Names & Information
Knowledge of BnaC08G0311800ZS:
| Gene Name | BnaC08G0311800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC08g22370D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=1 SV=2 |
| NT seq | Len:3996 nt ATGAGTTCCTCTGAGACATCTCACCTAGCCACCGCCAAAACAGCTCTCACGGCGGTTGCATCGGTGGCTGCAGCCGCAAT GCTCGCTCGAACAGTGATCCAAGACTACATGCCAGCGGAGGTGCATGACTTCATCTCTTGTGGTATCCGCAAATGCTTCA GCTACTACGGTTTTCAAATGACAGTTGTGATTGAAGAGTTTGGAGGCTTTGAAAACAACCAAGTGTTTGAAGCCGCAGAG GCTTACCTAGCCTCCAAGATATCTCCTTCCACTAGAAGGATCAAAGTCAACAAACTTGAGAAACAGAGCAACTTCAGCGT CACGGTCGAACGCGACGAGGAAGTTGTGGACACTTTCGACGGCGTCAAGCTGAGCTGGGTCCTCGTGTGCCGTTCCGTGA AGAAGAAGGATTTTCGTAACCCTCGAGACCTGAACTCTACTTTGAAGTCAGAGGTGCGTTCTTACGAGCTCAGGTTCAAC AAGAAGTTCAAGAAGATGGTTCTTGAATCTTATTTACCGTTTGTGGTGGAACAAGCTGCTCTGATAAAGCAAAAGACTAA AACGCTTAAGATCTTTACACTTGGTTCGTATTCCGATTGGACCTCTGTGACTCTCGACCATCCTTCCACGTTTCAAACTC TTGCCATGGATCCCGAGGAAAAGAAGAACTTGGTAGAGGATCTTGATTGTTTTGTGCAGCGTAAAAGCTTTTACGGGAGA GTAGGGAAAGCTTGGAAGAGAGGGTACTTGTTGTATGGTCCACCTGGTACAGGAAAGTCGAGCTTGATCGCAGCCATAGC TAATCATCTTAACTTTGATATCTATGACTTGGACTTGGCATCGGTTAAGAGTAATGCTGAGCTGCGTATGTTACTGATGT CTACTGCAAACCGTTCGGTTTTGGTTGTAGAAGATATTGATTGTTCCATCGAGTTTAAGGATCGGACTACTGATGAGCCT AGTGATCTTCTGGATAAACCGGTCACACTGTCTGGTCTATTGAATTTTGTGGACGGACTATGGTCAAGTTGTGGTAACGA GCGGATCATAGTGTTCACGACTAACTACAGAGAAAGACTGGATCCGGCATTGTTGAGGCCAGGACGTATGGACGTGCACA TTCACATGTCTTATTGCACACCCGCTGGTTTTAAGGTTTTGGCTTCAAACTATCTTGAGGTTGAAGATCATAAGCTTTTC GAGGAGATTGAGGAACTTATCCGGGAAATAAAAGTTACACCAGCAGAAATAGCTGAACAGTTGATGAGGAACGACTCTGT GGATCAAATACTCCATGGATTGATCGTGTTCTTAAGAGCAAAGAAATTTGAAAATGATGAAAGTCGAACCAAAAGACAAA GATCAAAACATCACGAGCTTCAGATCCTTGTCTGTTCACACTCCCTCCCTTTTGCAGAGATGGTGGACGCTGTGGTGACA GTATGTCTCGAAAAAGCCTTGAACATCCTCGAAGAAAAAGCCCGAGTTGTGTCTGAATACAACAAACAGCTGAAAGATTT GCAAGACGAGTTGCAGTATATGCAGTCCTTTCTCAAAGACGCAGAGAGGCGTAAGAGGACGAACGACGTCTTGCGCAGGC TCGTGTCAGACCTACGAGAACTGGTCTACGAAGCTGAGGACATACTCGTGGACTGTCAGCTCGCTGATGGTAACGAAGCT GAGGACGACAACAACAACAACGAGCAAAGACCATCAAACGCGTGGCTTTCACGGCTCTATCCCGCTCGTGTTTCGCTTCA GTACAAGAAAAGCAAACGACTCAAAGAGATCAACGAGAAGATAACATCCATTAAGACTAAAGTCGAGCCATACTTCAAGT TCAGGACGCCGAGTAATGTGGGGAGAGATAACGGAACTGATCGTTGGAGCTCTCCTGTGTATGACCATACTCAAGTGGTT GGTCTTGAAGGAGACAAAAGAAAGATCAAAGAGTGGCTCTTTAACTCAAAAGACAGCGAGTTGCTGATGATGGCCTTTGT AGGAATGGGAGGGCTAGGTAAGACCACTATAGCTCAAGAAGTGTTCAACGACAAGGAGATAGAGAACTGTTTCGAAAGAA GGATATGGGTCTCTGTCTCCCAAACCTTCACCGAAGAACAGATCATGAGAAGCATATTGCGTAACTTGGGCGACGCAAGC GTTGGAGATGATCTCGGAACACTGCTGAGGAAAATCCAGCAGTATCTTATGGGGAAACGGTACTTGATCGTGATGGACGA TGTTTGGGACAAGAACTTGAGTTGGTGGGACAAGATTCACCAAGGACTGCCTAGAGGACAAGGTGGCAGCGTTATTGTCA CCACAAGATCAGAATCTGTGGCGGTTAAGGTTCAGGCGAGGGACAAGACTCACCGTCCAGAGCTGCTTAGTGCTGACAAC AGCTGGCTGCTGTTTTGTAAAGTGGCCTTTGCGGCTAACAATGGTGTGTGTGAGCGTTCTGAGCTTGAGGATGTTGGTAA GGAGATTGTAACCAAGTGCAAAGGCTTGCCTTTGACGATCAAAGCCGTTGGTGGTTTGCTTCTGTGTAAGGATCACGTCT ATCATGAGTGGAAACGAATCTCAGAGTATTTTCAGGATGAACTGAGAGGAAACACTTCTGAAACCGACAACGTGATGTCT TCTCTTCAGTTGAGCTATGATGAACTCCCTTCTCATCTCAAATCATGTTTCCTCACGCTCTCGCTCTATCCAGAAGACTG TGTTATACCAAAACAGCAGCTAGTACATGGATGGATCGGAGAAGGGTTTGTCATGTTGAGAAACGGAAGATCTGCGACTG AGTCAGGAGAAGACTGCTTCTCAGGACTCACCAACAGGTGTTTAGTTGAAGTTGTTGACAAGACATATAGTGGAACCATT GTTACTTGCAAGATTCATGACATGGTTCGTGATTTGGTTATCGATATAGCAAAGAATGATTCCTTCTCTAACTCTGAAGG CCTCAACTGTCGTCACATTGGGATTAGTGGGAACTTTGAGGAGAAGCAGGTCAGAGTTAACCATAGACTAAGAGGCTTAG TGTCAACAACCAAGACAGGTGAAGTGAACAAGCTTAACTCAGAGCTAGCTAAGAAGTTCACTGACTGCAAGTATCTGCGG GTTCTCGACATCTCCAAATCAATATTTGATGCTCCTCTGTCTGATATTTTGGATGAGATTGCGAGCCTTAAGCACTTGGC GTGTCTTAGCATGAGCAACACGCATCCATTGATCCAGCTTCCTCGTTCCATGGAAGATCTCCAGAATCTTCAGATTCTAG ACGCTAGCTACTGTCAGAACCTGAAACAGCTGCAACCTTGCATTGTCTTGTTCAAGAAACTCCTTGTGCTTGACATGACA AACTGTGGATCACTTGAGTACTTCCCCAAGGGAATAGGAAGTCTCGGGAACCTCGAAGTGCTGTTGGGGTTTAAGCCGTC CATGTCAAGCAATGGGTGCAAGCTCAGTGAAGTCAGGAACCTCACAAACCTCAGGAAACTTGGTCTTTCTCTGACTCGTG GCGACCAGATAGAAGAAGATGAGCTCGACTCTTTGGTAAACTTATCCAAGCTTATGTTACTCTCAATCAACTGCTATGAT AGCTACGGTGACGATCTGATAACCAAGATAGATGCTCTCACTCCTCCACACCAGCTCCATGAGCTTTCTCTAGAGTTCTA TCCTGGAAAGCTGAGTCCCTCGTGGTTGAGTCCTAAAAGGCTTCCGATGTTGAGGTACATGTCGATATGCTCAGGTAATT TGACGAAAATGCATCAAAGATTCTGGGAAACTGAGACTAACACTCACTGGAGAATCGAAGCTTTGATGTTTCATTCCTTG TCGGAACTGGACATGGATTGGGAGGAGCTTCAACTGTCAATGCCGTACCTTAGGACAGTGCACGCAAACTGGTGTCCGGA GCTAGAGACTTTCCCGATCGAAGATGTTGGCTTTAGAGGAGGGGTGTGGACGAAAACACCAACACACAGGACCTGA |
| AA seq | Len:1332 aa MSSSETSHLATAKTALTAVASVAAAAMLARTVIQDYMPAEVHDFISCGIRKCFSYYGFQMTVVIEEFGGFENNQVFEAAE AYLASKISPSTRRIKVNKLEKQSNFSVTVERDEEVVDTFDGVKLSWVLVCRSVKKKDFRNPRDLNSTLKSEVRSYELRFN KKFKKMVLESYLPFVVEQAALIKQKTKTLKIFTLGSYSDWTSVTLDHPSTFQTLAMDPEEKKNLVEDLDCFVQRKSFYGR VGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDLDLASVKSNAELRMLLMSTANRSVLVVEDIDCSIEFKDRTTDEP SDLLDKPVTLSGLLNFVDGLWSSCGNERIIVFTTNYRERLDPALLRPGRMDVHIHMSYCTPAGFKVLASNYLEVEDHKLF EEIEELIREIKVTPAEIAEQLMRNDSVDQILHGLIVFLRAKKFENDESRTKRQRSKHHELQILVCSHSLPFAEMVDAVVT VCLEKALNILEEKARVVSEYNKQLKDLQDELQYMQSFLKDAERRKRTNDVLRRLVSDLRELVYEAEDILVDCQLADGNEA EDDNNNNEQRPSNAWLSRLYPARVSLQYKKSKRLKEINEKITSIKTKVEPYFKFRTPSNVGRDNGTDRWSSPVYDHTQVV GLEGDKRKIKEWLFNSKDSELLMMAFVGMGGLGKTTIAQEVFNDKEIENCFERRIWVSVSQTFTEEQIMRSILRNLGDAS VGDDLGTLLRKIQQYLMGKRYLIVMDDVWDKNLSWWDKIHQGLPRGQGGSVIVTTRSESVAVKVQARDKTHRPELLSADN SWLLFCKVAFAANNGVCERSELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWKRISEYFQDELRGNTSETDNVMS SLQLSYDELPSHLKSCFLTLSLYPEDCVIPKQQLVHGWIGEGFVMLRNGRSATESGEDCFSGLTNRCLVEVVDKTYSGTI VTCKIHDMVRDLVIDIAKNDSFSNSEGLNCRHIGISGNFEEKQVRVNHRLRGLVSTTKTGEVNKLNSELAKKFTDCKYLR VLDISKSIFDAPLSDILDEIASLKHLACLSMSNTHPLIQLPRSMEDLQNLQILDASYCQNLKQLQPCIVLFKKLLVLDMT NCGSLEYFPKGIGSLGNLEVLLGFKPSMSSNGCKLSEVRNLTNLRKLGLSLTRGDQIEEDELDSLVNLSKLMLLSINCYD SYGDDLITKIDALTPPHQLHELSLEFYPGKLSPSWLSPKRLPMLRYMSICSGNLTKMHQRFWETETNTHWRIEALMFHSL SELDMDWEELQLSMPYLRTVHANWCPELETFPIEDVGFRGGVWTKTPTHRT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | ATPase family associated with various cellular activities (AAA) |
| KEGG | probable mitochondrial chaperone BCS1-B; K08900 mitochondrial chaperone BCS1 (A) |