Names & Information
Knowledge of BnaC08G0245500GG:
| Gene Name | BnaC08G0245500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC08g48650D [Brassica napus] |
| Best Hit (SwissProt) | Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=3 |
| NT seq | Len:2487 nt ATGCGCCTAATCACCTCCTCCTACGCATCTCTTGGACGCTTCCTCTTATTGTGCTGCGCCATCTTCATCTCGCGTGCGCC GTCGGCGCTTTCTCTTAACGGGAGCAGCTTCGATCCATATCCACGCGAAGAAGAGATCTCTCTTCCCACCGTGATGTCGA AAGCTCGTGTGTACACCGACGTGAACGTGATCCGTCCCAAAGAGTATTGGGATTACGAGTCTCTCAATGTTGAGTGGGGG GAGCAAGATGATTACGAGGTAGTGAGGAAAGTGGGGAGAGGCAAATACAGTGAAGTTTTCGAGGGGATTAACATGAACAG CAACGAGAAATGTGTTATCAAGATTCTTAAGCCTGTCAAGAAGAAGAAGATTAGAAGAGAGATTAAGATACTTCAGAATC TCTGTGGAGGCCCAAATATTGTGAAGCTGCTCGATGTTGTCAGAGACCAACACTCAAAAACCCCAAGCTTGATATTTGAG TATGTTAACAGCACTGACTTTAAGGTTCTGTATCCTACTTTGACTGACTATGACATCCGATACTACATCTACGAGCTGCT GAAGGCATTGGACTACTGCCACTCGCAAGGTATAATGCACAGAGATGTCAAGCCACACAATGTCATGATCGACCATGAGC TGCGCAAACTTCGCCTTATAGATTGGGGTCTCGCTGAGTTTTATCATCCTGGAAAAGAGTATAACGTCCGTGTGGCCTCC AGGTACTTCAAGGGACCCGAACTTTTAGTGGATTTACAGGACTATGACTATTCCTTGGACATGTGGAGCCTCGGTTGCAT GTTTGCTGGGATGATATTCCGCAAGGAACCTTTCTTCTATGGCCATGACAACCAGGATCAGCTTGTCAAAATTGCCAAGG TCCTTGGAACCGATGAATTGAATGCATATCTGAACAAGTATCAGTTAGAACTTGACGCTCAATTAGAGGCACTTGTTGGG AGACATAGCAGGAAGCCTTGGTCCAAATTCATCAATGCTGACAATAGGCATTTGGTCTCACCTGAGGCGATTGATTTCCT GGACAAGCTACTTCGGTATGATCATCAAGACAGGTCTGAGACTTTTATCCGAGATCCGGATCCGATCCGAAAATCTGGAT ATCCGGAGATGTCGAATTCGGATCCGGATAGTAAAATGTTGGATCCGTCAAAACCGAATCCGGATCCGGATATCTTGATT TTTAGTCCGGATATCCAGATCCAAGGATATCCGACATCCGGATATCCGCGAACCCCAGATCCAGATAAAGATAATAAAAT TATAGATCTGTCGGATAAAGATCCGAATATCTTAAAATTGCCCGGATATCCAATCCGTCTTAGGCCTATCGTGCGTATAG TATGGAACCGTCTCATGGAAGATGGAGTTGGGGTTTTAGGTTTGTATGGTATGGGTGGAGTTGGCAAAACCACTCTTCTT GCGCAGATCAACAATAGTTTTACTAAAACACGGAAATTTGTGTTATTCTTCGATGATATATGGGCGAAAATTAATTTAAC GATTGGAGTCCCTTATCCGAATATAGCAAATGGATGCAAAGTAGTGTTCACCACTCGCTCTAGAGATGTGTGTGGGCGCA TGGAGGTTGAGGACCTGATCGAAGTCTGTTGTCTAGGTTCCGACAAAGCATGGGAGTTGTTCCAAAAGAAAGTTGGAGAA AGGACATTGAAAATCCATGCAGACATTCCTGATCTCGCAAAACAAGTCGCTGGAAAATGTTTTGGCTTACCATTGGCACT AGTGCCGGTCCTGAGATATTGGCGTACGGTACAAGAATGGCGTCATGCAATGGACGGATTCATAGATGAAAGCCAAGGTA GAGAAAGGGCAATAAACCAAGAGCTGCAGCTCCTGGAATATCTTGAAAATCTTACCATTGAGGTCAGATCAGGGTTTGTT TTGGATCAACTGTTAAGTTCTCCTATGTTGGTAAAATGCATCCGAAAGGTAGGCATCAACAGTATTGGAGAATCAACGAA AGTATTGACTTTGCTAGCTACGAGTGATCTACGTAGGCTCAACCTAACGGGATGCACAATGGGGAAAATACAGATTGAGA GGACAACTCCATGTTTCCAAAGTCTCTCCCAAGTCGATATATGTGTTTGCTATCGTCTTAAAGATTTGACGTGGCTGGTG TTTGCTCCAAACCTTGTTGATCTTAGAGTTAAATACTCAAATCAATTGGAAGAGATTATAAGCAAGATCAACATTTCAGA ATGTCCGATGCTGAGAAAGTTTCCGTTGGATTCTAACAGTGTTGTCAGGTTTGAAGTATTTTTCATTGAATACGCAGAGG AAGGGTGGATTAAAGAGGTTGAATGGGAAGACGAAGCAACTCAACTGCGTTTCTTGCCTTTTTGTAAGCTTAGCCCCGAC CCGATAATATCACCAAATAAATCTAATACCCATACTCAATCCATAAACAGTGTAGAAGGTAACAACCAGTTATTTCATTA TTTTTGA |
| AA seq | Len:829 aa MRLITSSYASLGRFLLLCCAIFISRAPSALSLNGSSFDPYPREEEISLPTVMSKARVYTDVNVIRPKEYWDYESLNVEWG EQDDYEVVRKVGRGKYSEVFEGINMNSNEKCVIKILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFE YVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVAS RYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLNKYQLELDAQLEALVG RHSRKPWSKFINADNRHLVSPEAIDFLDKLLRYDHQDRSETFIRDPDPIRKSGYPEMSNSDPDSKMLDPSKPNPDPDILI FSPDIQIQGYPTSGYPRTPDPDKDNKIIDLSDKDPNILKLPGYPIRLRPIVRIVWNRLMEDGVGVLGLYGMGGVGKTTLL AQINNSFTKTRKFVLFFDDIWAKINLTIGVPYPNIANGCKVVFTTRSRDVCGRMEVEDLIEVCCLGSDKAWELFQKKVGE RTLKIHADIPDLAKQVAGKCFGLPLALVPVLRYWRTVQEWRHAMDGFIDESQGRERAINQELQLLEYLENLTIEVRSGFV LDQLLSSPMLVKCIRKVGINSIGESTKVLTLLATSDLRRLNLTGCTMGKIQIERTTPCFQSLSQVDICVCYRLKDLTWLV FAPNLVDLRVKYSNQLEEIISKINISECPMLRKFPLDSNSVVRFEVFFIEYAEEGWIKEVEWEDEATQLRFLPFCKLSPD PIISPNKSNTHTQSINSVEGNNQLFHYF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0004672 |
| Pfam | NB-ARC domain |
| KEGG | casein kinase II subunit alpha-like; K03097 casein kinase II subunit alpha [EC:2.7.11.1] (A) |