Names & Information
Knowledge of BnaC08G0193600ZS:
| Gene Name | BnaC08G0193600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance protein [Brassica rapa subsp. pekinensis] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2523 nt ATGTGGAACGTAGTTTCAAGCGTACTTTCATTCTGCTTTCAACCTGCAAAAAAATGGTTTCTTGAAAAAGCCACGTATAT ACTCGAACTGGAAGATAATCTTGAAGCTTTGCAAACGGTTGCGCCACGCCTAGAAGCAGTGAAGGTTGACTTGCAGAACC AACTCGAGATGGCAGAACGAAAAGGTTTGCGAGGGCTCCACGAATTTAAAGTATGGATTTCAGAAGTGGAAGCCATCCAG CCAAAGGTCGATAAACTGCTTGAAGATAGGAGTGCAGAAATCGAAAGATTGTCTATGTACGGGTACTGCTCCAGCAACTT CTTTTTAACCTATTGTTATGGTAAAGATGTATTCGAAATTTTGGAGAAGGTACAAAGTATTTTGTCCTCAAAATCTTCTG GCGAGGTGGCTAGGATCGGTCCTCCACCTGGTGTAGAGGAGAGAGCCACTCAACGCACAGTCGGTTTAGAGAAGATGCTT GAGGCTACATGGAGCCGTCTCATGGAGAAGGACGTTGGAATCTTGGGTCTTTACGGTATGGGTGGAATAGGGAAGACCAC AATTCTCAAACAAATCAATAAGAAGTTACTTGAAAAAAAAGAAGATGAGTTTGGGGTCGTGATATTTGTAGTGGTGTCTC AAAATCTACAAGTTGGAAAGATCCAAAATGAGATCAGTGAAAGACTAGGTCTCTGTGACATGGCGTGGGAGAAAAAAACT CAGAAAGAGAAAGCCTCTCGTATATATGATGTTCTTAGAAGGACAAGATTCGTTATGTTATTAGATGACATATGGAGGAA AGTGGATATAGAAGATGAGATTGGGATTCCATTACCCTCTCCAGAAAATGGAAGCAAGGTTGTCTTTACCACTCGCTCGA AATACGTTTGTGGGCGAATGGGACCTCATGACGTGGAAGTCAAGCAACTAGACCCGGAGAATGCTTGGGAACTATTCCGA CAGAAAGTGAGAGGTACGACACTTGACAATGATCCAAAGATCCTCCAGCTAGCAAGAAAAGTTTGTGAAAAATGTAAAGG CTTACCCCTAGCACTCAATGTTATTGGGGAAACAATGGCATGCAAAACGACGGTACGTGAGTGGCAGTGGGCGATTGATG TTCTAAATACAAATGCGGCTAAATATTCAGAAGTTGAAGATGAGATTCTTAAAGTTCTCAAGCTTAGCTATGATGATCTT AAGGACGAGACAGTACAGGAATGTTTCCAGTATTGTGCTTTATTTCCAGAAGATAATAAAATTGAAAAAGATGTATTGGT CGAGTACTGGATATCCGAAGGGATCATAAATGGAGGTGGAGATAAAGAAAGAGCTACCAACCAGGGTTATAGAATAATCG GTATCCTCGTTAATGCATGTCTGTTGATGCCGGTTGACACTTTCGAAATTGTAACAATGCATGATGTGCTTCGTCAAATG GCTCTGTGGGTTGCATCTAATTTTGGGAAAGAGGAAGAGAAGTTTATCGTCAAGACAGGTGCTGGACTGCATCAGATGCC TCAGGTTAGGGACTGGAAAGCGGTGAGAAGAATGTCACTGGCAAATAATGAGATTAAGAACATCTCGATCTCCCCGGTGT GTCCTAACCTTACCACACTGTTGTTAGCATACAACAATCTGGTGAACATCTCAGGTGAATTTTTTCTATCAATGCCTAAT TTAGTGATTTTGGATCTATGTTCCAACAAAAATCTAACCAAGTTGCCAGAAGAAGTTTCAAGCTTAGTGAGCTTGCGATA TCTTGACTTATCAAGAACAAGACTAGAGAACTTGCCTGTAGGATTTGGAAAGTTGATCCAGCTGAGATACCTTGATTTGT CAGACGTACAAACTCTTCAAAGCATCAGTGTGGTATCAAGTTTGGTAAATATAGAAATTCTATTGTTAGATCAGACTACT TTTGTAAGTCTGGAGTTGATAGAGGATATCAAGTTACTGGAGAATTTGAAAGGCTTGGGGGGAATTGTAGCAAAAGACGG TCCGTTGCAGTTAGAAACGGCTATGGCTAGCCTTCGCTCTATCGTGATACAAGGATCTATCATCTCTGATATAATGGAGC ATACGAGATATGGATGCAGAAGTATTAGTGCCATATGCTTCCAAAACCTCACATTTGTCGCTTTTGTTCGCGTCAGTGGT ATACAGGATTTGTCGTGGTTAATCTTTGCTGTGAATCTTACGTTTGTACTCGTACATGGGCCATCACCGGAGTTGCAAGA AATTGTAAGCAGAGAAAAGGTTTCTTGTAAACTAAACAAGGGATCGAGTATTGAACCCTTTCGAAAACTGCATACGATTC ACTTAAGCTGTTTGACGGAACTGAAGAGTATCTACTGGGAACGGTTGGAATTGCCAAGTCTAAAAAGAGTGATAATAAAA CACTGTCCAAAGCTGAAAAAGCTTCCATTTAACAAGGAGAGGGCATACTACTTTGACCTACATGTAGAAAAGCCAGAATG GTTCGAAAGACTTGAGTGGGAAGATGAAGCTACTGAAGAATAA |
| AA seq | Len:841 aa MWNVVSSVLSFCFQPAKKWFLEKATYILELEDNLEALQTVAPRLEAVKVDLQNQLEMAERKGLRGLHEFKVWISEVEAIQ PKVDKLLEDRSAEIERLSMYGYCSSNFFLTYCYGKDVFEILEKVQSILSSKSSGEVARIGPPPGVEERATQRTVGLEKML EATWSRLMEKDVGILGLYGMGGIGKTTILKQINKKLLEKKEDEFGVVIFVVVSQNLQVGKIQNEISERLGLCDMAWEKKT QKEKASRIYDVLRRTRFVMLLDDIWRKVDIEDEIGIPLPSPENGSKVVFTTRSKYVCGRMGPHDVEVKQLDPENAWELFR QKVRGTTLDNDPKILQLARKVCEKCKGLPLALNVIGETMACKTTVREWQWAIDVLNTNAAKYSEVEDEILKVLKLSYDDL KDETVQECFQYCALFPEDNKIEKDVLVEYWISEGIINGGGDKERATNQGYRIIGILVNACLLMPVDTFEIVTMHDVLRQM ALWVASNFGKEEEKFIVKTGAGLHQMPQVRDWKAVRRMSLANNEIKNISISPVCPNLTTLLLAYNNLVNISGEFFLSMPN LVILDLCSNKNLTKLPEEVSSLVSLRYLDLSRTRLENLPVGFGKLIQLRYLDLSDVQTLQSISVVSSLVNIEILLLDQTT FVSLELIEDIKLLENLKGLGGIVAKDGPLQLETAMASLRSIVIQGSIISDIMEHTRYGCRSISAICFQNLTFVAFVRVSG IQDLSWLIFAVNLTFVLVHGPSPELQEIVSREKVSCKLNKGSSIEPFRKLHTIHLSCLTELKSIYWERLELPSLKRVIIK HCPKLKKLPFNKERAYYFDLHVEKPEWFERLEWEDEATEE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | RGA-7; putative disease resistance protein At4g10780; K13459 disease resistance protein RPS2 (A) |