Names & Information
Knowledge of BnaC07G0415000GG:
| Gene Name | BnaC07G0415000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: TMV resistance protein N-like [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3654 nt ATGGCTGCTACATCTTCCTGCAAATCCGATCCTTCCCGCCGTCAGTACGACGTGTTTCTCAGCTTCCGAGGCACAGACAC GCGCCACTCCTTCACCTGCTATCTCCTCGATTTTCTTCGCCGGAAAGGGATCGACGCTTTCATCGACGAGGAACTCCGGC GAGGCAACGATCTCTCGGCGCTTCTCGAACGAATCGAGCAATCGAAGATCTCCATCGTCGTTTTCTCCGAGAATTACGCG GATTCCGCGTGGTGCTTAGAGGAACTCGCGAAGATCATGGAGTGCAAGAGGACTTTCGATCAGGTGGTTTTGCCGGTCTT CTACAAAGTTCCGGCGTCGGACGTGAGGTACCAGACTGGGAAATTCGGAGCTCCGTTCGAACGATCTGAAGAGGTCTTCC AGGGATCTGAACACAGAGTTCCGGCGTGGAAAGAAGCTCTAAGAGCTTCATCTGATATCGCCGGCTATGTGCTTCCGGAG AGAAGCCCGGAGTGCGACTTTGTCGACAAAATTGCCAAGGAAACGTTCAAGGTGCTAAACAAGTTGTCTCCATCAGAATT TCGTGGTCTTCCAGGCATTGAATCTCGTATGATGGAGCTAGAAAAGTTAATTGCCTTTGAAGAGACAGGCTGTGTGCGAA TCGTCGGAGTTCTTGGGATGGCTGGGATTGGCAAGACAACTGTTGCAGACTGTGTGTATAAGCAGAACTACAATCGCTTT GATGGTTACTGCTTTCTTGCAAACGTTCAGAACGAGTCAAAGCTACATGGATTAGACCATTTGCAGCGGAAACTCCTCCG TAAGTTATTAGATGAAGAAAATCTTGATGTTGGAGCTCCTGAAGGTGCCCACGAAGCCTTTAAGGATCGTCTTCGGAACA AGAAACTGTTTATTGTGCTCGACGATGTGGCCAACGAAAATCAACTGAGAAATCTTATTGGTGGAGCAGGACAAGAGCTG TACCGAGAAGGAACACGGATTGTTATAACAACAAGTAACAAGAAACTCCTAGAGAAGGTTGTGAATGAAACATACGTGGT TCCGAGGTTGAGCGGAAGAGAGAGTCTGGAGCTTTTCTGCTTGAGTGCCTTTTCTAGCAATCTCTGCGCCACTCCGGAGC TCATGGATCTATCAAACAAGTTTGTGGATTATTCTAAAGGGCATCCACTAGCTCTGAAGCTGTTGGGTTCTGATCTATGC CAAAGAGATAAGTCTTACTGGAAGTTGAAATGGGAGAGGTTGCAGAGAAGACCAGATGGGAAGATCCATGACGTGCTGAA AGTGAGCTATGAGGAGCTATGTGAGGAAGAACAGAGCATTTTTCTTGATGTTGCTTGCTTCTTTAGAACAGAAAAGTTGG ATTTTGTTTCGAGGGTTCTGAGCACTTACCATACCGATGCTTCTACTCTGATTAGTGACCTTATTGACAAGTGCTTGATA ACAGTCTCGGATAACCGGCTTGAGATGCATGACTTACTGCTTACTATGGGGAGGGAAGTTGGTTATGAATCATCCATCAA AGAAGCAGGTAACCGCAGTCGGTTATGGAACCAAGAAGACATTTGTCGCGTTTTAAAGTACAAAACGGGTACTGCAGAGA CCAGAGGCATCTTCTTAGATATGTCTAATGTAGATAGCATGAAGCTAAGTGCTGATATTTTCTCGAGGATGTGGAATCTT AAGTTCCTCAAGTTCTACAATTCTCATTGTTCCAAGTGGTGTGAGAATGATTGTAGATTACGTTTTCCCAAGGGGCTTGA TTGCTTTCCAGATGAGCTGGTTTATCTCCACTGGCAAGGGTACCCTCTGGAGTATCTACCATCCAACTTCAACCCGAAGA AACTCGTTTATCTTAATCTGCGTTATAGCAACACTATGCAACTGTGTGAAGATGAGAAGAACACAGGAGAGTTAAGGTGG GTCGATCTCAGTTATTCAAAAGAGTTGATGAATCTAACTGGCTTGTTGGAAGCTCGTAAACTCGAGAGACTGAATCTTGA AAACTGTACAAGTTTAACCAAGTGTTCAGCGATCCGGCAGATGGACAGTCTTGTTTCACTGAATCTCAGAGATTGCATAA ACCTCAAGAGTCTTCCAAAGAGAATCAATTTGAAGTCTCTGAAGGTTGTTATCCTCAGTGGATGTTCAAAACTCAAGAAA TTTCCAACTATCTCAGAAAACATAGAATCTCTGTATTTGGATGGCACAGCGGTAAAAAGAGTTCCTGAATCCATAGAAAG TCTCCAGAAACTTACTGTGTTGAATCTGAAGAAGTGTTCCAGGTTGATGCATCTTCCTACCACTCTTTGCAAGCTGAAGT CTCTTAAAGAGCTGCTTCTCTCTGGATGTTCAAAGCTAGAGAGTTTCCCGGACATCAACGAAGACATGGAAAGCTTAGAG ATTCTGCTCATGGATGATACAGCCATCAAACAAACTCCCAGAAAAATGGATATGAGCAATCTCAAGCTGTTCTCATTTGG TGGATCTAAAGTCCATGATCTCGCGTGTTTGGAGCTGCTGCCTTTCTCTGGCTGCTCGCGGTTGTCAGACATGTATCTCA CAGACTGTAATCTGTACAAGTTGCCAGACAGCTTTAGCTGCTTATCCTTGCTGCAGACTTTATGCTTGAGCAGAAACAAT ATCAAGAATCTACCTGGAAGCATCAAGAAACTTCATCATCTCAAATCTCTTTACTTGAAGCATTGTCAAAACCTCGTTTC TCTTCCAGTGCTTCCATCAAATCTGCAGTATCTGGATGCTCATGGCTGTATCTCGCTCGAAACAGTAGCTAAACCCATGA CGCTTCTTGTGGTAGCTGAAAGGAACCAGTCTACTTTCGTCTTCACTGATTGTTTCAAGCTAAACAGAGATGCGCAAGAA AGTATTGTGGCTCATACTCAACTCAAGAGTCAAATACTGGGGAATGGATCCATTCAACTTAATCATAAGGGACTAGTTTC AGAACCTCTAGCTAGTGTAAGTTTTCCAGGAAACGATTTGCCATTATGGTTCCGCCATCAGAGAATGGGATCTTCAATGG AAACTCACCTGCCTCCACACTGGTGCGACGATAAGTTCATCGGACTTTCTCTCTGCGTAGTTGTCTCATTCAAGGACTAT GTAGATAAAACCAACCGATTCTCAGTGATATGCAAGTGCAAGTTCAGAAACGAGGACGGTGACTGCATCAGCTTTACTTG TAATCTTGGAGGATGGAAAGAGCAATGTGGATCATCATCTAGCCGCGAAGAAGAACCAAGAAAACTTACCTCTGATCACG TCTTCATCAGCTACAACAACTGCTTCCATGCCAAGAAAAGCCATGATCTCAACCGATGTTGCAACACCACAGCCTCGTTC AAATTCTTTGTTACTGATGGTGTAGCTAAAAGAAAGCTAGATTGCTGTGAGGTTGTGAAATGTGGGATGAGCTTGTTATA TGCACCTGATGAGAATGATTGTAGATTGCAGGGATTACAGGAGAGTAGCCTCGAGAAAGCTGTATCTGGAAAAGAAACTG AAACCGCTGTGGATGAAGCTGTTGTGTCTAAGAGAGGCCGTTTCTGTATACCAGAAGAGCTACTAAATGGGAAAAGAATA AAGAAAGAAATCTCTTTTGCTGATTGTGACTGTTCTGTTCTTAGTTACATATAG |
| AA seq | Len:1218 aa MAATSSCKSDPSRRQYDVFLSFRGTDTRHSFTCYLLDFLRRKGIDAFIDEELRRGNDLSALLERIEQSKISIVVFSENYA DSAWCLEELAKIMECKRTFDQVVLPVFYKVPASDVRYQTGKFGAPFERSEEVFQGSEHRVPAWKEALRASSDIAGYVLPE RSPECDFVDKIAKETFKVLNKLSPSEFRGLPGIESRMMELEKLIAFEETGCVRIVGVLGMAGIGKTTVADCVYKQNYNRF DGYCFLANVQNESKLHGLDHLQRKLLRKLLDEENLDVGAPEGAHEAFKDRLRNKKLFIVLDDVANENQLRNLIGGAGQEL YREGTRIVITTSNKKLLEKVVNETYVVPRLSGRESLELFCLSAFSSNLCATPELMDLSNKFVDYSKGHPLALKLLGSDLC QRDKSYWKLKWERLQRRPDGKIHDVLKVSYEELCEEEQSIFLDVACFFRTEKLDFVSRVLSTYHTDASTLISDLIDKCLI TVSDNRLEMHDLLLTMGREVGYESSIKEAGNRSRLWNQEDICRVLKYKTGTAETRGIFLDMSNVDSMKLSADIFSRMWNL KFLKFYNSHCSKWCENDCRLRFPKGLDCFPDELVYLHWQGYPLEYLPSNFNPKKLVYLNLRYSNTMQLCEDEKNTGELRW VDLSYSKELMNLTGLLEARKLERLNLENCTSLTKCSAIRQMDSLVSLNLRDCINLKSLPKRINLKSLKVVILSGCSKLKK FPTISENIESLYLDGTAVKRVPESIESLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSKLESFPDINEDMESLE ILLMDDTAIKQTPRKMDMSNLKLFSFGGSKVHDLACLELLPFSGCSRLSDMYLTDCNLYKLPDSFSCLSLLQTLCLSRNN IKNLPGSIKKLHHLKSLYLKHCQNLVSLPVLPSNLQYLDAHGCISLETVAKPMTLLVVAERNQSTFVFTDCFKLNRDAQE SIVAHTQLKSQILGNGSIQLNHKGLVSEPLASVSFPGNDLPLWFRHQRMGSSMETHLPPHWCDDKFIGLSLCVVVSFKDY VDKTNRFSVICKCKFRNEDGDCISFTCNLGGWKEQCGSSSSREEEPRKLTSDHVFISYNNCFHAKKSHDLNRCCNTTASF KFFVTDGVAKRKLDCCEVVKCGMSLLYAPDENDCRLQGLQESSLEKAVSGKETETAVDEAVVSKRGRFCIPEELLNGKRI KKEISFADCDCSVLSYI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich repeats (2 copies) |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |