Names & Information
Knowledge of BnaC07G0425200GG:
| Gene Name | BnaC07G0425200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g37000D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3210 nt ATGAGATTTCCATCGTTTTTGAAAGAAATTAAGAAACAGAGAAAGATAGTAGAAAAGAGAAAGAAGAGGAAACCGGATGA GCTTTCAAATCCGATTGCCAAACCAGTGAGAAAGAAAATCCGATTGCAAAACCAGAGCCAAACTCAAGTCCCATCATCAC CTCAGTCTTCTTTGTCTCCTTCATCACCTCCGTCTCCTGTGTCTCCATCATCACCTCCGTCTCTTTCGTCTCCTTCACCA CCTCAGTCTTCGTTGTCTCCACTACCACCTCTGTCTGCTTTGTCTCCTTCATCCGCTCCATCTTCTTCCTCTCACGTCTG GTTACACGATGTCTTTCCGAGCTTCCGTGGGGAAGATGTCCGCAAAAACTTTCTTAGTCACATTAAAAAGGAGTTTAAAA GAAAGACAATCACATTTTTCAACGATAATGGGATCCAGAGAGGAGAGTCCATCGCTCCTGAACTCATACGGGGGATTAGA GGATCTAAGATCGCGGTCGTCTTGCTCTCTAAGAACTATGCTTCTTCTAAGTGGTGTCTTGAGGAGTTGGTGGAGATTAT GAACTGCAGGGAGGAGCTGGGTCAAACTGTGATGGCCATTTTCTACAAAGTAGATCCATCTGATGTAAAGAAGCTGAACG GTGATTTTGGGAAGGTGTTCAGAAAAACTTGTGAGGGTAAATCTAAGGAGGACATTAGGAGGTGGAAACAAGCTTTGGAG AAGGTGGCCACAATAGCTGGTTACCATTCGTGCAACTGGGTTGATGAAGCTGCCATGATCGAGGATATATCCACCGATGT TTTTAACAAGCTGAATAATTCTGCGCAATCGAGTGATTTCGACAATCTCGTTGGGATGAGTACTCATATGATAAAACTGA AACTGTTGCTACGCCTAGGCTCCAATGAAGTGAGGATGATAGGGTTTTGGGGTCCTTCTGGAATTGGTAAGAGTACCATC GCAAGAGTTCTATTTAGCCAATACTCTCGTGAGTTCCAGTTTAGTGTCTTTATGGAGAATATTAAAAGACGTTTTGGCAG ACCTTACTATGATGAGTACAGTGCGAAACTGCAATTACAAAAAGAGTTCATGTACCAAATAATCAACCAAGAAGATATGA AGATTCAGCATTTAGGAGTTGTGGAAGACAGGTTAAAAGACAAGAGAGTGATTGCCATTCTTGATGACGTGGATCATTCA ATGCAAATAGATGCCATAGCGAAAGAAGCTCGGTGGTTTGGTCCTGGAAGTCGGATAATTATCACAACACAAGATAAAAG GCTTTTAAATGCACGTAGGATTGACGATATTTACGAGGTGGAGTTTCCACCTGACGACGAGGCTCTTGAAATTTTCTGCA TGTATGCTTTTGGCCAAAAGTCTCCACATGATGGATTTAAGGAACTTGCTTGGGAAGTTACAAAACTTGCCGGTAATCTC CCTTTGGGACTAAAGGTTATAGGATCTTATTTCGAAGGAAGGCCCAAGCAGGAGTGGGAAGAGGATTTACCAAGGTTAAG AAGTATACTTGATGGAGAAATAGAAAGTATTTTAAAGTTCAGTTACGATGCCTTATGCGTTGATGATCAAGATTTATTTC TTCATTTAGCTTGCTTTTTCAACGATGAAACGCTTGAAATTGTGGAAGGGTGTCTTGAAAAGAATTTTGTTGGTGTGAAA GGTCGTCTCCGTGGTTTAGCTGAGAAATCTTTCATATCCTTCGAGTGGGGATATACAGAAATCCATGATTTGTTAGCACG TTTTGGTAGAGAGATTGTTCGTAAACAATCCATTCGTGAACCTGGGCAGCGCCAGTTTTTGGTTGATGCTGGAGATATAT GTCAAGTACTACGTAACGATACACTAGGTAGTCGAAATGTTATAGGCATAGATTTGGACTTTTCAAAGTTGGATATGGAG TTGAAGATAAGTGACGGAGTTTTTGAAAGAATGTCCAATGTCCAATTCTTAAGAGTCAGAGACACGAAGCCATATCCTCA CAGCATAGACCCCATGACATGTCTGCCCCGAAATCTAAGAATTTTGCATTGGGATTATTTTCCGCTGACATGTCTGCCTT CTAATTTTAATCCTGAGTTCCTGGTGAAAATAATATTAACTGAAAGCAACTACCTTGAGAAATTATGGGAAGGAAATAAA ACGATTAGAAATCTGAAATTGATGAATTTGACGGACTCCGAAAATCTAAAGGAGCTTCCTGATCTCTCAACTGCCACTAA TCTGCAAACATTGAATCTTTTTGGTTGCTCAAGTCTAACGGAAATCCCCTTTTCTATTGGAAATGCTATCAATCTCCGGC ATTTGGATCTTACAAATTGCTCAGGTCTAGTGGAGTTCCCCTCTTCTATGGAAAATGTCACTACTCTCGAGGAATTGCTT CTCACGGGATGCTCACATCTAGCTAATCTCCCACCTTGTATTGGTAATCTCAAGACGTTGTATCTCGAGAATTGCTCAAG TTTGGTGGAGCTTCCATCTTCTGTTAGAAATTCCTTGAATCTCAAGACTTTTTTGTCTAGTGGTTGCTCAAATCTTGTGG AGCTCCCTTTGTATATTCCCGTCAAGAAATTTGAATTGCGAGGATGCTCAAGTCTACGGGAGCTCCCTTCTTCTATTGGG AATATGACTAATCTTGAGGAGTTGTATCTTGGTGGATGCTCAAGTCTTGTTGAGCTCCCTTCTTCCATTGGGAATATGAC TAATCTCAGGAAGTTGTCTCTTAATGGATGCATAAGTCTTGTGAAGCTCCCCTCTTCCATTGGGAATATGACTAATCTTG AGGAGTTGTATCTTGGTGGATGCTCAAGTCTTGTGAAGCTCCCCTCTTCCGTCGGGGATATGAGTAATCTCAGGAAGTTG TATCTCGAAAGTTGCTCAAACCTAACGGCCCTTCCGATCAATATCAACATGAAATCTCTTGATGAACTTGTTCTCACTGA CTGCTCTTCATTGAAAATCTTTCCCGAGATTTCCACAAACATCAGCGTTCTAAAGCTCGCTGGAACTGCAATAGAAGAAT TGCCTCCATCAATCATGTCATGGCCTCATCTTCGTGAGCTTACAATCAAGGGATGCACGAAGCTGGTGTCTCTTCCGCAG CTTCCGGACTCCTTAGAATTCCTAGACGCAGACAATTGTGGGTCCCTCGAAAGACTCGATTGCTCAGATTTGTTAACTGC TTTAAACTGA |
| AA seq | Len:1070 aa MRFPSFLKEIKKQRKIVEKRKKRKPDELSNPIAKPVRKKIRLQNQSQTQVPSSPQSSLSPSSPPSPVSPSSPPSLSSPSP PQSSLSPLPPLSALSPSSAPSSSSHVWLHDVFPSFRGEDVRKNFLSHIKKEFKRKTITFFNDNGIQRGESIAPELIRGIR GSKIAVVLLSKNYASSKWCLEELVEIMNCREELGQTVMAIFYKVDPSDVKKLNGDFGKVFRKTCEGKSKEDIRRWKQALE KVATIAGYHSCNWVDEAAMIEDISTDVFNKLNNSAQSSDFDNLVGMSTHMIKLKLLLRLGSNEVRMIGFWGPSGIGKSTI ARVLFSQYSREFQFSVFMENIKRRFGRPYYDEYSAKLQLQKEFMYQIINQEDMKIQHLGVVEDRLKDKRVIAILDDVDHS MQIDAIAKEARWFGPGSRIIITTQDKRLLNARRIDDIYEVEFPPDDEALEIFCMYAFGQKSPHDGFKELAWEVTKLAGNL PLGLKVIGSYFEGRPKQEWEEDLPRLRSILDGEIESILKFSYDALCVDDQDLFLHLACFFNDETLEIVEGCLEKNFVGVK GRLRGLAEKSFISFEWGYTEIHDLLARFGREIVRKQSIREPGQRQFLVDAGDICQVLRNDTLGSRNVIGIDLDFSKLDME LKISDGVFERMSNVQFLRVRDTKPYPHSIDPMTCLPRNLRILHWDYFPLTCLPSNFNPEFLVKIILTESNYLEKLWEGNK TIRNLKLMNLTDSENLKELPDLSTATNLQTLNLFGCSSLTEIPFSIGNAINLRHLDLTNCSGLVEFPSSMENVTTLEELL LTGCSHLANLPPCIGNLKTLYLENCSSLVELPSSVRNSLNLKTFLSSGCSNLVELPLYIPVKKFELRGCSSLRELPSSIG NMTNLEELYLGGCSSLVELPSSIGNMTNLRKLSLNGCISLVKLPSSIGNMTNLEELYLGGCSSLVKLPSSVGDMSNLRKL YLESCSNLTALPININMKSLDELVLTDCSSLKIFPEISTNISVLKLAGTAIEELPPSIMSWPHLRELTIKGCTKLVSLPQ LPDSLEFLDADNCGSLERLDCSDLLTALN* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | - |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |