACATGGAAAGCTTAGAGATTCTGCTCATGGATGATACAGCCATCA AACAAACTCCCAGAAAAATGGATATGAGCAATCTCAAGCTGTTCTCATTTGGTGGATCTAAAGTCCATGATCTCGCGTGT TTGGAGCTGCTGCCTTTCTCTGGCTGCTCGCGGTTGTCAGACATGTATCTCACAGACTGTAATCTGTACAAGTTGCCAGA CAGCTTTAGCTGCTTATCCTTGCTGCAGACTTTATGCTTGAGCAGAAACAATATCAAGAATCTACCTGGAAGCATCAAGA AACTTCATCATCTCAAATCTCTTTACTTGAAGCATTGTCAAAACCTCGTTTCTCTTCCAGTGCTTCCATCAAATCTGCAG TATCTGGATGCTCATGGCTGTATCTCGCTCGAAACAGTAGCTAAACCCATGACGCTTCTTGTGGTAGCTGAAAGGAACCA GTCTACTTTCGTCTTCACTGATTGTTTCAAGCTAAACAGAGATGCGCAAGAAAGTATTGTGGCTCATACTCAACTCAAGA GTCAAATACTGGGGAATGGATCCATTCAACTTAATCATAAGGGACTAGTTTCAGAACCTCTAGCTAGTGTAAGTTTTCCA GGAAACGATTTGCCATTATGGTTCCGCCATCAGAGAATGGGATCTTCAATGGAAACTCACCTGCCTCCACACTGGTGCGA CGATAAGTTCATCGGACTTTCTCTCTGCGTAGTTGTCTCATTCAAGGACTATGTAGATAAAACCAACCGATTCTCAGTGA TATGCAAGTGCAAGTTCAGAAACGAGGACGGTGACTGCATCAGCTTTACTTGTAATCTTGGAGGATGGAAAGAGCAATGT GGATCATCATCTAGCCGCGAAGAAGAACCAAGAAAACTTACCTCTGATCACGTCTTCATCAGCTACAACAACTGCTTCCA TGCCAAGAAAAGCCATGATCTCAACCGATGTTGCAACACCACAGCCTCGTTCAAATTCTTTGTTACTGATGGTGTAGCTA AAAGAAAGCTAGATTGCTGTGAGGTTGTGAAATGTGGGATGAGCTTGTTATATGCACCTGATGAGAATGATTGTAGATTG CAGGGATTACAGGAGAGTAGCCTCGAGAAAGCTGTATCTGGAAAAGAAACTGAAACCGCTGTGGATGAAGCTGTTGTGTC TAAGAGAGGCCGTTTCTGTATACCAGAAGAGCTACTAAATGGGAAAAGAATAAAGAAAGAAATCTCTTTTGCTGATTGTG ACTGTTCTGTTCTTAGTTACATATAG |
| AA seq | Len:1022 aa MMELEKLIAFEETGCVRIVGVLGMAGIGKTTVADCVYKQNYNRFDGYCFLANVQNESKLHGLDHLQRKLLRKLLDEENLD VGAPEGAHEAFKDRLRNKKLFIVLDDVANENQLRNLIGGAGQELYREGTRIVITTSNKKLLEKVVNETYVVPRLSGRESL ELFCLSAFSSNLCATPELMDLSNKFVDYSKGHPLALKLLGSDLCQRDKSYWKLKWERLQRRPDGKIHDVLKVSYEELCEE EQSIFLDVACFFRTEKLDFVSRVLSTYHTDASTLISDLIDKCLITVSDNRLEMHDLLLTMGREVGYESSIKEAGNRSRLW NQEDICRVLKYKTGTAETRGIFLDMSNVDSMKLSADIFSRMWNLKFLKFYNSHCSKWCENDCRLRFPKGLDCFPDELVYL HWQGYPLEYLPSNFNPKKLVYLNLRYSNTMQLCEDEKNTGELRWVDLSYSKELMNLTGLLEARKLERLNLENCTSLTKCS AIRQMDSLVSLNLRDCINLKSLPKRINLKSLKVVILSGCSKLKKFPTISENIESLYLDGTAVKRVPESIESLQKLTVLNL KKCSRLMHLPTTLCKLKSLKELLLSGCSKLESFPDINEDMESLEILLMDDTAIKQTPRKMDMSNLKLFSFGGSKVHDLAC LELLPFSGCSRLSDMYLTDCNLYKLPDSFSCLSLLQTLCLSRNNIKNLPGSIKKLHHLKSLYLKHCQNLVSLPVLPSNLQ YLDAHGCISLETVAKPMTLLVVAERNQSTFVFTDCFKLNRDAQESIVAHTQLKSQILGNGSIQLNHKGLVSEPLASVSFP GNDLPLWFRHQRMGSSMETHLPPHWCDDKFIGLSLCVVVSFKDYVDKTNRFSVICKCKFRNEDGDCISFTCNLGGWKEQC GSSSSREEEPRKLTSDHVFISYNNCFHAKKSHDLNRCCNTTASFKFFVTDGVAKRKLDCCEVVKCGMSLLYAPDENDCRL QGLQESSLEKAVSGKETETAVDEAVVSKRGRFCIPEELLNGKRIKKEISFADCDCSVLSYI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich repeats (2 copies) |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |