Names & Information
Knowledge of BnaC08G0154400ZY:
| Gene Name | BnaC08G0154400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaAnng18220D, partial [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2 |
| NT seq | Len:1800 nt ATGGGAAACGTAGATTCAAGCGTACTTTCAAGCGGCTTGCAAGCTGCAAAAAAATTGTTGTTTGAAAAGGCCAAGTATAT ACTCGATCTGGAAGATCATCTTAAGGATTTGGAAAAAGTTAAGCCAGACCTCGAAGATGCAAAGGTTTACTTGCAGGAGA AACTCGAGATGAATGCTCGAAACGGTTTGCGAAGGCATGAAAGATGTAAGGATTGGATTTCAAAAGTCGAAGCCATCGAA CGAAAGGTCACTAAACTCCTTGAAGATAAGACTGCAGAAATCGAAAGATTGTCTATGTGCGGGTTTTGCTCCAGCAACTT CTTTTTAACCTATTGTTATGGTAAAGATGTATTAGAAACGTTGGAGGAAGTACAAAGTCTTTTGCCTTCAAAACCTTCTG GCGAGGTGGTTAGGACGGGTCCTCCACCTCGTATAGAGGAGATAGCCACTGAACCCACAGTCGGTTTAGAGAAGATGCTT GAGACTACATGGAGCCTTCTCATGGAGAAGGACGTTGGAATCTTGGGTCTTTACGGGATGGGTGGATTTGAGGTCGTGAT ATTTGTATGGGTATCTCGAGATCTACAAGTTGAAAAGATCCAAAATGCGATCGATGACATATGGGAGAAAATGGATTTAA AAAAAATTGGAATTCCATTACCCTCACAAGAAAATGGAAGCAAGGTTGTCTTTACCACTCGCTCGAAAGATGTTTGTGCG CGAATGAGATCTCATCATGTCTTGGAAGTCAAGAAACTAGACGAGGAGAATGCTTGGGAACTATTCCGGCGGAACTTTAG AGGTAACAACACACTAAGTGATCCAGAGATCCTCAAGCTAGCGAGGCAACTTTGTGAGAAATGTGAAGGCTCAGGGCCGC CCTGTGAAGGCTTACCCCTAGCACTCAACGTTATTGGGGAAACAATGGCATACAAAACGTCAGTACCCGAGTGGCAGTGT GCGATTGATGATCTGGATTCAAATGCGGGTGGATATCCAGAAGTTGAAGACGAGATTCTTAAAATTCTCAAGTTTAGCTA TGATGATCTTAAGGACGAGAGAGTAAAGCAATGTTTCCAGTATTGCGCTTTATTTCCACAAGATGCTGGAATTGATAAAG ACGTGTTGGTCGAGTACTGGATATCCGAAAGGATCATAGATGAAGGTGGAGATAGAAAAAGAACTATCAACGAGGGTCAT AAGATAATCGGTGACCTCGTTCGTGCATGTCTCTTGATGACCGTTGACACTTCAGAGAAAGTAAAAATGCATGATGTGCT TCGCCAAATGGCTCTTTGGGTTGCGTCTAGTTTCGGGGAGAAGGATGAGAACTTTATCGTCAAGACGTGTGCTGGACTGA AAGAGATGCCTAAGGTTACGGACTGGAAGGCGGTGAGAAGGATGTCACTTGGAAGAAATGAGATCAGGGACATCTCGATT TCCCCTGACTGTCTTAATCTTACCACGTTGTTGTTAACACGCAGCGGCACGCTGGTGAACATCTCAGGTAAGTTTTTTCA GTCGATGCCTAAGTTAGTGATTTTGGATCTATCTACCAACATAAATCTAGCCAAGTTGCCAGAAGAAGTTTCAAACTTAG TGAGCTTGCGACATCTTGACTTATCAAGAACATGTCTAGAGAACTTGCCTGAAGGATTAGGAAAGTTCATCCAGTTGAGA TACTTTGCTCTGAGAGTTGATAGACGTTATCAAGTTAATGGAAAATTTGAAAGGCTTGGGGATAAGTATCAAGAGTACGG TTGTTTTGAAACATCTTTTAAGTATCCCCAGGTTGGCTAG |
| AA seq | Len:600 aa MGNVDSSVLSSGLQAAKKLLFEKAKYILDLEDHLKDLEKVKPDLEDAKVYLQEKLEMNARNGLRRHERCKDWISKVEAIE RKVTKLLEDKTAEIERLSMCGFCSSNFFLTYCYGKDVLETLEEVQSLLPSKPSGEVVRTGPPPRIEEIATEPTVGLEKML ETTWSLLMEKDVGILGLYGMGGFEVVIFVWVSRDLQVEKIQNAIDDIWEKMDLKKIGIPLPSQENGSKVVFTTRSKDVCA RMRSHHVLEVKKLDEENAWELFRRNFRGNNTLSDPEILKLARQLCEKCEGSGPPCEGLPLALNVIGETMAYKTSVPEWQC AIDDLDSNAGGYPEVEDEILKILKFSYDDLKDERVKQCFQYCALFPQDAGIDKDVLVEYWISERIIDEGGDRKRTINEGH KIIGDLVRACLLMTVDTSEKVKMHDVLRQMALWVASSFGEKDENFIVKTCAGLKEMPKVTDWKAVRRMSLGRNEIRDISI SPDCLNLTTLLLTRSGTLVNISGKFFQSMPKLVILDLSTNINLAKLPEEVSNLVSLRHLDLSRTCLENLPEGLGKFIQLR YFALRVDRRYQVNGKFERLGDKYQEYGCFETSFKYPQVG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At5g63020; K13459 disease resistance protein RPS2 (A) |