Names & Information
Knowledge of BnaC07G0453300ZS:
| Gene Name | BnaC07G0453300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:3021 nt ATGGAGTCTTCGTCTTCGTCTTCGTCTCCGTCTCGGAACTGGAGATTCAACGTCTTCCCGAGCTTCTGCGGTGAAGATCT TCGCAAAAGCTTTCTAAGTCATTTCCTCAAGGAGATGCAAAGGAAAGGAATCACCACTTTCATCGATCATGAGATCAAGA GGAGCAAAGCTATTGGCCCTGAGCTCGTGGCAGCGATCAGAGGATCAAGGATCGCAGTCATTTTGCTCTCGAAGAACTAT GCATCTTCGACGTGGTGTTTGAACGAATTGCTCGAAATCATGAGCTGTAAAGAAGAGCGGGGCCAAACAGTGATGCCTGT TTTCTACGACGTCGATCCATCTGACGTCAGAAAGCAGGCCGGCGATTTTGGAAACATCTTTGAAAAAACTTGCGTGGGGA AGTCGGAAGAAGTGAGGCAGAGATGGTCACGGGTTCTGACGGACGTCGCGAATCTAGCCGGAGTGGATTCTCGCCTCTGG AACAATGAAGCGGATATGATTGAGAAACTTGCGTTGGATATCTCTAGTGCATTAAACGTTACACCTTCAAGGGACTTTGA TGATCTAGTTGGAATAGACTCTCATATCGAAAATCTGAAGCCATTGTTATCTGTAGAGTCTAGTGAAGTGAGGATGGTAG GTGTTTGGGGTCCTGCGGGAATCGGGAAGACAACCATTGCAAGAGCTCTATACACTCGACTGTCTCCTACCTTCCGGCAT AGTGCATTCATGGAGAACATTAAAGAAACATATAGGAGAATCAACCTTGACGACTACGGTTCAAAGTTGCATATGCAAGA AGAGTGTTTGTCTAAGCTTATCAACCATAAAGACATTAAGATACCTCATTTAGGTGTGGTAAGAGAAAGGTTGAAGGACA AGAGAGTTCTTGTTGTTCTTGATGATGTAGATAAACTGGAGCAACTCATTGCCTTGGCAAAGGAGCCTCGATGGTTTGGT CCTGGAAGTAGGATTGTAGTGACCACACAAGATAGACAGCTTCTGAAAGCACATGGTATCGACCTTGTATACAAGGTGGA ACTTCCGTCTAGAACCGAAGCTCTTGAGATCTTCTGTCAATCTGCTTTTGGACAAAAGCATCCTCCTTGTGTCGGTATCA GGGAGCTCGCGCTACAAGTGACTCATCTTGCTGGCTATCTTCCTTTGGGTTTAACCGTTTTGGGCTCCTACTTGCGAGGG TTTTCTAAGGAAGAGTGGGAATATGCAATGCCAAGACTTTACACAAGTCTTGATGGAAAAATTGAGAAGACGTTGAGATT CAGCTATGATGCCTTGCATAGTAAAGATAAATCCATATTTCTTCACATTGCTTGTTTGTTCAATGGTAAGAACGTCGAGG ATGTGAAGACGTTGCTTGAGAATAGTAACTTGGACGTTGACCATGGACTTAAAGCCTTAGCTGATAAATCTCTCGTAGAT ACTCATTGGGGACGCATACATATGCATTCTCTGCTACAAAAATTGGGTAGAGAGATCGTCTGTCAACAGTCTGTTCACGA TCCTGGAAAACGTCAGTTCTTGGTTGATGCTGAGGAGATTCAGGATGTACTTGCCTGCAAATCCGGTACAGGAACGGTCT TAGGCATATCATTCGATGCATCGAAAATCAATGGAGAGTTATCCATAAGTAAGAAAGCCTTTAAAGGAATGCATAATCTT CAGTTCTTGGAGATATACAAGACATGGAATGCTAAATCCAGACTAAATCTGCCACAGGGTCTAAACTATTTACCCCACAA ACTTAAACTGCTACACTGGGACTCGTTTCCTATGAGATCTTTGCCTTCCAAGTTCTCTGCAGAGTTCCTTGTGGAACTCA GAATGACATGTAGCAAGCTTGAGAAACTCTGGGAAGGAATCATACCACTTAGGAGCCTCAGAGTGATGGATTTGAGTTTC TCCAGAAAGCTCAAAGAGATTCCTAATCTCTCAAATGCCACAAACCTTAAGAAATTTTCAGCAGATCTTTGTGAAAGCCT CAGTGCATTCCCACATGTCTCTGACTGCATCGAGGAGCTTGAACTAAGCTCCACGGGAATAGTAGAAGTTCCTCCATGGA TCGAGAATCTCTGTAGTCTGCATAAACTCTGTATGAAGCAATGCTCGAAACTGACCAATATCTGTATGAACATTTCAAAG CTCGAGAATCTTGAAGAAGTGAATTTTTCAGGCAGTGTAGACGGTCTCCCGTTTAATGCAATAGTTAGTTGGGTCTCTGG TGTCAAGAAAAGGCTGACGATAAGGGCTAATAATATTGAAGAAATGTTACCAAAATGTCTACCGAGAAAAGCATATACTT CTCCAGTTTCACTGGATTTGAGTGGTAACGAAGATATCAAAACTATTCCACAGCTTCCAGAATCGCTTTCAGAGCTAAAT GCACAAGAGTGTGAGTCTCTTGAGAGAATACATGGTTCGTTTCACAATCCAGACATCTGTCTCAATTTTGCAAACTGCTT GAAACTCAACAGAGAAGCAAGAGAGCTCATAAGTGCATCACCTAGCAGATACACAATCTTACCTGTTGAAGAACAGCCTG GAATGTTTAAAGACCAAACTTCAGGAGATTTATTGAAGGTTGTGCATATGATTCAAAGACCCTTTCCTGGATTCTTGATA TATAACTATAAGGCTTGCATTAGGTTTCTTGCTCGGTCAGCTGTCTATGACGATGACTCTGGTGGTATTGCTCGTGTAGA TTGTTGCATAAGGCGCAAATGCGATGGCAGTGTTGTGAGAGATGAATCTCTAGAGTTACACATTCCTGTACTCGTGAACG ATCATCTCTTTACATTGGGAGGTTCTTTGATCCTAAACGAAGGTAATGAACCTGAAGTAGATGCAACATTCAGCGAGCTT ATGTTCGAGTTCAAGGCCAACATTAAAATGGAGATTATAGGATGTCAATTTACAGTTCTTGGGGGCAAAAGGGACTATGA TACATATTATAGATGGAATGAAGAAGTTTCAAGGCTGCAAGATAAAAAGATAAAGCCATGA |
| AA seq | Len:1007 aa MESSSSSSSPSRNWRFNVFPSFCGEDLRKSFLSHFLKEMQRKGITTFIDHEIKRSKAIGPELVAAIRGSRIAVILLSKNY ASSTWCLNELLEIMSCKEERGQTVMPVFYDVDPSDVRKQAGDFGNIFEKTCVGKSEEVRQRWSRVLTDVANLAGVDSRLW NNEADMIEKLALDISSALNVTPSRDFDDLVGIDSHIENLKPLLSVESSEVRMVGVWGPAGIGKTTIARALYTRLSPTFRH SAFMENIKETYRRINLDDYGSKLHMQEECLSKLINHKDIKIPHLGVVRERLKDKRVLVVLDDVDKLEQLIALAKEPRWFG PGSRIVVTTQDRQLLKAHGIDLVYKVELPSRTEALEIFCQSAFGQKHPPCVGIRELALQVTHLAGYLPLGLTVLGSYLRG FSKEEWEYAMPRLYTSLDGKIEKTLRFSYDALHSKDKSIFLHIACLFNGKNVEDVKTLLENSNLDVDHGLKALADKSLVD THWGRIHMHSLLQKLGREIVCQQSVHDPGKRQFLVDAEEIQDVLACKSGTGTVLGISFDASKINGELSISKKAFKGMHNL QFLEIYKTWNAKSRLNLPQGLNYLPHKLKLLHWDSFPMRSLPSKFSAEFLVELRMTCSKLEKLWEGIIPLRSLRVMDLSF SRKLKEIPNLSNATNLKKFSADLCESLSAFPHVSDCIEELELSSTGIVEVPPWIENLCSLHKLCMKQCSKLTNICMNISK LENLEEVNFSGSVDGLPFNAIVSWVSGVKKRLTIRANNIEEMLPKCLPRKAYTSPVSLDLSGNEDIKTIPQLPESLSELN AQECESLERIHGSFHNPDICLNFANCLKLNREARELISASPSRYTILPVEEQPGMFKDQTSGDLLKVVHMIQRPFPGFLI YNYKACIRFLARSAVYDDDSGGIARVDCCIRRKCDGSVVRDESLELHIPVLVNDHLFTLGGSLILNEGNEPEVDATFSEL MFEFKANIKMEIIGCQFTVLGGKRDYDTYYRWNEEVSRLQDKKIKP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |