Names & Information
Knowledge of BnaC08G0261900ZY:
| Gene Name | BnaC08G0261900ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng64090D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2625 nt ATGGGAAGTTGTTTATCGGTCTCCATGCCATGTGATCAAGCTGTGAATCAAGTCTCTCAATGTTTATCCGTCAATGGAAG TTACATCTACAACCTTTCCAAAAATCTTGAAGCTCTGCATAAAGAGATGGAAGTGCTCAAGGCAAAGCGAGATGATGTGC AAGCAAGGGTAAGCAGAGAAGAGTTTACAAGGCGTCGTAAAATGCTTGCTCAAGTCCAGGTATGGCTTAAGAATGTCCTC GACATCGAGGATGAATTTAAAGATCTAGTTAGTACTAGTACCGCTGAAGTTCAAAGGTTGTGTTGTTGTGGATTATGCTC CAAGAATGTGGAAATGAGCTACCGTTATGGCAAAAGAGTAATCCGGATGTGGAAAAGGGTTAAGAGTACCAGTTCACAAG GAGATTTTGATTTGGTGACTGAGGAAGTTCATGTAACTGAGGTTGAAGAGATGCCTATTCAACCCACAATTGTTGGTCAT GAAGCATTGCTTGAGAGGGTATGGAACCGTCTCATGGACGATGGAGTTGGGGTTTTGGGTTTGTATGGTATGGGTGGAGT TGGCAAAACCACTCTTCTTGCGCAGATCAACAATATGTTTACTAAGGCAAGGGGCAGCTTTGATATTGTGATATGGGTTG TGGTGTCTAAGAGTTTAGACATCCTTAAGATTCAAGAAGACATAGCAAAAAAAATAGGGCTTTGGAATGAGGAGTGGGAT AAAGAGAATGAGAACCGTAGAGCCCTTGACATACACAATGTTCTCAAGAGACGAAAGTTTGTGTTGTTCTTGGATGATAT ATGGGCGAAAGTGAATTTATCGACGGTTGGAGTCCCTTATCCGGATGTAGTAAATGGATGCAAGGTAGCGTTCACCACTC GCTCTAGAGGTGTCTGTGGACGCATGGAGGTTGATGAACTGATAGAAGTCAGTTGTCTAGGTCCCGACAAATCATGGGAG TTGTTCCAAAAGAAAGTTGGAGAAAGCACATTGAAAATCCATGCAGACATTCATCATCTCGCAAGACAAGTCTCTGGAAA ATGTTCTGGCTTACCGTTGGCTCTTAACGTAATTGGGGAAACTATGTCATGCAAAAGTACAGTACAAGAATGGCGTCATG CAATGGATGTGTTGACGTTATCGGCGGCAGACTTTTCAAGCATGAAAGATGAGATTTTTCATATTCTCAAGTATAGCTAT GACAGTTTAAATGGAGAGGTGGTGAAATCATGTTTTCTATATTGCTCCCTTTTTCCTGAAGATTATCTTATAGAAAAAGA GAGATTGGTAGATTATTGGATATGTGAAGGATTCATAGATGAAAGTCAAGGTAGAGAAAGGGCAATGAACGAAGTTTATG AGATACTTGGCACCCTTGTCCGCGCATCGTCTGATCTTGGAAAGAATAAGGAGATATTCATTGTGCAAGCTGGTGTTGAT TTACGCAATATGCCATATGTCAAGAATTGGAAAGGTGTGAAAAAAATGTCACTGATGCGTAATAATATTGAGAGGATATG TGGCAGCCTCGAATGCGCTCAACTTACAACTTTATTTCTTCAGAAAAACCAACCATTGGTACATGTTTGCAGTGACTTCT TCATGTATGTTCCAATGCTACTTGTGTTGGATCTGTCAGGCAATTTAGGCCTCTCTGAGTTACCACTGATTCATTTGGTA TCATTGCGGTATCTTGATTTGTCACGAACAAGCTTGAGGCGATTGCATGTTGGATTACAAGAGATGAAAAAGCTAATCCA CTTGAATCTGGAGTCCACACGGAAGCTTGTGAGCATTTCAGGGATATCAAATTTGCCAAGTTTGAGGTCACTTCGACTAC AAGGATCCAACAAGACGCTAGATATGAGCTTACTGAAAGAGCTGCAACTTGTGGAACATCTAGAAAATCTAACCATTGAG GTCAGTTCAGGGATGGTTTTGGAGCAACTGTTAAGCTCTCACATGTTGGTGAAATGCATTCAAAAGGTAAGATTCAACAA CCTTGGAGAATCAACGAAAGTATTGACTTTGCCAACTATGTGTGTTCTACGTAGGCTCAATGTATCAGGATGCAGAATGG GGGAAATACAGATTGAGAAGACAACTCCAAGTTTCCAAAACCTCTCCCGAATCGATATATGTGTTTGCTATCGTCTTAAA GATTTGACGTGGCTGGTGTTTGCTCCAAACCTTGTTGATCTTAGAGTTAAATACTCAAATCAATTGGAAGAGATTATAAG CAAGGAAAAGGCAGCAAGTGTTACAGGAGGACATGTTCCTTTTCAAAAACTAAGAAGCCTCTACTTATGTCATTCACCTA TGTTGAAGAGCATCTGCTGGAGTCCTTCGTCTTTTCCATGTTTAAGCAGAATAAGCATTGCAGGTTGTCCGATGCTGAGA AAGCTTCCACTGGATTCTAATAGTATCGTCAGGTTTGAAGTATTTTTCATAGATTACAGAGAGGAAGGGTGGATCAAAGA GGTTGAATGGGAAGACGAAGCCACTCAACTACGTTTCTTGCCTTTGTGTAAGCTTGGCACCGACCCGACAATGACTCCAA GTAAATATGATAGCCATACTCAATCGATAAACAGTGTAGTTGTTCTAAGGCATCAGCCCAGTTAA |
| AA seq | Len:875 aa MGSCLSVSMPCDQAVNQVSQCLSVNGSYIYNLSKNLEALHKEMEVLKAKRDDVQARVSREEFTRRRKMLAQVQVWLKNVL DIEDEFKDLVSTSTAEVQRLCCCGLCSKNVEMSYRYGKRVIRMWKRVKSTSSQGDFDLVTEEVHVTEVEEMPIQPTIVGH EALLERVWNRLMDDGVGVLGLYGMGGVGKTTLLAQINNMFTKARGSFDIVIWVVVSKSLDILKIQEDIAKKIGLWNEEWD KENENRRALDIHNVLKRRKFVLFLDDIWAKVNLSTVGVPYPDVVNGCKVAFTTRSRGVCGRMEVDELIEVSCLGPDKSWE LFQKKVGESTLKIHADIHHLARQVSGKCSGLPLALNVIGETMSCKSTVQEWRHAMDVLTLSAADFSSMKDEIFHILKYSY DSLNGEVVKSCFLYCSLFPEDYLIEKERLVDYWICEGFIDESQGRERAMNEVYEILGTLVRASSDLGKNKEIFIVQAGVD LRNMPYVKNWKGVKKMSLMRNNIERICGSLECAQLTTLFLQKNQPLVHVCSDFFMYVPMLLVLDLSGNLGLSELPLIHLV SLRYLDLSRTSLRRLHVGLQEMKKLIHLNLESTRKLVSISGISNLPSLRSLRLQGSNKTLDMSLLKELQLVEHLENLTIE VSSGMVLEQLLSSHMLVKCIQKVRFNNLGESTKVLTLPTMCVLRRLNVSGCRMGEIQIEKTTPSFQNLSRIDICVCYRLK DLTWLVFAPNLVDLRVKYSNQLEEIISKEKAASVTGGHVPFQKLRSLYLCHSPMLKSICWSPSSFPCLSRISIAGCPMLR KLPLDSNSIVRFEVFFIDYREEGWIKEVEWEDEATQLRFLPLCKLGTDPTMTPSKYDSHTQSINSVVVLRHQPS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | probable disease resistance protein At1g12280; K13459 disease resistance protein RPS2 (A) |