Names & Information
Knowledge of BnaC07G0429800ZS:
| Gene Name | BnaC07G0429800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g35960D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:3474 nt ATGGCTGCCTCCTCCACTGTCCGCAGCGTACCTAAGCACCAAGTGTTCCTTAATTTCCGTGGGGAACTTCGTTATCAGTT CATCAGCCATCTAGCTAAGGCCTTGACAGATAAAAATATCCAGATCTTCATTGATGAGGATGCGGAGAAAGGCCAACCTC TAAGTAATCTTTTCAAGGAGATCGAAAAGTCGAGAATCGCACTGGCTGTCTTTTCCAAATTGTACACAGAGTCAAATTGG TGCTTGGACGAGCTAGAAAGAATAAAAGAACGCACGAAAGCCGGCGAGCTCAAGACCATTCCCATCTTCTACAACGTGGA CCCTAAAACCGTTAGGTATCAGACGGGAGAATTTGGCGATGCCCTCAGGAAAAATGAAAAGAGAGGTGTTACTGATGATA AAATGGAAAATTGGAAAGAGGCTCTGGCGTATGTTAGCAACCTTTTGGGCTTCGAATTTGACGGAAAAAGCAACGAGAAC ACGTTCATAAATAAAATCGTCAACGAGGTTTTGCAAGCGCTGAACAAAATTCCGTTAGAAGAAAGCACACATGGAACATG CGTGGAACATGCACAAAACACCAGAGGAGAAGAACAAGAAGAAGAGGAGGAGGCAGGTCAGATTTGTGGGCTCAAACAAC GCCTGGAGGAACTGGAAGAAACAGTAGACATTCATGGTGTGGAGACTCGTATTGTCCAAGTTGTTGGGATGCCAGGCATT GGTAAAACCACTCTCTTGAAAGCGTTCTACAATGAGTGGTACAGCAGGTTCTTCAGACGCGTCTTACTCCAAAATATAAG CGGCATTGTAAAGCAATGGGGATTGGAACGCTTGCCCGTGATGCTCCTCAGGGAGTTGCTTGGTAATGACGACATAGAAG ATGATGGGACATACGAAGAATACAAGGAAAAACTATGTAAAGAAAAAGTTTTCATTGTTCTTGATGGGACAAGTGACGAG ACGCATATACAAGTTATTTTTGAGAGTCTTCGTGAATGGATCAAGAAAGGTAGCAAGATTGTGATTGCAACACGCGCAGT GTCTCGTGATCTGGTTCCTGGGGATGATTCCATGATCCTTCATACTTATTTTGTACCGCTCTTGTGCTACCGAGATGGGT TAAAACACTTTAATCGCTATGCATTTGATCACCAAAACAAACACGACAGGGAAGCTTTCACGAAGGTGTCTAAAGAGGTT GTGCGTTACGCGAGAGGCCACCCACAAGTTCTCAAGATATTGGGTGAAGAGCTTCGTGGCAAACCCTTGCCTTACTGGAT AGAAAAACTAGATTCACTTCCGCAAAAGCTCAGCCCTAGTATTCGAGACCGTGTCTTGCAAGTAACTTATGATGAACTGA GTCAAGAGCAGAAGGATGCGTTTCTTGACATAGCTTTTTTCAGATCCCATGATTTGGTTTATGTAAAGAGCTTGCTGGAT TCATCTGGTCCTAAAGCGACAATGTCCACAATAGATGCTCTCAAGGACAAGTTCATGATTTATATCTCTGACAGCCGAGT GGAGATGCATGATCTTTTGTATACGTTTGCCATGGAAGTTGGTTCAGAAGCTTATGCTAAGGATGGAAGAGGAAGACACC GGATATGGCACCGTCAGAACAAAAATAACGGGGACATGCTCGATAAGCTACGTAAAAGAAAAGGAGGCGGCACCAGCGTC AGAAGTTTTTTTCTCGACTTGTATGACATGAAGAACCATGTGACCTTAGGAAGGGATCACCTCAAGAAGATGCGACATCT CAGGTATCTCAAGTTCTACAGTTCTCATTGTCCTCAGGAGTGTGAGCCTAAGGAAAACATACACATCCCTGATGAACTTG AGCTTCCACTGAAAGAGGTACGATGTTTGCATTGGCTAAATTTCCCAAAAGATGAACTTCCACAAGATTTCATCCCCGAG AATCTCGTAGACCTTAAGCTACCTTACAGCAAGATTAAACAGATCTGGAACGATGAGAAGGCTGTACCAAAGCTAAGGTG GGTCGATCTAAATCACTCAAGTCAGCTGGATAACTTGTCAGGGCTATCAAAGGCTCACAATCTTGAAAGGCTGAACCTTG AAGGCTGCACAGCACTGAAAACGTTACCTCTGGATATGCAAAACATGGAAAGTCTTGTTTTCCTGAACTTGAAAGGGTGC ACGTCGCTTGAATCCATTCCTGATATCAATTTGAAATCTCTGAAGATTCTCATCCTTAGCAACTGCTCAAGTCTGAAGAA GTTTGTGGTGATTTCAAAAACTCTCTATGCTCTATATTTGGATGGCAGTGCAATAAAGAAACTTCCTACAGACATGGTGA AGCTAGCAAGACTCGTTAAATTGAGCATGAAAGACTGCAAGAAGCTGGCAAAGCTTCCCGAAGGATTTGACAAGATGAAA GATCTTCAAGAACTAGTATGTTCTGGCTGTTCGAAGCTAAGTAGTCTCCCAGATGAGATGAAGAACATGAAATGCTTGCA GATTCTGATGCTTGATGGGACAGCAATAAAGGAGATTCCTAATATAAACTCACTTCAGCGTTTATGCCTAAGCGGAAATG ATACAATCATTTTACTTCCGGGTTACATCAGTCTGCTATCTCAGTTGAAATGGCTGGACTTGAAGCACTGTAAGAATCTT TTATCTATTCCAGAGCTTCCACCAAATCTTCAGTGCTTAGATGCACACGGATGCGAGTCGCTAAGAACAGTTGCAACTCC ACTGGCTACTCATTTGCCATCGGAGCAGATTCACTCCACATTCATTTTCACCGACTGCCACAAATTGGACCGAACTGCAA AGGAAGGAATCACAACCTACGCTCAACGAAAATGCCAGTTTCTATCAGATGCACTAAAACGCTGCAATGAGGGTTTTGTT CCAGAGGCTTTGTTCAGCATTTGCTTTCCAGGTTGTGAAGTGCCCTCATGGTTTTGCCATGAAGCAGTTGGATCTGAGTT AAACCTCAAACTTTCCCCACATTGGAATGAAAATAGGTTTGTCGGAATAGCTTTATGTGTAGTTATCTCCTTTCCAAACG GCCAAGAAGGAATCAACTCCTTTTCGGTTACATGCAAGTTTAAGCTGGAAAGTAAAGATGGGTCGCGGATCTCCTTCGAT CGCTTGGTTGGAAGTTGGAACAGACATGGCAAGAAGTCAGACAAGATGGCAAATGGCAAGAAACAAGACAAGAAGATGTC GTCAGAGCATGTCTTTATTTGCTATACAAGATGCTCAAATAACATCAAATGTCTTGAAGAGCAGTGCTCAGATGCATGTA CTCCAACTACAACTTCCCTTGAATTTGGTGTCACAGATGAGAAAGCTAGAGTCGAAGTGCTCAAATGCGGCTTAAGATTA GTGTATGCATCTGATGAACCCCAGAAGACAAACTCAGATGTTACTGACACAACTTGTGAAGAAATCGAGTGTCAAAATTT AACTCCAATAAGGAATGGCGATTACAATGTATAG |
| AA seq | Len:1158 aa MAASSTVRSVPKHQVFLNFRGELRYQFISHLAKALTDKNIQIFIDEDAEKGQPLSNLFKEIEKSRIALAVFSKLYTESNW CLDELERIKERTKAGELKTIPIFYNVDPKTVRYQTGEFGDALRKNEKRGVTDDKMENWKEALAYVSNLLGFEFDGKSNEN TFINKIVNEVLQALNKIPLEESTHGTCVEHAQNTRGEEQEEEEEAGQICGLKQRLEELEETVDIHGVETRIVQVVGMPGI GKTTLLKAFYNEWYSRFFRRVLLQNISGIVKQWGLERLPVMLLRELLGNDDIEDDGTYEEYKEKLCKEKVFIVLDGTSDE THIQVIFESLREWIKKGSKIVIATRAVSRDLVPGDDSMILHTYFVPLLCYRDGLKHFNRYAFDHQNKHDREAFTKVSKEV VRYARGHPQVLKILGEELRGKPLPYWIEKLDSLPQKLSPSIRDRVLQVTYDELSQEQKDAFLDIAFFRSHDLVYVKSLLD SSGPKATMSTIDALKDKFMIYISDSRVEMHDLLYTFAMEVGSEAYAKDGRGRHRIWHRQNKNNGDMLDKLRKRKGGGTSV RSFFLDLYDMKNHVTLGRDHLKKMRHLRYLKFYSSHCPQECEPKENIHIPDELELPLKEVRCLHWLNFPKDELPQDFIPE NLVDLKLPYSKIKQIWNDEKAVPKLRWVDLNHSSQLDNLSGLSKAHNLERLNLEGCTALKTLPLDMQNMESLVFLNLKGC TSLESIPDINLKSLKILILSNCSSLKKFVVISKTLYALYLDGSAIKKLPTDMVKLARLVKLSMKDCKKLAKLPEGFDKMK DLQELVCSGCSKLSSLPDEMKNMKCLQILMLDGTAIKEIPNINSLQRLCLSGNDTIILLPGYISLLSQLKWLDLKHCKNL LSIPELPPNLQCLDAHGCESLRTVATPLATHLPSEQIHSTFIFTDCHKLDRTAKEGITTYAQRKCQFLSDALKRCNEGFV PEALFSICFPGCEVPSWFCHEAVGSELNLKLSPHWNENRFVGIALCVVISFPNGQEGINSFSVTCKFKLESKDGSRISFD RLVGSWNRHGKKSDKMANGKKQDKKMSSEHVFICYTRCSNNIKCLEEQCSDACTPTTTSLEFGVTDEKARVEVLKCGLRL VYASDEPQKTNSDVTDTTCEEIECQNLTPIRNGDYNV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |