Names & Information
Knowledge of BnaC07G0513600GG:
| Gene Name | BnaC07G0513600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC07g46010D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:2895 nt ATGGTGGCTTCCTCCTCCGTACAATCACCGCCGCAGCATCAAGTCTTCATAAATTTCCGAGGGAAACATCTGCGGAACGG TTTCGTCAGCCACCTGGAGAAGGCCTTGAGAAAAGATGGAATCAACGTCTTTATCGACAGAGACGAAACTAAAGGTAAAG ATCTCAGCATCCTCTTTTCCAGAATCGAAGAGTCGAGAATCGCGCTGGCTATCTTCTCAGCGCTCTACACGGAGTCCAAC TGGTGCTTAAACGAGCTTGAGAAGATCAAGGAGTGCGTTGATTTGGGGAAGCTAGTGGTCATCCCCATCTTCTACAAGGT GGAGACAGACGATGTGAAGAATCTCAAGGGCGTGTTTGGTGACAAGTTTTGGGAGTTGGCTAAGACTTGTAAAGGTGAAA AGCTTGATAAGTGGAGAGAAGCTTTAGAGGATGTCCCCAAAAAGCTAGGCTTCACTTTAAGCGAAGCGAGCGATGAAGGT GAATACATCAATAAAATTGTAGGGGAAGTGATCAAAGTGCTCTCTCATGTTTCGACGGGTCTTGAAGGACAAGTCCCCAT TGAGTATCCTTCTGCTGCAGGACAAGGAGGAGAAGCTGCTGCTCTTGACTCGCCTCCTCTGTTTGGCATTGAAACACGTC TTAGGCAATTGGAAGACAAGTTAGATTTCCAGTGCGAGAACACTCTTACGATCGGTGTTGTCGGGATGCCTGGTATTGGT AAGACTACCTTGACGAGGATGCTCTATGAAAAGTGGCAACACAAGTTCCTGCGCTGTGTTTTTCTTCATGACGTCCGTAA AATGTGGAAAGACTGCATGCTGAATCGGAACATTCTCATGGCAGAGTTGTTGAGGGATGATGATAACGTGAACCAACAAG TCGCTGACCTGTCGCCTGAATCCCTCAAGGCACTCTTACTCAGTAAGAAATCTCTTGTTGTTCTTGATAACGTAAGTGAC AAGAAACAGATTGAGGTTCTTCTTGGCGAATGCGACTGGATCAAGAAAGGTAGCTTAATTTTCATCACAACGAGTGACAG GTCGGTGATCGAAGGGAAAGTTGATGACACATATGAGGTTCTGAGGTTGAGTGGCAGTGACAGCTTTCAGTACTTCACCT ATTTTGCCTTTGGTGGAAACCACTCTACTACTCCCCGGGGAAACTTCATGAACCTTTCTAGATTGTTTGCGGATTATGCC AAAGGCAACCCGTTAGCTCTCAAGATATTGGGTGCTGAGCTTAATGAAAAAGATGAGACTCACTGGGAAGATAAACTTTG CAAGCTGGCAGAAAATCCCAACAAGACTATACAAAATGTCTTGCAGATAAGCTACAATGAACTGGGTCAGCTTCAAAAAG ATGTCTTTCTCGATGTCGCTTGTTTCTTTAGATCAGGGGATGAGTATTACGTGAGGTGTTTAGTAGATTCTTGTGCCACT GATGCTTTGAGGGATCTTGCCAGTAAATTTTTTATAAACATTTCTGGCGGCCGAGTGGAGATGCATGATTTACTGTATAC ATTTGGCAAGGAACTTGGTGCACAAGGGTCGCGTAGGCTGTGGAACCATAAAGGCGTTGTTGGTGCACTGAAGAAAAGAT CAGGAGCGGAGAGTGTGCGAGGTATTTTTCTAGACATGTCTGAACTGAAGAAAAAACTTCCTTTGGAAAAATGTACCTTC AGCGGGATGCATAACCTTAGGTACCTCAAATTCTACAACTCTTGTTGCTACCGGGAATGCGAAGCTGACTGCAAGCTAAA CTTCCCTGAGGGACTTGAGTTTACGTTGGATGAAGTACGGTATCTCTATTGGCTGAAATTCCCTTTGAAGAAACTTCCAA AAGACTTCAACCCCAAGAATCTTACCGACCTTAACCTGCCTTACAGCGAGATTGACGAGGTCTGGGAAGGTGTTAAGGAT ACACCCAAGTTAAGGTGGATTGATCTTAGCCACTCAATCAAGTTAAGCAAGTTGTCGGGGTTGCGAAATGCTGAAAATCT CCAAAGACTGAGTCTTGAAGGCTGCACAAGTTTGCAGGAGTTGCCCCAGGAGATGAAACGTATGAAACGTCTTGCTTTCC TCAACATGAGAGGATGCACGAGTCTCCGGTTTCTTCCACATATGAATCTCATCTCTCTGAAAACTCTCACCCTCACCAAC TGCTCAAGTCTTGAGGAATTCCGGGTAATTTCGGATTATCTGGAAACTCTCTACTTAGATGGAACCGCCATAACTCAACT TCCTACTAATATGGTGAAGCTCCAGAGACTGATTGTATTGAACTTGAAAGACTGCAAAATGTTGGCGGATGTTCCAGAAT GCCTGGGGAAGCTGAAAGCGCTGCAAAAACTGGTGCTATCTGGCTGTTCAAAGCTCAAAACATTTCCAACTTCCATTGAA AACATGAAATGCTTGCAGATCTTATTGCTCGATAGGACAGCAATTACAGACATGCCGAAGATATTACATTCATCATATAG CTCAAAAATGGAAGATCTGCGCGAGTTAAGAGTTGGTATGAACGGCCTATCCTCCTCATTGCGTCGTCTATGCTTAAGCA GGAACGATACGATCAGCAGCCTGCTAATCGGCTTCGGTCAGCTATATAATCTGAAATGGCTTGACTTAAAGTACTGCAAG AATCTCACATCAATTGCATTGCTTCCACCAAATCTAGAGATGTTAGATGCACATGGCTGCAGCAAACTGAAAACAGTTGT AACACCCATGTCCCTTCTTAAGCTTATGGAGCAGGTTCACTCTAAGTTCATTTTCACCAACTGCAACAATCTTGAACAAG TTGCAAAGGATAGCATCACTTCATATGCTCAAAGGAAAAGCCAGCTAGATGCAGCTAGATGCTATAAAGAGGTCACATTC CTCACTTTTACATAA |
| AA seq | Len:965 aa MVASSSVQSPPQHQVFINFRGKHLRNGFVSHLEKALRKDGINVFIDRDETKGKDLSILFSRIEESRIALAIFSALYTESN WCLNELEKIKECVDLGKLVVIPIFYKVETDDVKNLKGVFGDKFWELAKTCKGEKLDKWREALEDVPKKLGFTLSEASDEG EYINKIVGEVIKVLSHVSTGLEGQVPIEYPSAAGQGGEAAALDSPPLFGIETRLRQLEDKLDFQCENTLTIGVVGMPGIG KTTLTRMLYEKWQHKFLRCVFLHDVRKMWKDCMLNRNILMAELLRDDDNVNQQVADLSPESLKALLLSKKSLVVLDNVSD KKQIEVLLGECDWIKKGSLIFITTSDRSVIEGKVDDTYEVLRLSGSDSFQYFTYFAFGGNHSTTPRGNFMNLSRLFADYA KGNPLALKILGAELNEKDETHWEDKLCKLAENPNKTIQNVLQISYNELGQLQKDVFLDVACFFRSGDEYYVRCLVDSCAT DALRDLASKFFINISGGRVEMHDLLYTFGKELGAQGSRRLWNHKGVVGALKKRSGAESVRGIFLDMSELKKKLPLEKCTF SGMHNLRYLKFYNSCCYRECEADCKLNFPEGLEFTLDEVRYLYWLKFPLKKLPKDFNPKNLTDLNLPYSEIDEVWEGVKD TPKLRWIDLSHSIKLSKLSGLRNAENLQRLSLEGCTSLQELPQEMKRMKRLAFLNMRGCTSLRFLPHMNLISLKTLTLTN CSSLEEFRVISDYLETLYLDGTAITQLPTNMVKLQRLIVLNLKDCKMLADVPECLGKLKALQKLVLSGCSKLKTFPTSIE NMKCLQILLLDRTAITDMPKILHSSYSSKMEDLRELRVGMNGLSSSLRRLCLSRNDTISSLLIGFGQLYNLKWLDLKYCK NLTSIALLPPNLEMLDAHGCSKLKTVVTPMSLLKLMEQVHSKFIFTNCNNLEQVAKDSITSYAQRKSQLDAARCYKEVTF LTFT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |