Names & Information
Knowledge of BnaC07G0429400ZS:
| Gene Name | BnaC07G0429400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: TMV resistance protein N-like [Brassica rapa] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:3678 nt ATGGCTGCTACATCTTCCTGCAAATCCGATCCTTCCCGCCGTCAGTACGACGTGTTTCTCAGCTTCCGAGGCACAGACAC GCGCCACTCCTTCACCTGCTATCTCCTCGATTTTCTTCGCCGGAAAGGGATCGACGCTTTCATCGATGAGGAACTCCGGC GAGGCAACGATCTCTCGGCGCTTCTCGAACGAATCGAGCAATCGAAGATCTCCATCGTCGTTTTCTCCGAGAATTACGCG GATTCCGCGTGGTGCTTAGAGGAACTCGCCAAGATCATGGACTGCAAGAGGACCTTCGATCAGGTGGTTTTGCCGGTCTT CTACAAAGTTCCGGCGTCGGACGTGAGGTACCAGACTGGGAAATTCGGAGCTCCGTTCGAACGATCTGAAGAGGTCTTCC AGGGATCTGAACACAGAGTTCCGGCGTGGAAAGAAGCTCTAAGAGCTTCATCTGATATCGCCGGCTATGTGCTTCCGGAG AGAAGCCCGGAGTGTGACTTTGTCGACAAAATTGCCAAGGAAACGTTCAAGGTGATAAACAAGTTGTCTCCATCAGAATT TCGTGGTCTTCCAGGCATTAAATCACGTATGATGGAGCTAGAAAAGTTAATTGACTTTGAAGAGACAAGCTGTGTGCGAA TCGTCGGAGTTCTTGGGATGGCTGGGATTGGCAAGACAACTGTTGCAGACTGTGTGTATAAGCAGAACTACAATCGCTTT GATGGTTACTGCTTTCTTGCAAACGTTCAGAACGAGTCAAAGCTACATGGATTAGACCATTTGCAGCGGAAACTCCTCCG TAAGTTATTAGATGAAGAGAATATTGATGTTGGAGCTCCTGAAGGTGCCCACGAAGCCTTTAAGGATCGTCTTCGGAACA AGAAACTGTTTATTGTGCTCGACGATGTGGCCAACGAAAATCAACTGAGAAATCTTATTGGTGGAGCAGGACAAGAGCTG TACCGAGAAGGAACACGGATTGTTATAACAACAAGTAACAAGAAACTCCTAGAAAAGGTTGTCAATGAAACATACGTGGT TCCGAGGTTGAGCGGAAGAGAGAGTCTGGAGCTTTTCTGCTTGAGTGCCTTTTCTAGTAATCTCTGCACCACTCCGGAGC TAATGGATCTATCAAACAAGTTTGTGGATTATTCTAAAGGACATCCACTAGCTCTGAAGCTGTTAGGTTCTGATCTATGT CAAAGAGATAAGTCTTACTGGAAGTTGAAATGGGAGAGGTTGCAGAGAAGACCAGATGGGAAGATCCATGACGTGCTGAA AGTGAGCTATGAGGAGCTATGTGAGGAAGAACAGAGCATTTTTCTTGATGTTGCTTGCTTCTTTAGATCAGAGAAGTTGG ACTTTGTTTCGAGTGTTCTGAGCACTCACCATACTGATGCTTCTATTCTGATTAATGACCTTATTGACAAGTGCTTGATA ACAGTCTCGGATAACCGGCTTGAGATGCATGACTTACTGCTTACTATGGGGAGGGAAGTTGGTTATGAATCATCCATCAA AGAAGCAGGTAACAGAGGAAGGTTATGGGACCAAGAAGACATCTGTCGTGTTTTAAAGTACAAAACGGGCACTGCAGAGA TCAGAGGCATCTTCCTAGATATGTCTAATGTATATAGCATGAAGCTAAGTGCTGATATTTTCTCGAGGATGTGGAATCTC AAATTCCTCAAGTTCTACAATTCTCATTGTTCCAAGTGGTGTGAGAATGATTGTAGATTACGTTTTCCCAATGGGCTTGA TTGTTTTCCAGATGAGCTGGTGTATCTCCACTGGCAAGGGTACCCTCTGGAGTATCTTCCATCGAACTTTAACCCGAAGA AACTCGTTGATCTTAGTCTGCGTTATAGCAACATTATGCAACTGTGGGAAGATGAGAAGAACACAGGAGAGTTAAGGTGG GTCGATCTCAGTTATTCAAAAGAGTTGATGAATCTAACTGGCTTGTTGGAAGCTCGTAAACTCGAGAGACTGAATCTTGA AAACTGCACAAGTTTAACCAAGTGTTCAGCGATCCGGCAGATGGACAGTCTTGTTTCACTGAATCTCAGAGATTGCATAA ACCTCAAGAGTCTTCCAAAGAGAATCAATTTGAAGTCTCTGAAGTTTGTCATCCTCAGCGGATGTTCAAAACTCAAGAAA TTTCCAACTATCTCAGAAAACATAGAATCTCTGTATTTGGATGGCACAGCGGTTAAAAGAGTTCCTGAATCCATAGAAAG TCTCCAGAAACTTTCGGTGTTGAATTTGAAGAAGTGTACCAGGTTGATGCATCTTCCTACCACTCTTTGCAAGCTGAAAT CTCTCAAAGAACTGCTTCTCTCTGGATGTTCAAAGCTAGAGATTTTCCCGGACGTCAACGAAGACATGGGAAGCTTAGAG ATTCTGCTCATGGATGATACAGCCATCAAACAAACTCCCAGAAAAATGTATATGAGCAATCTCAAGCTGTTCTCATTTGG TGGATCTAAAGTCCATGATCTCACGTGTTTGGAGCTGCTGCCTTTCTCTGGCTGCTCGCGGTTATCAGACATGTATCTCA CAGATTGTAATCTGTACAAGTTGCCAGACAGCTTTAGCTGCTTATCCTTGCTGCAGACTTTATGCTTGAGCAGAAACAAC ATCAAAAATCTACCTGGAAGCATCAAGGAACTTCATCATCTCAAATCTCTTTACTTGAAGCATTGCCAAAACCTCGTTTC TCTTCCAGTGCTTCCATCAAATCTGCAGTATCTGGATGCTCATGGCTGTATCTCACTCGAAACAGTAGCTAAACCCATGA CGATTATTGTGGTAGCTGAAAGGAGCCAGTCTACTTTCGTCTTCACTGATTGTTTTAAGCTAAACAGAGATGCGCAAGAA AGTATTGTGGCTCATACTCAACTCAAGAGCCAAATACTGGGGAATGGATCCATTCAACGTAATCATAAGGGACTAGTTTC AGAACCTTTAGCTAGTGTAAATTTTCCAGGGAACGATTTGCCATTATGGTTCCGCCATCAGAGAATGGGATCTTCCATGG AAACTCACCTTCCTCCCCACTGGTGCGACGATAAGTTCATAGGACTTTCACTCTGTGTAGTTGTCTCATTCGAGGACTAT GTAGATAAAACAAACCGATTCTCAGTAATATGCAAGTGCAAGTTCAGAAACGAGGACGGTGATTGCATCAGCTTTACTTG TAATCTCGGAGGATGGAAAGAGCAATGTGGATCATCATCTAGCTGCGAAGAAGAACCAAGAAAGCTTACCTCTGATCACG TCTTCATCAGTTACAACAACTGCTTCCACGCCAAGAAAAGCCATGATCTCAGCCGATGTTGCAACACCACAGCCTCGTTC AAGTTCTTTGTTACCGATGGTGTATCCAAAAGAAAGCTAGATTGCTGTGAGGTGGTGAAATGTGGGATGAGCTTGTTATA TGCACCTGATGAGAATGATTGTAGATTGCAGGGATTACAGGAGAGTAGCCTCGAGAAAGCTGTATCTGGAAAAGAAACTG AAACCGCTGTGGATGAAGCTGTTGTGTCTAAGAGAGGCCGTTTCTGTATACCAGAAGAGCTACTAAATGGGAAAAGAATA AAGAAAGAAATCTCTTTTGCTGATTGTGACTGTTCTGTTCTTAGTTACATAGAGCCAGCAAAGCCTAACCTCTGGTAA |
| AA seq | Len:1226 aa MAATSSCKSDPSRRQYDVFLSFRGTDTRHSFTCYLLDFLRRKGIDAFIDEELRRGNDLSALLERIEQSKISIVVFSENYA DSAWCLEELAKIMDCKRTFDQVVLPVFYKVPASDVRYQTGKFGAPFERSEEVFQGSEHRVPAWKEALRASSDIAGYVLPE RSPECDFVDKIAKETFKVINKLSPSEFRGLPGIKSRMMELEKLIDFEETSCVRIVGVLGMAGIGKTTVADCVYKQNYNRF DGYCFLANVQNESKLHGLDHLQRKLLRKLLDEENIDVGAPEGAHEAFKDRLRNKKLFIVLDDVANENQLRNLIGGAGQEL YREGTRIVITTSNKKLLEKVVNETYVVPRLSGRESLELFCLSAFSSNLCTTPELMDLSNKFVDYSKGHPLALKLLGSDLC QRDKSYWKLKWERLQRRPDGKIHDVLKVSYEELCEEEQSIFLDVACFFRSEKLDFVSSVLSTHHTDASILINDLIDKCLI TVSDNRLEMHDLLLTMGREVGYESSIKEAGNRGRLWDQEDICRVLKYKTGTAEIRGIFLDMSNVYSMKLSADIFSRMWNL KFLKFYNSHCSKWCENDCRLRFPNGLDCFPDELVYLHWQGYPLEYLPSNFNPKKLVDLSLRYSNIMQLWEDEKNTGELRW VDLSYSKELMNLTGLLEARKLERLNLENCTSLTKCSAIRQMDSLVSLNLRDCINLKSLPKRINLKSLKFVILSGCSKLKK FPTISENIESLYLDGTAVKRVPESIESLQKLSVLNLKKCTRLMHLPTTLCKLKSLKELLLSGCSKLEIFPDVNEDMGSLE ILLMDDTAIKQTPRKMYMSNLKLFSFGGSKVHDLTCLELLPFSGCSRLSDMYLTDCNLYKLPDSFSCLSLLQTLCLSRNN IKNLPGSIKELHHLKSLYLKHCQNLVSLPVLPSNLQYLDAHGCISLETVAKPMTIIVVAERSQSTFVFTDCFKLNRDAQE SIVAHTQLKSQILGNGSIQRNHKGLVSEPLASVNFPGNDLPLWFRHQRMGSSMETHLPPHWCDDKFIGLSLCVVVSFEDY VDKTNRFSVICKCKFRNEDGDCISFTCNLGGWKEQCGSSSSCEEEPRKLTSDHVFISYNNCFHAKKSHDLSRCCNTTASF KFFVTDGVSKRKLDCCEVVKCGMSLLYAPDENDCRLQGLQESSLEKAVSGKETETAVDEAVVSKRGRFCIPEELLNGKRI KKEISFADCDCSVLSYIEPAKPNLW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |