Names & Information
Knowledge of BnaC08G0259900GG:
| Gene Name | BnaC08G0259900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g32090D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:2151 nt ATGGAGGAGGTCTCTTCCTCTTCCAAAGTCAAGGCACTTCCTTTGCCTCCCCAGCACCAAGTGTTTGTAAACTTCAGGGG AGATGAGTTGCGGTACAACTTCGTTAGCCATCTCACAAGTGCATTGCTCAGAGATGGGGTCAACATCTTCATTGACACGA ATGAGGAAAAAGGAAAATCTTTAAATGTGCTTTTCGAGAGGATTGAAGAGTCGAGGATCGCCTTGGCTCTCTTTTCTGTG AGGTACACCGAGTCAAAATGGTGCCTGAACGAACTTGTGAAGATGAAAGAATGCATGGACAAAGGTCAACTCCTCATCAT TCCCATCTTTTACAAGGTTCAAGCATACGAAGTTCGGTTTCAGAAGGGACGGTTCGGTTATTTGTTCAACAAGTTGCGCC ATGTTGACGTTGACAAGAAGAAGCAGTGGTCTGAAGCTTTGAACTCTGTCGCTGACCGAATAGGCTTCTGCTTCGACGGA AAGAGCGACGAAAACAAGTTCATCGACAGTATCGTCGAAAAGGTTAAGCAAGCGCTGAGAAAAATTCAGTTGGATGAAAG CAAAGTCAACTCAGTTTTTCTTTCAAAAAACACTTCGTTGCACTTAGGAAGAGAAAACAATGAGATTTATGGACTCAAGC AACGCTTGGACGAATTGGAGGAGAAGTTTGATCTTGACTGTCAGGAGACTCGATATTTGGGAGTTGTTGGGATGCCAGGC ATCGGTAAAACCACTCTTGCAAGGGAGTTATATGAAACTTGGCAGTGCAAATTCGTAAGTCACGTGTTAATCCAAGATAT TCGTAGAACTTCCAAGGAGCTCGGGTTGGATTGCTTGCCTGCACTACTCTTGAAAGAATTACTCGGTGTAAGAAATTCAG ACGTAAAATCTTCTCAAGGCGCCTACGAATCCTACAAGAATGAACTACTCAAACATAAAGTTCTCGTTGTTCTCGACGAT GTGAGTGACAGAAAGCAGATAGAGGTTCTTCTGGGGAGATGCGACTGGATTAGGCAGGGAAGTAGAATTGTCATTTCAAC AAGCGACAAGTCACTGATCCAAGATGTTGTCGACTATACTTATGTTGTCCCACAGTTAAACCACAAAGACGGACTAGGTC ACTTTGGGCGTTATGCCTTTGACCATCATTCCAGCAAACACAACAATGAAGTCATCATGAAGCTATCAAAAGAGTTTGTG CATTATGTTAGAGGTCATCCGCTAGCTCTTAAGTTGTTGGGCGCAGATCTTAATGGGAAAGACGAGGGCTATTGGAAAAC AATACTGGCAACACTCTCCCAAAGTTCCTGCCCGTGTATTCGAGATGTGTTGGAAGAAAGCTATAATGAGTTGAGTCAAG AGCACAAAGAGATATTTCTCGACATGGCTTGTTTTAGAAAGGAAGATGAGAGTTACGTTGCAAGTTTACTGGATACATCT GAAGCCGCAAGAGAAATAAAAACTCTCATGAACAAATTCATGATAGATGTTTCTGATGGGCGAGTAGAGATGCATGATAT ACTATATACCTTCGCCAAGGAGATTTGCCGAAGAGCACATGCTCAAGATGGAAAGGGGGGACATAGGTTGTGGCATCACC AAGACATCATTGATGTACTACAGAACATAGAGGAAGGCGAGAATGTTAGAGGGATTTTCCTAAACATGAATGAAATGAAG AGGGAGATGAGCTTAGACAGTTCCACCTTTGAACCAATGCACGATCTCAGATACCTCAAGATCTATAGCTCAGGTTGTCC TCAGCAATATGGTACGAGCGAGATACCGGGGCTCGAAGTGCTCAAGTGTGGCTTAAGGTTTTTTATAGGTGGTGAGAGCA GTGGAGAGTGTTTAAAGAAGTTGGAAGTGAAGGATGCTGAACAGAATCTAAGTGCACAAAAGTTATCAGATAACTGGACG AGTGAATCAGTAACCACTACTGAGGTTGCTGTTTTGCCTGAAAATGCAAACAGTGCAGAACAGAGCCCAGAGACGGCTAC AACAGCGGTTACGGCTTCACCAGAAAAAGCTAACAGTGCAGAATTTCAAATGGAAATCTCCACAACCCCACGTGAAGGTC AACCACCCCCATGTATAAAAACTTCGAAATGGGTATGCTTTGCTTGTTTTGACTTGAGAAAACATCTATGA |
| AA seq | Len:717 aa MEEVSSSSKVKALPLPPQHQVFVNFRGDELRYNFVSHLTSALLRDGVNIFIDTNEEKGKSLNVLFERIEESRIALALFSV RYTESKWCLNELVKMKECMDKGQLLIIPIFYKVQAYEVRFQKGRFGYLFNKLRHVDVDKKKQWSEALNSVADRIGFCFDG KSDENKFIDSIVEKVKQALRKIQLDESKVNSVFLSKNTSLHLGRENNEIYGLKQRLDELEEKFDLDCQETRYLGVVGMPG IGKTTLARELYETWQCKFVSHVLIQDIRRTSKELGLDCLPALLLKELLGVRNSDVKSSQGAYESYKNELLKHKVLVVLDD VSDRKQIEVLLGRCDWIRQGSRIVISTSDKSLIQDVVDYTYVVPQLNHKDGLGHFGRYAFDHHSSKHNNEVIMKLSKEFV HYVRGHPLALKLLGADLNGKDEGYWKTILATLSQSSCPCIRDVLEESYNELSQEHKEIFLDMACFRKEDESYVASLLDTS EAAREIKTLMNKFMIDVSDGRVEMHDILYTFAKEICRRAHAQDGKGGHRLWHHQDIIDVLQNIEEGENVRGIFLNMNEMK REMSLDSSTFEPMHDLRYLKIYSSGCPQQYGTSEIPGLEVLKCGLRFFIGGESSGECLKKLEVKDAEQNLSAQKLSDNWT SESVTTTEVAVLPENANSAEQSPETATTAVTASPEKANSAEFQMEISTTPREGQPPPCIKTSKWVCFACFDLRKHL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |