Names & Information
Knowledge of BnaC07G0425300GG:
| Gene Name | BnaC07G0425300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g37010D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3402 nt ATGTCTTCATCTTTGTGTATTATCTTTTCTCTTGTTAGGGATGATGAAGCATCAATGGTCGAAGAAATCGCCACTAATGT TTCGAATGACCTAATTAATTTTGTGATATCAAGTGATTTCGAAGGTTTTGCTGGGATGGAAGCTCATATGAAAAAGATGG AGCCGTTCTTACTCTTAGGCTCCAATGAAGTGAGGATAATAGGGATTTGGGGTCCTTCTGGAATTGGTAAGAGCACCATC GCCAGAGTTCTATTTAGCCAGCACTCTCATGAGTTCCAGCTTAGTGTCTTCATGGAGAATATCAAAAGACGTTGTCCAAG ACCTTGTTCTGATGAATATAGCGCGAAACTGAAATTACAGGAAGAGTTCTTATCTAAAATAATCAACCAGGAGGATGTCA AGATTCATCATTTAGGAGTTGCGCCAGACAGGTTAAAAGACAAGAGAGTGCTTGTCGTTCTCGATGATGTAGACCATTTA ATGCAACTAGATGCCATGGCAAAAGACCATAGCTGGTTTGGTCCTGGAAGTCGGATTATTGTCACAACACAAGATAAAAA AATCTTGACTGCACATGGGATTAACCATATTTACAAGGTTGAGTATCCAGGTTTCAGTGATGCTTTTGAAATCTTCTGCA TGTATGCTTTTGGTCAAAAGTCCCCATACGATGGCTTCGAGAAACTTGCTTGGGAAGTTAAAGAATTTGCCGGTAATCTC CCTCTGGGACTAAAGGTAATGGGATCTTATTTCAAAGGAATGCTCAAGCATGAGTGGGAAGAGGAACTACCAAGGTTAAG TGCTAGACTTGATGGAGAAATAGAAAGTAGTTTAAAGTTACGTTATGATGCCTTATCTGTTGATACTCAAGATTTATTTC TTCACTTAGCTTGCTTTTTCAACAATGAGCGGATTGAGAAAGTGGAAGAGTATCTTGCAAGGAATATTGTCGGTGTGAAA GGTCAGCTCCGTGTCTTAGCTGAGAAATCTTTCATATCCATTGTTGGGGGATATATAAAGATCCATGATTTGCTTGCACG TTTGGGTAGAGAAATTGTTCGTAAACAATCCATTCACGAACCTGGGCAGCGTCAGTTTTTGGCTGATGTTGGAGATATAT GCCAAGGTAGTCGAAGTGTTATAGGCATAGATTTGAAGCTTTTAGAGTTGGAGACAGAGTTGAAAATAAGTGAAAGGGCC TTTGAAAGAATGTCCAATGTTCAATTCTTAAGACTTTTGCTTTCTGATTCTGATTCTGATTCTGGTTCTGACTATGGACG TCCCAAACAGACATGTCATCACAGCATAGATCTAATGACATGTCTGCCTCCAAATCTTAAACTTTTGCATTGGGATTTTT TTCCGATGACATGTCTGCCTTCTAATTTTATTTCGGAGTTCCTGGTGGAAATAGCCTTGCGTAAAAGCAACTATCTTGAG AAATTGTGGGAAGGAAATAAAACGATTAGAAATCTCAAATGGATGTATTTGTCGGATTCCAAAAATCTAAAGGAGCTTCC TGATCTCTCAACTGCCACTAGTCTCCAAGAATTGAATCTTCATGGTTGCTCAAATCTAGCGGAGCTCCCTTTTTCTATTG GAAATGTTATCAGTCTCCGAAGATTAAATCTTAGTCATTGTTCAAGTCTAGTAAGGATCCCCTCTTTTATTTGGAATCTA ATTAATCTTGGAAGATTGGATATTAGTCATTGCTCAAGTCTAGTGAGACTTCCATCTTCTTCTGGGAATGCTATAATTAA ACTCAAAGTATTGGATCTTAGTGGTTGTACAAGTCTGATGGAACTCCCCTCTTCTATGGAAAATGCCACTGATCTCGAGG AATTGAATCTCACGGGATGCTTACGTCTAGCTAAGCTCCCATCCTCTATTGGTAATCTCAAGAAATTGTATCTCAAAGAT TGCTCAAGTTTGGTGGAGCTTCCATCTTCTGTTAGAAATTCCATTAATCTCAAGGATTTTACTTTTAATGGTTGCTCAAA TCTTGTGGAGCTCCCTTTCTATCTTGGTAATGCCACTGATCTCAAAAAAATTGATTTGAGTGGATGCTCAAGTCTACAGG AGCTTCCCTCTTCTATTGGAAATATGACTAATCTCATGCATCTGTATCTCGATGAATGCTCAAGTCTACTGGAGCTCCCC TCTTCTATTGGAAATATGACTAGTCTCTTGTATTTGTATCTCAATGAATGCTCAAGTCTGGTGGAACTCCCGTCTTCTAT TGGAAATATAAATAATCTCATGAAGTTACATCTTAATGGATGCTCAAGTCTTGTGGAACTCCCATCTTCTATTGGAAATA TGAATAATCTCGGGAACTTGTACCTTAATGGATGCTCAAGTCTTGTGGAACTCCCATCTTCTATTGGAAATATAAATCAT CTCAGGAAGTTGTCTCTTAATGGATGCTCAAGTCTTGTAGAACTCCCATCTTCTATTGGACATATGAATCATCTCAGGAA GTTGTATCTCGAAAGATGCTCAAAGCTAAGGGCCCTTCCCATCAACATCAACATGAAATCTCTTGGTAAACTTTTTCTCA CTGACTGCTCGTCATTGAAATGCGTTCCGGAGATTTCCACAAACATCAGCGTTCTAAAGCTCACTGGAACTTCAATAGAA GAATTACCTCGATCAATAATGTCATGGCCTCGTCTTCGTGAGTTACACTTGAGCGACACAAGAATACAAGAAATTGCTCC ATGGGTCAAGGAAAGGTCTAGTCTACGTGAACTTGTAATCAAGGGATGCACGAAGCTGGTTTCTCTTCCGCAGCTTCCGG ACTCCTTAAAGTTCCTCGTCGCAGACAATTGTGGGTCCCTCGAGAGACTGGATTGCTCTTTTTACAAGACAAAGTTTCAT GGGCTCAGCTTTGTTAACTGCTTTGGACTGAATCAAGAAGCAAGAGAGATTATCATCAACACATGGACAAGAGACTTTGC AATTTTTCCAGGAGAAACAGTGCCTACATATTTCAATTACCGAGCCACCAGGAGTTCCCTGTCAATGACGTGGAATGGAT TAGATACACAGTACTTTCCTACATCCTTGAGATTTAAAGCTTGCCTCTTGCTGGTTTATAAGGGTGACGTTGATGCTGAT GATTGGTGCTGGCCTGATATATCATATTGCATCAAGGACAAACTGAATAGTGTTAAATCTGGTTACGCAGCTTATGCTGA TTTATGGCACCGCTCTTCTCCAACTTCAAAGGAGCATCTGCTGGTATTCAAAATTGAAGAAAAAGTGGGCTCCCCCGAAT TAGCCTTTGAGTTCAGATCCCATGACAAAAATTGGGAGATTGAGGAATGCGGGCTACGTCCTCTGGAAAGTTGGAAACAA TTGCTTTGGAATCCTTGGCTCCCTCATGTTCATGGAAGCTGA |
| AA seq | Len:1134 aa MSSSLCIIFSLVRDDEASMVEEIATNVSNDLINFVISSDFEGFAGMEAHMKKMEPFLLLGSNEVRIIGIWGPSGIGKSTI ARVLFSQHSHEFQLSVFMENIKRRCPRPCSDEYSAKLKLQEEFLSKIINQEDVKIHHLGVAPDRLKDKRVLVVLDDVDHL MQLDAMAKDHSWFGPGSRIIVTTQDKKILTAHGINHIYKVEYPGFSDAFEIFCMYAFGQKSPYDGFEKLAWEVKEFAGNL PLGLKVMGSYFKGMLKHEWEEELPRLSARLDGEIESSLKLRYDALSVDTQDLFLHLACFFNNERIEKVEEYLARNIVGVK GQLRVLAEKSFISIVGGYIKIHDLLARLGREIVRKQSIHEPGQRQFLADVGDICQGSRSVIGIDLKLLELETELKISERA FERMSNVQFLRLLLSDSDSDSGSDYGRPKQTCHHSIDLMTCLPPNLKLLHWDFFPMTCLPSNFISEFLVEIALRKSNYLE KLWEGNKTIRNLKWMYLSDSKNLKELPDLSTATSLQELNLHGCSNLAELPFSIGNVISLRRLNLSHCSSLVRIPSFIWNL INLGRLDISHCSSLVRLPSSSGNAIIKLKVLDLSGCTSLMELPSSMENATDLEELNLTGCLRLAKLPSSIGNLKKLYLKD CSSLVELPSSVRNSINLKDFTFNGCSNLVELPFYLGNATDLKKIDLSGCSSLQELPSSIGNMTNLMHLYLDECSSLLELP SSIGNMTSLLYLYLNECSSLVELPSSIGNINNLMKLHLNGCSSLVELPSSIGNMNNLGNLYLNGCSSLVELPSSIGNINH LRKLSLNGCSSLVELPSSIGHMNHLRKLYLERCSKLRALPININMKSLGKLFLTDCSSLKCVPEISTNISVLKLTGTSIE ELPRSIMSWPRLRELHLSDTRIQEIAPWVKERSSLRELVIKGCTKLVSLPQLPDSLKFLVADNCGSLERLDCSFYKTKFH GLSFVNCFGLNQEAREIIINTWTRDFAIFPGETVPTYFNYRATRSSLSMTWNGLDTQYFPTSLRFKACLLLVYKGDVDAD DWCWPDISYCIKDKLNSVKSGYAAYADLWHRSSPTSKEHLLVFKIEEKVGSPELAFEFRSHDKNWEIEECGLRPLESWKQ LLWNPWLPHVHGS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeats (6 copies) |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |