Names & Information
Knowledge of BnaC08G0240400ZY:
| Gene Name | BnaC08G0240400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA08g20150D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:2484 nt ATGGAGGGAAGCCATGAAAATAGTGGGGAATATCTCCGGATATGTGTAATCAGAGAAAACTCGGTTGAAGAGGACCTGAT AGAGCTTGTGGTGAAAAGCGTTTTAGCACAAGTGAGCAATACGCCCGAGAAAGTTGGAGAATACTCGGTGGGGCTGGAAT CACGTGTCCAGGACTTGATGAATCTGATCAACTTAAAACCCAGTTGTGACGATGTTCAAATCCTGGGACTTTATCGTATG GGCGGTATTGGTAAGACAACTCTTGCAAAAGCCTTCTATAACAAGATCATTGCAGAGTTCGAGCATAGAGTTTTCATCTC AAACGTTAGAGAAAACTCATCAGACCAAGATGGTTTAGTCAATCTACAAAAGAGTTTCATCAAGGCACTTCTCCATTCGG TACCTGAAATAGAAGATGCTAACGGAGGCATAGACAAGATAAGAACAAGTGTTCATGCGAAGAAGATTCTTGTGGTTTTA GATGATGTTGATAATGTAGACCAGCTTAATGCCCTGGTTGGTGAAAAAAGTTGGTACGGTGAAGGAACTGTTATAGTCAT CACAACCAGAGATGAAGAGATTCTGAGTAGGCCCTCTGTGAACCAAAAGTATGAGGAAAAGAAAGAACCAACAGAGAGTC TTATCGAGTTGTCAAAGAAGATTGTCAAGATAACAGGACTCTTGCCATTGGCTATTGAAGTGTTTGTCTTCCTCGACATT GCGTGTCTCTTCCTTAAAATGGAGATAAAGAAAGAGGAAGTCATCGATGTACTGAAAGGTTGTGGGTTTAAAGCTGAGGC TGCTCTCAATGTGCTAAGACAGAAGGATCATCTATCATCCATCCAAGGAATAGTATTGGACTTCAAAAAGAAGTTAGCTA GGGACCCAAGTGCAGAGGAAATTGCATTCAGGAATCTACATGACAAGCCAGGCATAAGATCAGTGTTTAGTTACCTGAAG AATAAGTTTGTAAAGTTTCCAGCAGAGGAAAAGCCAAAAAGTTCTGAAATCACCACTCATGTTGAGCCTTTTGTACCAAT GAAGAAGTTGAGACTTCTTCAGATTAATCATGTGGAGCTTGAAGGAGATCTTAAGCTCCTTCCATCTGAACTCAAATGGA TACAATGGAGAGGTTGCCCATTAAAGGATGTTCCACCAGTTTTTCTTGCTAGGCAACTTGCCGTTCTTGATCTTGCAGAC AGTGGAATAAGACGAGTTCAGAGTTTGCACAGAAAAGAGATGGATGGGAACTTGAAGGTTGTAAATTTGCGTGGTTGCCA CAGCTTAGAAGCTATTCCTGATTTATCAAACCATAAATCCCTGGAGAAGCTTATTCTGGAACGATGCATGCTTCTGGTGA AGGTTCCTAGATCAGTTGGTAATCTGAGTAAATTGCTTCAACTGGACTTCAGTTACTGTTCGAATCTTACCGAGTTTCTT GTGGATGTTTCTGGACTAAAGAGTCTTGAAAAGCTTTTCCTCTCTGGCTGTTCAAATCTGAGTGTCTTACCAGAAAACAT TGGTGACATGCCATGTTTGAAAGAGCTTCTTCTTGATGCTCGCAGTTGGGGGATAGGTGGTAAGATCCCAGATGTTCTTG GAAAGCTTTCATCTCTGAAGATACTTAAACTGGGGAATAACTATTTTCACAGTCTTCCATCTAGCCTCGAGGGGTTATTG AATCTCAGAGAACTTTCATTGTATGACTGCCGAGAGCTAAAGTGTCTTCCTCCTCTTCCATGTAACTTGGAGCAGCTTAA CCTAGCAAATTGCTTTTCATTGGAGAGTATATCAGACCTTTCCAAGCTGAAGATCTTGCATGAACTCAATCTCACAAACT GTAAGAAAGTGGATGACATTCCAGGACTAGAGCACTTGAAGGCTCTGAAACGGTTATACATGAGCGGCTGTAAGTCCAAG TGCTCTTCTGAAGTAAAGAAAAGACTCTCCAAGGCTTCTTTGAAAATGATGGTGAATCTGAGCTTACCTGGAAACAGAAT CCCAGTCTGGTTCTCACAAGGCCCTCTCAGATACACAACTCAGCCGAACAGAGAGCTCAGAGGCGTAATCCTGGCCGTAG TTGTGGCTCTTAACCATGAACGCAAAGATGACTACCAGCTTCCTGATGTGGTGGAGGTTCAAGCCCAAATTCTCAAACTT GATCTAGCCTTATACACCCACACATTGCACCTCTCTGGAGTGCCTAGAACAAGTGATGACCAACTCCACATCTGCAGATA CTCAGCTATGCATCCAATGGTAGCTATGTTTAAAGACGGGTACACAATACAAGTCACCAAACGTGAACCACCAGTCAAAC AAGGCGTTGAGCTAAAGATGCATGGGATTCATCTGGTTTACGAAGGGGATGATGATTTTAAAGGCGAAGAGAGTGACTTC ACCGAGACACAGAAACTTACCAATTTTTTCAGCACTTTTGAAGAAGGTGAGGCCAGCTCAAAAGGTGGTTCTGAGTTTAC ATGA |
| AA seq | Len:828 aa MEGSHENSGEYLRICVIRENSVEEDLIELVVKSVLAQVSNTPEKVGEYSVGLESRVQDLMNLINLKPSCDDVQILGLYRM GGIGKTTLAKAFYNKIIAEFEHRVFISNVRENSSDQDGLVNLQKSFIKALLHSVPEIEDANGGIDKIRTSVHAKKILVVL DDVDNVDQLNALVGEKSWYGEGTVIVITTRDEEILSRPSVNQKYEEKKEPTESLIELSKKIVKITGLLPLAIEVFVFLDI ACLFLKMEIKKEEVIDVLKGCGFKAEAALNVLRQKDHLSSIQGIVLDFKKKLARDPSAEEIAFRNLHDKPGIRSVFSYLK NKFVKFPAEEKPKSSEITTHVEPFVPMKKLRLLQINHVELEGDLKLLPSELKWIQWRGCPLKDVPPVFLARQLAVLDLAD SGIRRVQSLHRKEMDGNLKVVNLRGCHSLEAIPDLSNHKSLEKLILERCMLLVKVPRSVGNLSKLLQLDFSYCSNLTEFL VDVSGLKSLEKLFLSGCSNLSVLPENIGDMPCLKELLLDARSWGIGGKIPDVLGKLSSLKILKLGNNYFHSLPSSLEGLL NLRELSLYDCRELKCLPPLPCNLEQLNLANCFSLESISDLSKLKILHELNLTNCKKVDDIPGLEHLKALKRLYMSGCKSK CSSEVKKRLSKASLKMMVNLSLPGNRIPVWFSQGPLRYTTQPNRELRGVILAVVVALNHERKDDYQLPDVVEVQAQILKL DLALYTHTLHLSGVPRTSDDQLHICRYSAMHPMVAMFKDGYTIQVTKREPPVKQGVELKMHGIHLVYEGDDDFKGEESDF TETQKLTNFFSTFEEGEASSKGGSEFT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | leucine-rich repeat-containing protein, putative; K19613 leucine-rich repeat protein SHOC2 (A) |