Names & Information
Knowledge of BnaC07G0449700ZS:
| Gene Name | BnaC07G0449700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g38210D [Brassica napus] |
| Best Hit (SwissProt) | -- |
| NT seq | Len:2712 nt ATGGATTCTCGAGGCGACAGTTCCAGGCTCGGACAGTATCCGACAATGTCTTCTAGGAACATGTCTTCATCTTCCTCAAC TGCTTTCTTCTCAGCTAACCAATCTCCTTCAAGATCTCCCAAAATCCACCAAGAACTATCCGAATCAACTCGGTCTGATG CTCATTGTGACAGCTTCGATCCTCTTACCTCCAGCTCTGGCTTTCAAGACCCTGAGCTCGAGTTGCAGCCTCCTCAATCT CAGAATCTTGAACCTGATCATAACGCTTACACACCTTCTAGGTATACTCAGACATCTTCTGCGTCAGTTTCTTACAACAG GGTGAGATGTTGCGACGTGTTCTTGGGGGTGCACGGTCAGAACCCTTCTCTCCTCCGTTTCGTGGACTGGCTCAGAGCCG AGTTGGAGCTTCAAGGGATGAGCTGCTTCATGTCGGACAGATCAAAATGCAGAAGCTCTCGGAAACAGAGGATAATCGAG AAAGCCATGGACGGCGCTTCCTTCGGTGTCATCATCTTAACGACAAAGTCCTTCAAGAGCCCTTACACGATCGAGGAGCT TCGGTTTTTCGCCAACAAGAAGAATCTAGTTCCCGTTTTCTTCGATCTCTCTCGAGAGGACTGTCTCGTGAGAGACATAG TCGAGAAGAGAGGAGACTTGTGGGAGAAGCACGGAGGCGAGCTGTGGGAGTGCTATGGAGGGATTGAGAAAGAGTGGAAA GAGGCGGTTAACGGGCTATCGCGCATGGACGACTGGAAGCTCGAAGCTCGGGAAGGTAACTGGAGAGACTGTGTGTTCAG AACGGTTGAGTTGTTGGCTACGAGGTTGGTTGGGAGGAGAAGCGTGGTCGAGGGGGTGGCGAAATGGCGAGATAAAGCGG AGAAAGAGGAGTTTCCGTATCCGCGGAACGAAAGCTTCGTTGGGAGGAAGAAGGAGCTGTCAGAGCTGGAGTTTGTTTTG TTTGGAGATGGAGAGGATTACTTCGAGTTACCAACGAAGAAAAGGAAGAACAAAGGGAAAGAGAAAGTTGCGTGGAAGGA GTGGGAGAAAGAGATTGAGTTAGTTAAGAAGACGAGGAAGAAGAAGAAGAAGAAGAGATCGATGAAAATCACCTGCGGGA AAGGCGTGGCGTGCGTCTCTGGAGAAGCAGGGATCGGCAAAACCGAGCTGCTTCTCGAGTTTGCATACAGGCATCACCAG AGGTACAAGATGGTTCTCTGGATAGGCGGCGAGAGCCGTTACATCAGGCAGAACTATCTGAATCTTTATCGGTACCTGGA CGTCGACGTCGGGGTGGAGAATTGCTCCGATAGAGCGCGGTTCAAGAGCTTCGAAGAGCGAGAGGATGCCGCGGTTTCGA GGATCAGGAGAGAGCTGATGAGGGACATACCCTTCTTGCTTGTTATCGATAACTTGGAGAGCGAGAAGGACTGGTGGGAC TCGAAGCTTGTGATGGATCTTCTCCCTAGGTTCGGAGGAGAGACGCATGTTTTGATATCTACGCGTCTCTCCAGAGTTAT GTACATGGAGCCGTTGAGACTCCCTTACCTCTCTGCCGCTGAAGCGATGGCATTGATGCAGGGGAACGTTAAGGAGTATC CGGTTCAGGAGATGGATGCGTTGAGAGTGATTGAAGAGAAGCTAGGGAGGTTAACGCTGGGACTAGGTATCGTCGGAGCT ATATTGTCAGAGCTTCCTATAAACCCGACCCGGCTTTTGGATACTATAAACAGAATGCCGTTGAGAGAGATGTCCTCGTG TAGTAGTGCCTTGAGAAGAAGGGTGTTTCTGTTGCAGCTGTTTGAAGTGTGTTTTTCGATCTTCGACCACGCGGATGGAC CGAGGGGTTTAGCTACTAGACTGGTTGTCGCGAGCGGGTGGTTAGCTCCGGGGCCTGTTCCAGCCTCTCTATTAGCTTTG GCTGCTTATAAACTCCCTGAGAAACATAGAGGATGTCTGTGGAGAAGACTGAGACGAGCTATAAGCTGTGGTTTTGCGTC TTCGAACTCCAAGAGATCAGGAGCTGAAGCTGCTTCTATGTTGCTTAGGTTCAACATCGCTAGAGCTAGTAACGTCAAGC TAGGGTTTGTACAGATACACGAGCTACTGAGACTCTACGCAAGAAATAGAGTGATGGTGAACGAGACTGCTCCCGCGATG GTTAGGGCTGTGATAAACAAAGGCTGGAGCGTTGAAACCGCGGATCAGATATGGGCGGTTTGTTTCCTGCTCTTCGGTTT CAGCAACGAGGCTCCGAGTATTCAGCTGAAGATAACAGAGCTGCTGTTTCTTGTGAAGCAAGTAATCTTGCCTCTAGCGA TTAGAACCTTCGTGACGTTTTCGCGGTGCGGTGCAGCCGTGGAGCTGCTCAGGGTCTGCACAAACGCGCTAGAAGCGGCT GACCAAACGCTGGTGAAGCCGGTGGAGAAGTGGCTAGACAAGTCGCTTTGCTGGAGATCTGTTCAGACAAGTGCACAGCT AAACCCTATTCTATGGGAAGAGCTTGCATTAGCTCGAGCCACCGTGCTGGAGACGCGAGCTAAGTTGACTCTACGTGGAG GGCAGTTTGGTGTGGCTGATGATCTTATCAGAAAAGCAATCTTCATCAGAACTTCTATCTCGGGTGAGGATCATCCTGGG ACTGTGTCGGCTAGAGAGACATTGAGCAAGTTAACGAGGCTTTCTTCTAATGTTCATAACAGTTCACCGTAA |
| AA seq | Len:904 aa MDSRGDSSRLGQYPTMSSRNMSSSSSTAFFSANQSPSRSPKIHQELSESTRSDAHCDSFDPLTSSSGFQDPELELQPPQS QNLEPDHNAYTPSRYTQTSSASVSYNRVRCCDVFLGVHGQNPSLLRFVDWLRAELELQGMSCFMSDRSKCRSSRKQRIIE KAMDGASFGVIILTTKSFKSPYTIEELRFFANKKNLVPVFFDLSREDCLVRDIVEKRGDLWEKHGGELWECYGGIEKEWK EAVNGLSRMDDWKLEAREGNWRDCVFRTVELLATRLVGRRSVVEGVAKWRDKAEKEEFPYPRNESFVGRKKELSELEFVL FGDGEDYFELPTKKRKNKGKEKVAWKEWEKEIELVKKTRKKKKKKRSMKITCGKGVACVSGEAGIGKTELLLEFAYRHHQ RYKMVLWIGGESRYIRQNYLNLYRYLDVDVGVENCSDRARFKSFEEREDAAVSRIRRELMRDIPFLLVIDNLESEKDWWD SKLVMDLLPRFGGETHVLISTRLSRVMYMEPLRLPYLSAAEAMALMQGNVKEYPVQEMDALRVIEEKLGRLTLGLGIVGA ILSELPINPTRLLDTINRMPLREMSSCSSALRRRVFLLQLFEVCFSIFDHADGPRGLATRLVVASGWLAPGPVPASLLAL AAYKLPEKHRGCLWRRLRRAISCGFASSNSKRSGAEAASMLLRFNIARASNVKLGFVQIHELLRLYARNRVMVNETAPAM VRAVINKGWSVETADQIWAVCFLLFGFSNEAPSIQLKITELLFLVKQVILPLAIRTFVTFSRCGAAVELLRVCTNALEAA DQTLVKPVEKWLDKSLCWRSVQTSAQLNPILWEELALARATVLETRAKLTLRGGQFGVADDLIRKAIFIRTSISGEDHPG TVSARETLSKLTRLSSNVHNSSP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | -- |