Names & Information
Knowledge of BnaC07G0513500GG:
| Gene Name | BnaC07G0513500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g46000D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:3912 nt ATGGATTCTTCTTTTAGGATCTGTGCTGCTACGATTATTCTGGGTACGCTATTGTTTATTGTTTACAGAAAACTCAGATC CAATCCACAAATCGAAACAGTGGCTTCATCTCCCAATTTCTCGACTCCATCAAGCGATTTGGAAGCAGTGTCTAATGGAT CACCACTACAGCACGCCGTCTACATCTACTGCGCAGAGACGTTACGGAACACCTTCGCCAGCCACCTCTCCGTGGATTTC CGCCGCAAACGCATTGCTGCATTTGTGAACTGCGATGATGATGTGACAGAGGGCGCTTCTGTGGTTTTTGTTTTTTCCAA GAACGACTCGTGCTTTGACAAGCTCGTGACGGTTCTTCAGTGCCACCTGGTGGTTCCGGTGTTCTATGGTGTAAGTCCAT CAGAGGTAGTGGTGCCGGAGCACGATTCTGGTGATCGGATAAGAGAATGGAGTCGCGCTCTCCGCGAACTGAGAGAATTA CCAAGCCACCAGTCTAGTGAGGAGTGTGGTGAGTGCCAATTCGTGGAAGACATTGTCAACGCTGTGTATGAAAGACTATT TCCCACGGAACAGATTGGAACCAACTCGAGGCTGGTGGAGATAGAACGGTTGCTTTGCAAGCAACCTTGGGGTATCCGCC GCTTAGGGATCTGGGGTACGCCCGGCATAGGTAAGACGACTCTCGCTCAAGCAGTTTTTCACCAGATATCTGGAGGCTAT GAAGCTTCTTGTTTCATCAAACACTTTGACAAAGCTTTCCATGAGAAGGGACTTCACTGTCTGTTGGAGGAGCATTTTGG GAAAATCCTCAAGGAACTGCCTCGTGTATGCAGTAGCATTACGAGGCCTAGTCTCCCTGGGGACAAGATAAGCAAGAAGA GAACTCTTGTTGTTCTTGATGACGTGCAAGATCCTTTAGGTGCCCAGTCTTTTCTCGGAAGGTTTCATTGGTTTGGCCCG GGCAGCCTAATCATCATAACCTCCAGAGATAAACAAGTGTTCCGCCTTTGTCAGATGAATCACGTGTACGAGGTTCAGGG ATTGAGTGAGAACGAGGCTCTTCAGCTTTTCTCTCAGTGTGCATTTGGGAAAAGTATAAGAGAACAAAATCTTCTGGAGC TGTCAATGGAAGTGATTGACTATGCTAATGGAAATCCGTTTGCTCTAAGCTTTTACGGCAGAGAGCTCAAGGGTAAGAAA GTATCAGAAATGGAGACGACTTTCCTCAAACTCAAGCTTCCTACTCCATATAAGATTCATGATTTATTCAACAGCAGCTA CAAAACTCTCAATGACAACGAGAAGAACATTTTTCTGGACATTGCTTGTTTCTTCGTGGGAGAAGATGTTGACTATGTGA TGCCACTTCTTGAGGGATGTGGTTTCTTTCCACATGTTGGGATTGATATTCTTGTGGAGAAATGTCTTGTAACTATTTCA GAAAAGAGAGTGCTAATGCATAGAATAATCCAAGACTTTGGCAGAGAAATAATCAACGGAGAATCAGAACAGATGGAGAG GCGTAGCAGACTGTGGGAACCTTGGACCATAAAATTTCTACTTGAAGCAAATGGACATCCCAGAGCAACCTGTAAACGTG TTTTGGGCACTGAAGACATCGAAGGCATCTTTCTGGACACATCGAACTTACTCTTTGATGTGAAGCACACTGCTTTCGAT AATATGCTTAACCTTAGATTCCTGAAGATTTACTGTTCCAGTCACGAAAATCAACATAGACTCGGCCTTCCGAGAGGACT TGAGTCTCTGCCTTATGAGCTAAGACTTCTCCACTGGGAGAACTATCCTTTGGAATACTTGCCACAAGACTATGAACCAT GCCACCTAGTTGAACTCAATATGTCTTACAGTCATCTTCAGAAACTTTGGGGAGGAACCAAGAACCTCGAGATGTTGAAG GTTTGTAGGCTTTGTCATTCCCAACAGCTGACTGAGATTGACGATCTTTGTAAAGCTCGAAATATCGAGATAATTGATCT CCAAGGTTGTACAAAATTGCATAGATTTCCACCCACGGGTCAATTACAGCATCTCCGAGTTGTAGATCTTTCAGGTTGCA CAGAGATCAGAAGTTTCCCAGATGTTTCACCTAACATTGAGGAACTACATCTACAGGGAACTGGCATAAGAGAATTACCA ATATCCCTTGTGGCCCATGTCGTCTCATCAAATCAGAATCTTGACAAACTTGTTTTGCTAAATATGAAAGATTGTTCTAA TTTGCAAAGTCTGCCTCAACTGGTTGATTTAGAATCGCTTGAAGTTCTTGATCTCTCTGGATGCTCGGAGCTCAAGAGTA TACAGGGATTCCCACGAAACCTGAAAAGATTATATATTGTTGGCACTGCTGTTAAAGAACTTCCACCGCTTCCCTGGAGT ATAGAACTCTTGAATGCACATGGTTGTGTGTCTCTTATATCAATTCCTTTTGGATTTGAGAAACTTCCTAGGTATTACAC ATTCAGTAACTGCGTTGCTCTTTCTGCACAAGTGGTCAGCGAATTTGTAGTTAATTCTCTGACTAATGTAGAGCGCATGG CGAGAGAGTATCAGCCGGAACTCAACAAATCTCTGGCTTTCAGCCTCACCGTGCCTTCGGCTTCAAGTAAACAGTTCACA TGTGATCTGCAACCAGGGTCTTCTGTGATGATACAACTGGGTTCTTGGCGCAGCACGCTCGGCTTTGCTATTATAGTCGA ACTTTCATTTTCGGAAGATTACCACGAGGCTAGTGATTTTGGCATTAGTTGTGTCTGCAGATGGAAAGACAAGGGATTCA TCTCTCATAGGCTGGAAAAAAGCTTTCCTATTTGGACTCCAGGGGAAGGTGTTCCAAGAGATCACGTGTTTGTCTTCTGT GATCTCAATATGCATCCGAGTAACTGTGAAGGAAATGATCCCTATATATTGGCTGATCTTGTGGTATTTGAATTCTTTGC GGTGAACAAGGAGAAAAAGCCTCTAAATGAGAGTTGTACAGTGACGAAATGTGGAGTCCGTGTGATTACTGATGCAAATG GAGGTGCAAGTTGTAACATGAGTCAACCATTTCCATCCTTGGGTTACCTGCAAGAGAGTTTTGATAGTGAGATGGAAGAA GTATTGAGGGTCATCTTTGATATCTTAGACAAGAATGATAGAAATTTGGTTCTTTACATTGCATGTCTGTTCAATGACGA GAAAGCTGATTTCCTGACACCGATTATAGCTAGCATTGACCTGGGGATTAGTTCTAGGCTCGAGTTCTTAGCCAATCAGT CTCTCATACATATATCTCCATATGGTATTGTAGTGCGACATGGTTTACTTGAGAAAATAGGTAGGGAGATTGTAGTGCTC TCAAAGAACTATGCGTCTTCGAGTAGGTGCTTGGATGAGCTGGTAGAGATTATGAATTGCAATAGAGAGTTTCAGAAAGT AGTGACTATTTTCGACAATGTGGTTCCTTCTGACGTTGGAAGGTTGGCCGACTTAGCAAACATAGACGGAGTGAATTCTC GCAAGTGGGATAATGAAGCAAAGATGTTGGATAAAACTGGATGTGACGTTCTGGAGGAGATAAATCATACAACGTCAGAT GATTCTGGCGATGTGATTGGAGTTCAAGATCATGTTACAGACATGGGTTATTGGTCGGGTTCGGAATCTGAGGAAGTGAA GAAAACAGTTGGGATCTCAATTTCCTTGGAAAAAGCAGGGGAAAAGATAAATGCAAGTATGGTTGCAATGCCGGTGGAGC CACCAATGATAAGATCCGAAGCACGGAGTCCTACTTTTCGAGATCGAATCCCCTTTGCTGAGCTTTATACTGGAGAAATC CCAGCTGCATTTTTACAAGGGCTGCACAATATCCGCTCTGTGCTCCAATCTCAAAAGTCCATACGACTATAA |
| AA seq | Len:1304 aa MDSSFRICAATIILGTLLFIVYRKLRSNPQIETVASSPNFSTPSSDLEAVSNGSPLQHAVYIYCAETLRNTFASHLSVDF RRKRIAAFVNCDDDVTEGASVVFVFSKNDSCFDKLVTVLQCHLVVPVFYGVSPSEVVVPEHDSGDRIREWSRALRELREL PSHQSSEECGECQFVEDIVNAVYERLFPTEQIGTNSRLVEIERLLCKQPWGIRRLGIWGTPGIGKTTLAQAVFHQISGGY EASCFIKHFDKAFHEKGLHCLLEEHFGKILKELPRVCSSITRPSLPGDKISKKRTLVVLDDVQDPLGAQSFLGRFHWFGP GSLIIITSRDKQVFRLCQMNHVYEVQGLSENEALQLFSQCAFGKSIREQNLLELSMEVIDYANGNPFALSFYGRELKGKK VSEMETTFLKLKLPTPYKIHDLFNSSYKTLNDNEKNIFLDIACFFVGEDVDYVMPLLEGCGFFPHVGIDILVEKCLVTIS EKRVLMHRIIQDFGREIINGESEQMERRSRLWEPWTIKFLLEANGHPRATCKRVLGTEDIEGIFLDTSNLLFDVKHTAFD NMLNLRFLKIYCSSHENQHRLGLPRGLESLPYELRLLHWENYPLEYLPQDYEPCHLVELNMSYSHLQKLWGGTKNLEMLK VCRLCHSQQLTEIDDLCKARNIEIIDLQGCTKLHRFPPTGQLQHLRVVDLSGCTEIRSFPDVSPNIEELHLQGTGIRELP ISLVAHVVSSNQNLDKLVLLNMKDCSNLQSLPQLVDLESLEVLDLSGCSELKSIQGFPRNLKRLYIVGTAVKELPPLPWS IELLNAHGCVSLISIPFGFEKLPRYYTFSNCVALSAQVVSEFVVNSLTNVERMAREYQPELNKSLAFSLTVPSASSKQFT CDLQPGSSVMIQLGSWRSTLGFAIIVELSFSEDYHEASDFGISCVCRWKDKGFISHRLEKSFPIWTPGEGVPRDHVFVFC DLNMHPSNCEGNDPYILADLVVFEFFAVNKEKKPLNESCTVTKCGVRVITDANGGASCNMSQPFPSLGYLQESFDSEMEE VLRVIFDILDKNDRNLVLYIACLFNDEKADFLTPIIASIDLGISSRLEFLANQSLIHISPYGIVVRHGLLEKIGREIVVL SKNYASSSRCLDELVEIMNCNREFQKVVTIFDNVVPSDVGRLADLANIDGVNSRKWDNEAKMLDKTGCDVLEEINHTTSD DSGDVIGVQDHVTDMGYWSGSESEEVKKTVGISISLEKAGEKINASMVAMPVEPPMIRSEARSPTFRDRIPFAELYTGEI PAAFLQGLHNIRSVLQSQKSIRL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |