Names & Information
Knowledge of BnaC08G0108800ZY:
| Gene Name | BnaC08G0108800ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:1359 nt ATGGTGATTCCGGTTTTCTACGACGTTGACCCTTCTCATGTTAGAAAGCAGAAGGGGGACTTCGGCAAGGTCTTTAAAGA GACGTGCGAGGGCAAACCGGAGGATGTTAAAAAAAGATGGATAAGAGCTTTAGCAGAGGTAGCAAATATGGCCGGAGAGG ATTCTCGCAATTGCTGTAGCAAAGCGGATATGATTGAGAGGATAGCCAGCGATGTTTTCAGTAAACTGGTTAGAGTAAGA CCATCGCATGATGATTTTAGTGACTTTGTGGGTCTTGAAGCTCATTTAGAGGCAATGAGTTCAATGCTGTGTTTGGGATC TGAGGAAGCTAGAATGAAGGACCTAAAGATATGCCATTTAGGTGTGGTGAAGCAACGTCTGAAGCACAAGAAAGTTCTTA TCATCCTTGATGATGTGGATGATCTTGTGATACTAAAGACCTTGGTGGGAGAAACGGGATGGTTTGGATCAGGGATCATA ATTATTGTGATCACTCAAGACAGGCAGATTCTCAAGTCTCATAACATTGATCTTATTTATGAGGTGGAGTTCCCTTCTGA AGATCTGGCTCTGCAAATGTTCTGTCGATCTGCTTTTGGGGAAAACTCTCCTCCTATTGGTTTCAGTAAGCTAGCTGGCA GAGTTGCACACCTTGCCGGAAATCTTCCTTTGGGTCTCACGGTCTTGGGTTCTTCTTTAAGAGGGAAGAAGGACAAGGAG GAATGGATGGAGATACTGCTGAGGCTTGAACATGGTCTAGATGTCAACTATATCAAAAACTTGCTTGGAGAGAGTGCTAA CATTGGGCTTAATATCCTGGCTGACAAGTCCCTGATATGTATAACGCCACCGCACAGAACTGTACAGATGCAGAAGTTGC TACAGAAGCTTGGTAAAGAAATCGTTCGTGCAGAGTCTATTTACAATCCTGGAAAACGTCGATTCTTGGTGGATGCTAAA GATATTGCTGATGTTTTTGCTGATAATACTGGTACAGAAAATGTGTTAGGCGTATTTTTAAACACATCAGATATCAACGA GCCAATATCTATAGGTAGAAAATCATTCAAAGGAATGCGTAATCTCCAATTCTTAAAAATATACAAGGAGTGGTTGCAGG AAACCAGTGAGGACATATTGTGTTTACCTCGAGGCCTTGTTTATTTACCCCGTAAACTCAGATTGCTATATTGGGATGAA TATCCATTGAAGTATATACCATCTAAATTTAGAACCGATTGTCTGGTCAAACTCACAATGGAGAATAGCAAGCTTGAGAA GATGTGGGATGGAATCCAGGTACTACTTTCCTTTTTTATTTCGTATCCTTCAACAATTTCGCCTAACTTTCCGTTTTAG |
| AA seq | Len:453 aa MVIPVFYDVDPSHVRKQKGDFGKVFKETCEGKPEDVKKRWIRALAEVANMAGEDSRNCCSKADMIERIASDVFSKLVRVR PSHDDFSDFVGLEAHLEAMSSMLCLGSEEARMKDLKICHLGVVKQRLKHKKVLIILDDVDDLVILKTLVGETGWFGSGII IIVITQDRQILKSHNIDLIYEVEFPSEDLALQMFCRSAFGENSPPIGFSKLAGRVAHLAGNLPLGLTVLGSSLRGKKDKE EWMEILLRLEHGLDVNYIKNLLGESANIGLNILADKSLICITPPHRTVQMQKLLQKLGKEIVRAESIYNPGKRRFLVDAK DIADVFADNTGTENVLGVFLNTSDINEPISIGRKSFKGMRNLQFLKIYKEWLQETSEDILCLPRGLVYLPRKLRLLYWDE YPLKYIPSKFRTDCLVKLTMENSKLEKMWDGIQVLLSFFISYPSTISPNFPF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |