Names & Information
Knowledge of BnaC07G0500900ZY:
| Gene Name | BnaC07G0500900ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g46000D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:3930 nt ATGGATTCTTCTTTTAGGATCTGTGCTGCTACGATTATTCTGGGTACCCTATTGTTTATTGTTTACAGAAAACTCAGATC CAATCCACAAATCGAAACAGTGGCTTCATCTCCCAATTTCTCGACTCCATCAAGCGATTTGGAAGCAGTGTCTAATGGAT CACCACTACAGCACGCCGTCTACATCTACTGCGCAGAGACGTTACGGAACACCTTCGCCAGCCACCTCTCCGTGGATTTC CGCCGCAAACGCATTGCTGCATTTGTGAACTGCGATGATGATGATGTGACAGAGGGAGCTTCTGTGGTTTTTGTTTTTTC CAAGAACGACTCGTGCTTTGACAAGCTCGTGACGGTTCTTCAGTGCCGGAGGAAAACAGGCCACCTGGTGGTTCCGGTGT TCTATGGTGTAAGTCCATCAGAGGTAGTGGTGCCGGAGCACGATTCTGGTGATCGGATAAGAGAATGGAGTCGCGCTCTC CGCGAACTGAGAGAATTACCAAGCCACCAGTCTAGTGAGGAGTGTGGTGAGTGCCAAGTCGTGGAAGACATTGTCAACGC TGTGTATGAAAAACTATTTCCCACGGAACAGATTGGAACCAACTCGAGGCTGGTGGAGATAGAACGGTTGCTTTGTAAGC AACCTTGGGGTATCCGCCGCTTAGGGATCTGGGGTATGCCCGGCATAGGCAAGACCACTCTCGCTAAAGCAGTTTTTCAC CAGATATCTGGAGGCTATGAAGCTTCTTGTTTCATCAAACACTTTGACAGAGCTTTCCATGAGAAGGGACTTCACTGTCT GTTGGAGGAGCATTTTGGGAAAATCCTCAAGGAACTTCCTCGTGTATGCAGTAGCATTACGAGGCCTAGTCTCCCTGGGG ACAAGATAAGCAAGAAGAGAACTCTTGTTGTTCTTGATGACGTGCAAGATCCTTTAGGTGCCCAGTCTTTTCTCGGAAGG TTTCATTGGTTTGGCCCGGGCAGCCTAATCATCATAACCTCCAGAGATAAACAAGTGTTCCGCCTTTGTCAGATGAATCA CGTGTACGAGGTTCAGGGATTGAGTGAGAACGAGGCTCTTCAGCTTTTCTCTCAGTGTGCATTTGGGAAAAGTATAAGAG AACAAAATCTTCTGGAGCTGTCAATGGAAGTGATTGACTATGCTAATGGAAATCCGTTTGCTCTAAGCTTTTACGGCAGA GAGCTCAAGGGTAAGAAAGTATCAGAAATGGAGACGACTTTCCTCAAACTCAAGCTTCCTACTCCATATAAGATTCATGA TTTATTCAACAGCAGCTACAAAACTCTCAATGACAACGAGAAGAACATTTTTCTGGACATTGCTTGTTTCTTCGTGGGAG AAGATGTTGACTATGTGATGCCACTTCTTGAGGGATGTGGTTTCTTTCCACATGTTGGGATTGATATTCTTGTGGAGAAA TGTCTTGTAACTATTTCAGAAAAGAGAGTGCTAATGCATAGAATAATCCAAGACTTTGGCAGAGAAATAATCAACGGAGA ATCAGAACAGATGGAGAGGCGTAGCAGACTGTGGGAACCTTGGACCATAAAATTTCTACTTGAAGCAAATGGACATCCCA GAGCAACCTGTAAACGTGTTTTGGGCACTGAAGACATCGAAGGCATCTTTCTGGACACATCGAACTTACTCTTTGATGTG AAGCACACTGCTTTCGATAATATGCTTAACCTTAGATTCCTGAAGATTTACTGTTCCAGTCACGAAAATCAACATAGACT CGGCCTTCCGAGAGGACTTGAGTCTCTGCCTTATGAGCTAAGACTTCTCCACTGGGAGAACTATCCTTTGGAATACTTGC CACAAGACTATGAACCATGCCACCTAGTTGAACTCAATATGTCTTACAGTCATCTTCAGAAACTTTGGGGAGGAACCAAG AACCTCGAGATGTTGAAGGTTTGTAGGCTTTGTCATTCCCAACAGCTGACTGAGATTGACGATCTTTGTAAAGCTCGAAA TATCGAGATAATTGATCTCCAAGGTTGTACAAAATTGCATAGATTTCCACCCACGGGTCAATTACAGCATCTCCGAGTTG TAGATCTTTCAGGTTGCACAGAGATCAGAAGTTTCCCAGATGTTTCACCTAACATTGAGGAACTACATCTACAGGGAACT GGCATAAGAGAATTACCAATATCCCTTGTGGCCCATGTCGTCTCATCAAATCAGAATCTTGACAAACTTGTTTTGCTAAA TATGAAAGATTGTTCTAATTTGCAAAGTCTGCCTCAACTGGTTGATTTAGAATCGCTTGAAGTTCTTGATCTCTCTGGAT GCTCGGAGCTCAAGAGTATACAGGGATTCCCACGAAACCTGAAAAGGTTATATATTGTTGGCACTGCTGTTAAAGAACTT CCACCGCTTCCCTGGAGTATAGAACTCTTGAATGCACATGGTTGTGTGTCTCTTATATCAATTCCTTTTGGATTTGAGAA ACTTCCTAGGTATTACACATTCAGTAACTGCGTTGCTCTTTCTGCACAAGTGGTCAGCGAATTTGTAGTTAATTCTCTGA CTAATGTAGAGCGCATGGCGAGAGAGTATCAGCCGGAACTCAACAAATCTCTGGCTTTCAGCCTCACCGTGCCTTCGGCT TCAAGTAAACAGTTCACATGTGATCTGCAACCAGGGTCTTCTGTGATGATACAACTGGGTTCTTGGCGCAGCACGCTCGG CTTTGCTATTATAGTCGAACTTTCATTTTCGGAAGATTACCACGAGGCTAGTGATTTTGGCATTAGTTGTGTCTGCAGAT GGAAAGACAAGGGATTCATCTCTCATAGGCTGGAAAAAAGCTTTCCTATTTGGACTCCAGGGGAAGGTGTTCCAAGAGAT CACGTGTTTGTCTTCTGTGATCTCAATATGCATCCGAGTAACTGTGAAGGAAATGATCCCTATATATTGGCTGATCTTGT GGTATTTGAATTCTTTGCGGTGAACAAGGAGAAAAAGCCTCTAAATGAGAGTTGTACAGTGACGAAATGTGGAGTCCGTG TGATTACTGATGCAAATGGAGGTGCAAGTTGTAACATGAGTCAACCATTTCCATCCTTGGGTTACCTGCAAGAGAGTTTT GATAGTGAGATGGAAGAAGTATTGAGGGTCATCTTTGATATCTTAGACAAGAATGATAGAAATTTGGTTCTTTACATTGC ATGTCTGTTCAATGACGAGAAAGCTGATTTCCTGACACCGATTATAGCTAGCATTGACCTGGGGATTAGTTCTAGGCTCG AGTTCTTAGCCAATCAGTCTCTCATACATATATCTCCATATGGTATTGTAGTGCGACATGGTTTACTTGAGAAAATAGGT AGGGAGATTGTAGTGCTCTCAAAGAACTATGCGTCTTCGAGTAGGTGCTTGGATGAGCTGGTAGAGATTATGAATTGCAA TAGAGAGTTTCAGAAAGTAGTGACTATTTTCGACAATGTGGTTCCTTCTGACGTTGGAAGGTTGGCCGACTTAGCAAACA TAGACGGAGTGAATTCTCGCAAGTGGGATAATGAAGCAAAGATGTTGGATAAAACTGGATGTGACGTTCTGGAGGAGATA AATCATACAACGTCAGATGATTCTGGCGATGTGATTGGAGTTCAAGATCATGTTACAGACATGGGTTATTGGTCGGGTTC GGAATCTGAGGAAGTGAAGAAAACAGTTGGGATCTCAATTTCCTTGGAAAAAGCAGGGGAAAAGATAAATGCAAGTATGG TTGCAATGCCGGTGGAGCCACCAATGATAAGATCCGAAGCACGGAGTCCTACTTTTCGAGATCGAATCCCCTTTGCTGAG CTTTATACTGGAGAAATCCCAGCTGCATTTTTACAAGGGCTGCACAATATCCGCTCTGTGCTCCAATCTCAAAAGTCCAT ACGACTATAA |
| AA seq | Len:1310 aa MDSSFRICAATIILGTLLFIVYRKLRSNPQIETVASSPNFSTPSSDLEAVSNGSPLQHAVYIYCAETLRNTFASHLSVDF RRKRIAAFVNCDDDDVTEGASVVFVFSKNDSCFDKLVTVLQCRRKTGHLVVPVFYGVSPSEVVVPEHDSGDRIREWSRAL RELRELPSHQSSEECGECQVVEDIVNAVYEKLFPTEQIGTNSRLVEIERLLCKQPWGIRRLGIWGMPGIGKTTLAKAVFH QISGGYEASCFIKHFDRAFHEKGLHCLLEEHFGKILKELPRVCSSITRPSLPGDKISKKRTLVVLDDVQDPLGAQSFLGR FHWFGPGSLIIITSRDKQVFRLCQMNHVYEVQGLSENEALQLFSQCAFGKSIREQNLLELSMEVIDYANGNPFALSFYGR ELKGKKVSEMETTFLKLKLPTPYKIHDLFNSSYKTLNDNEKNIFLDIACFFVGEDVDYVMPLLEGCGFFPHVGIDILVEK CLVTISEKRVLMHRIIQDFGREIINGESEQMERRSRLWEPWTIKFLLEANGHPRATCKRVLGTEDIEGIFLDTSNLLFDV KHTAFDNMLNLRFLKIYCSSHENQHRLGLPRGLESLPYELRLLHWENYPLEYLPQDYEPCHLVELNMSYSHLQKLWGGTK NLEMLKVCRLCHSQQLTEIDDLCKARNIEIIDLQGCTKLHRFPPTGQLQHLRVVDLSGCTEIRSFPDVSPNIEELHLQGT GIRELPISLVAHVVSSNQNLDKLVLLNMKDCSNLQSLPQLVDLESLEVLDLSGCSELKSIQGFPRNLKRLYIVGTAVKEL PPLPWSIELLNAHGCVSLISIPFGFEKLPRYYTFSNCVALSAQVVSEFVVNSLTNVERMAREYQPELNKSLAFSLTVPSA SSKQFTCDLQPGSSVMIQLGSWRSTLGFAIIVELSFSEDYHEASDFGISCVCRWKDKGFISHRLEKSFPIWTPGEGVPRD HVFVFCDLNMHPSNCEGNDPYILADLVVFEFFAVNKEKKPLNESCTVTKCGVRVITDANGGASCNMSQPFPSLGYLQESF DSEMEEVLRVIFDILDKNDRNLVLYIACLFNDEKADFLTPIIASIDLGISSRLEFLANQSLIHISPYGIVVRHGLLEKIG REIVVLSKNYASSSRCLDELVEIMNCNREFQKVVTIFDNVVPSDVGRLADLANIDGVNSRKWDNEAKMLDKTGCDVLEEI NHTTSDDSGDVIGVQDHVTDMGYWSGSESEEVKKTVGISISLEKAGEKINASMVAMPVEPPMIRSEARSPTFRDRIPFAE LYTGEIPAAFLQGLHNIRSVLQSQKSIRL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |