Names & Information
Knowledge of BnaC07G0474900ZS:
| Gene Name | BnaC07G0474900ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g40790D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1 |
| NT seq | Len:2589 nt ATGTTAGTCAAAGTTCGAAGCTGTTTGATGAGGGATGGAGTTCAAAAGATCGGTATTTGGGGTATGGGTGGAGTTGGGAA AACAACACTTGTAAGGGAACTGAACAATAAGCTGTGGAAAGAAGCTGATACGCAGCCTTTTGGTATGGTGATATGGGTTA CAGTTTCCAAAGAGTTTGAATTGGGTAGGGTCCAGAGGCAAATCGCTGAGAGATTGGATGTGGAAATCAGATTAGGCGAA AGCGAGGAAAGACTGGCTAGCCGGATATATGGAAGGCTTGAGCAAGTAAGTAGCTTTCTTCTCATTCTTGATGATGTCTG GAAACCCATTGATTTAGACCAGTTGGGGATTCCACACACAAATGAACACAAGTCTACAAAGATTGTCTTGACTTCTAGAT TTCTAGAGGTGTGCCAGAGCATCAAAACAGATATTGACTTCAGAGTGAATTACTTATGTGAAGAAGAAGCTTGGGAATTG TTCTGTAAAAATGCTGGAGAAGTAACTAGATTAGATCGTGTTAGACCCATAGCAAAAAAAGTTTCTCGGGAGTGTGGTGG ATTGCCTTTGGCTATCATCACGGTTGGAATGGCTATGCGGGGGAAGAAGAAGGTGGAGCTGTGGAAACATGCCCTTAAAG AACTCAAGAGTGCGGTGCCTTATGTCAAGAGTATTGAAGAAAAGATCTACCAGCCTCTGAAGTTGAGCTACGACAGGCTC CAGCCAAAGATGAAATCTTGCTTCCTCTTCTGTGCCTTATTTCCAGAGGATTACTCAATCGAAGTATCTGAGCTTGTGAG GTACTGGATTGCCGAAGGGTTCATTGATGAAACACAAAACTATAGCTACTTAATGAATCAAGGAATCACCTTGGTGGAGA ATCTGAAAGACTCTTGCTTACTTGAAGAGGGTGCTCACGGTGACACAGTTAAGATGCATGATGTGGTTCGCGATTTTGCC ATATGGGTCATGTCTTCCTCACGAGATGATAGTCACTCTCTTGTCATGTCCGGTATAGGCTTGTGTGAGTTTCCGCATGA GAAGTTCGTTCCTTCAATCCGAAGAGTTTCTTTGATGAACAATAAGCTTACTAGGCTCTCAAATCAGCTCCCAAATCAAG TGGTAAAGTGTGTTGAACTCTCAGCTTTGCTGCTACAAGGAAACTTTCACTTGAAGGAATTGCCTGAGGGGTTCTTGATA TCTTTTCCAGCACTTCGAATTTTGAATCTAAGTGGGACATGCATAAGGTCGTTGCCCAACTCCCTCAACAAGCTTCATGA GCTAAGATCTCTCATCTTGAGAGACTGCTACTACCTTGAAGAAGTTCCTTCCCTTTTAGGCCTTGCAAAAATTCAAATTC TGGATCTTTGTGCCACTCGAATAAGGGAAACTCCAAGAGGGTTGGAAACTTTGAACAGCTTGAGACTACTTGACCTCTCC CGAACGCATCACCTCGAAAGCATTCCAGCAGAAATCATCCCGAAGTTATCAAATTTAGAGGTTCTAGACATGACCCTTAG TCATTTCCACTGGGGCGTCCAAGGACAAACTCAAGAGGGGCAAGCAACACTTGAAGAGATTGCGCGCCTCCAACGTTTGT CGGTCCTCTCAATCAGAGTCGTATGTGTTCCACCTCTCTCCCCTGATTACAATTCCTGGATAGAAAGGTTAAAGAAATTC CAGTTGTTTATCGGTCCAACAGCAAACTCTTTACCTTCTAGACATGACAAGCGGAGAGTGACTATTAGTAGTCTCAATGT TTCAGAAGCATTCATTGGATGGTTGCTAGAGAATACAACTTCTCTAGTGATGAACCATTGCTGGGGTCTCAATGAGATGC TGGAGAACTTGGTAATCGATAGCACGAGTAGCTTCAACATGTTAAGATCTCTAACGGTAGAGGGTTTTGGTGGAAGTATA AGACCCGCTGGTGGATGTGTCGCACAGCTGGATCTTCTACCTAACCTTGAAGAGCTTCATCTGCGTCGTGTAAATCTGGG AACCATTAGAGAGCTCGTTGGTCACCTGGGGTTGAGATTTGAGACACTGAAACATCTAGAAATCAGCAGATGTAGCCAGC TCAAATGCCTTCTTTCATTTGGGAACTTCATCTGTTTCCTGCCGAACCTACAAGAGATACATGTTAGTTTCTGTGAAAGG CTTCAGGAGCTGTTTGACTATTTTCCAGGAGAAGTTCCAACCTCTGCTTCTGTGGTACCTGCTCTGCGTGTCATAAAGCT AAGAAATCTTCCGCGGTTGAGGAGATTATGTAGCCAAGAAGAGTCATGGGGATGTCTGGAACATGTGGAAGTGATAAGTT GCAATCTTCTGAGGAATCTACCCATAAGTGCAAATGACGCTCATGGAGTCAAAGAAGTAAGAGGAGAAACACACTGGTGG AACAACTTAACTTGGGATGATAACACTACAAGAGAAACTCTTCAGCCTCGTTTCATAGCAGCTGGGAATATACCTACTGG CTCTCTTGGAATGTCTTGCTATCAGAGCTCCAACACAATTGAAGAAGCTTCTCCAATTTCTACTTTACCAGAATCTCAGG CCGAAGAGCTTCCTGTAGCTACGATGTAA |
| AA seq | Len:863 aa MLVKVRSCLMRDGVQKIGIWGMGGVGKTTLVRELNNKLWKEADTQPFGMVIWVTVSKEFELGRVQRQIAERLDVEIRLGE SEERLASRIYGRLEQVSSFLLILDDVWKPIDLDQLGIPHTNEHKSTKIVLTSRFLEVCQSIKTDIDFRVNYLCEEEAWEL FCKNAGEVTRLDRVRPIAKKVSRECGGLPLAIITVGMAMRGKKKVELWKHALKELKSAVPYVKSIEEKIYQPLKLSYDRL QPKMKSCFLFCALFPEDYSIEVSELVRYWIAEGFIDETQNYSYLMNQGITLVENLKDSCLLEEGAHGDTVKMHDVVRDFA IWVMSSSRDDSHSLVMSGIGLCEFPHEKFVPSIRRVSLMNNKLTRLSNQLPNQVVKCVELSALLLQGNFHLKELPEGFLI SFPALRILNLSGTCIRSLPNSLNKLHELRSLILRDCYYLEEVPSLLGLAKIQILDLCATRIRETPRGLETLNSLRLLDLS RTHHLESIPAEIIPKLSNLEVLDMTLSHFHWGVQGQTQEGQATLEEIARLQRLSVLSIRVVCVPPLSPDYNSWIERLKKF QLFIGPTANSLPSRHDKRRVTISSLNVSEAFIGWLLENTTSLVMNHCWGLNEMLENLVIDSTSSFNMLRSLTVEGFGGSI RPAGGCVAQLDLLPNLEELHLRRVNLGTIRELVGHLGLRFETLKHLEISRCSQLKCLLSFGNFICFLPNLQEIHVSFCER LQELFDYFPGEVPTSASVVPALRVIKLRNLPRLRRLCSQEESWGCLEHVEVISCNLLRNLPISANDAHGVKEVRGETHWW NNLTWDDNTTRETLQPRFIAAGNIPTGSLGMSCYQSSNTIEEASPISTLPESQAEELPVATM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine rich repeat |
| KEGG | disease resistance protein At4g27190-like; K13459 disease resistance protein RPS2 (A) |