Names & Information
Knowledge of BnaC08G0216000ZS:
| Gene Name | BnaC08G0216000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC08g15510D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g12290 PE=2 SV=1 |
| NT seq | Len:1914 nt ATGCTGAAAAAAGTTGAAGTTTTAGAATCTAAAGGAGTGTTTGAAGCGATAGCTGTGGCAGTGGAGAGGCCTTTACCAAA GACGATTGTTGGTCAAGAAAAAATGCTCAAAAGGGCAATGGAGCACCTCATGGATCATGAGACTGGGATTATGGGTCTCT ATGGTATGGGTGGAGTAGGAAAAACAACTCTTCTCGAACAGATCAACAATAAATTTATTGAGCACACAGTTGACGGGGTC GAAATTGTCATATTTGTTGTGGTGTCCAGCGAGCTACGGGTTGAGATGATTCAAGATGCGATTGCTGAGAAACTAGGATT TCTTAGAGAGGATTGGAAACAAAAAGAGAAGAGCCAGAAGGTCGCTGATTTGTACGCTCGTATGAAGACAATGAAATTTG TCTTGTTATTGGATGACATTTGGAAAGAAGTGGATTTAAAAGAAATCGGAGTCCCATTTCCGACTAGGGAAAATGGATGC AAAGTAGTGTTCACTACTCGTTCTAGGGAAGTATGTGGCCAAATGAGGGTTGATGATCCAATGGAAGTTAAGTGTTTGGA GTCCAACGAAGCTTGGGATTTATTCCGTAGTAATGTTGGGAAAATCACATTAGAAAGCCACCCAGATATTCTTGAGCTAT TCAAGAATATGGCGGTTCTCAGTAAGCTCGAAATGGAGCATAGTAGAATGGTGGAGATAAATGTCAAGAGGAGTACACCA TCATTGAACAAAAGTCCAACAAATGTAAGCTTCCCAAACCTCTCTACACTGAAGAGCATCTATTGGGGTCCTCTCCCTTT CCCACGTTTGAAGAAATTCAGGATAGATAGGTGTCCAAATCTGAGAAAGCTTCCATTTGATTCTAAAAGTTGCAGCAGCG CGGGTGAAGAGCTTGTCATCCACAGTGGAGAACGGGACTGGATAGATAAGGTTGAGTGGGAGGACGAAGAGACTAAAGAG CGTTTCCCACGTTCCATCGGTCCTTCCGAAACTGAAACATTGGTGTTTCTAATCAATTTATTTTCTATATGTTCATGTGA ATTCTTATGGTCTAAGTCTAGGCTAGTTGTCTCAGATTCATGGACTAGTAATCTCAGTCAATTGTTATATTCTCAAAACG TTTGTATTGATCGTTCTGCCCTTTCTTCTACCACTTCTGTATCCTTAAGTGTTCATCTGATCATTCTACTGTATGCGTTG CTGAGGTTCTTGTGCTACTTGGGAATTCTGAAATGGAACTCAAGTCTCCGGAAACTGCCGAAACAAGTATCAGAGTTGGT CTCCTTGCGCTATCTTGACTTGTCATGGAAATACATGAAGCGGCTACCTCTTGGTTTACAAGAGTTGAAAAAACTCGTAC ATTTGAGGTTGGATTACATGAAGAGACTTAAGAGTGTTTCAGGGATATTAAAACTGTCTAGTTTGATGAAACTGCAACTA CTAGAGTCTAAAATGTCGCTAGACATGAGCTTAATGGAGGAGTTGCAGCTCTTGGAACATTTACAAGTCTTAAACATAAG TATCAAGTCAAGTTTGGTTGTGGAGAAGTTGTTATATGCTCCCAGGACTAGTAGAAGCAATAATAAGCCAGGAGAAAGCG CTATGAGTGTTAATATCATTCCTTTCCAGAAACTAGAGAGTCTACGCTTACACAATCTAGCTACGTTGAAGAACATATAT TGGGAACCTCTGCCTTTTCCATGTCTAAAGACAATCCACGTAACAGAATGTCCAGAGTCGAGAAAGCTCCCATTGGATTC TCAAAGTGTCTCCAGGGTTGAAGAGTTTGTTATTAAGTACAAGGAGGAAGAATGGTTTGAAAGGGTTGAATGGGATGATG AAGCCACTAGACTCCGTTTTTTACCCTTTCTTAAGTTTTTTGGACCTGAATGGCAAGTTACCTATGTGCTGTAG |
| AA seq | Len:638 aa MLKKVEVLESKGVFEAIAVAVERPLPKTIVGQEKMLKRAMEHLMDHETGIMGLYGMGGVGKTTLLEQINNKFIEHTVDGV EIVIFVVVSSELRVEMIQDAIAEKLGFLREDWKQKEKSQKVADLYARMKTMKFVLLLDDIWKEVDLKEIGVPFPTRENGC KVVFTTRSREVCGQMRVDDPMEVKCLESNEAWDLFRSNVGKITLESHPDILELFKNMAVLSKLEMEHSRMVEINVKRSTP SLNKSPTNVSFPNLSTLKSIYWGPLPFPRLKKFRIDRCPNLRKLPFDSKSCSSAGEELVIHSGERDWIDKVEWEDEETKE RFPRSIGPSETETLVFLINLFSICSCEFLWSKSRLVVSDSWTSNLSQLLYSQNVCIDRSALSSTTSVSLSVHLIILLYAL LRFLCYLGILKWNSSLRKLPKQVSELVSLRYLDLSWKYMKRLPLGLQELKKLVHLRLDYMKRLKSVSGILKLSSLMKLQL LESKMSLDMSLMEELQLLEHLQVLNISIKSSLVVEKLLYAPRTSRSNNKPGESAMSVNIIPFQKLESLRLHNLATLKNIY WEPLPFPCLKTIHVTECPESRKLPLDSQSVSRVEEFVIKYKEEEWFERVEWDDEATRLRFLPFLKFFGPEWQVTYVL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein RPS5-like; K13459 disease resistance protein RPS2 (A) |