Names & Information
Knowledge of BnaC08G0313300GG:
| Gene Name | BnaC08G0313300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC08g28290D [Brassica napus] |
| Best Hit (SwissProt) | TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1 |
| NT seq | Len:2388 nt ATGGAAGGAAGCTTTAACACAAGTTGCAAACCTGTCTGGTTTTGTCACGGGAAACTACAGGTCACTTCTTTCTTCTCACC TGTTTCGGATGAAGCAAAGTTGATCGACGATGTAACTAAAGAAGTTGGGAAAATGTTGTCTGTTTCATACTTGCCTTTAC CAACATATGCCGTTGGGGTTCGATCACGTTTACACCGTATGAATGAGCTAATGTGCTTTGGTTCGGATGACGTTCAAGTC ATTGGGATCAGCGGAATGGGTGGGATTGGTAAAACAACGCTGGCCAAGGCTGCATTTAATAAATTCTCAGATCGTTTTGA AGGAACAAGTTTCCTAGAAAACTTTGGAGATTGCTGCAAGAAACCTGAAGGGAAGGTTCATCTTCAGCGAAAACTTCTTT CTGATATCTCAAGAAGGGATGACATACTGTTCAACATGGAAGACGCCATGGAAAAAAGATTCCGCAATAAAAGAGTATTA GTTGTTATTGATGATCTTGAAGACCTGACGCAACTTAATTCAGTCGCAATAGATTTGAGCTGCTTTGGTCCAGGAAGCAG GATCATCTTCAGAGCAAGTGAGCCTCCTGAAGCGTTTCTACAGCTCTCAGAAAAGTTGGTTGAATACTGTGGAGGACTAC CCTTGGCTATGGAAGTCTTGGGTGCGTCCCTCTTCAAGAGAAGCATTTCAGAGTGGGAAACCACGTTGCAACGGCTGAAG AATATACCCGAAGATAACATTCAAGCAAAGCTTAAGATCAGCTTTGATGGGCTAAGTCAAGTGCAGAAAGATATATTCTT GGATCTTTCTTGCTTCTTCATCGGGATGGAGAAAGACTATGTAAGTTGCATATTGGATGGATGCAAGCTATATCCTGAGA TAGGACTCAGTGTGCTAAAGGAGAGGTGCCTCATTACAGTCCGGGATAACAAGATAGTGATGCATAATTTATTACGAGAC ATGGGAAGAGATATTTCGCGGAACAACTGTGGAAAATTGAGTAGATTGTGGGATCCTGATGATGCTCGTTATGTCTTGGC AAACGACTATGTAAATGTAAGGAACAAATCCCTACGCACTCTCTGTCTCGACCGAAAAATTATGTACGATGGCTTTACTG GCTTGGGTGTCTCTGTGCCAATAAACTTACATTTGAGAAATTTAGTTGTCATGGATATGCAGTACAGCAACCTCAAACGA CTTTGGGATAATCAAGAGCCACAGTTCCTTGAGCATCTAAAACACATCAATCTCAGTCATTCTGTCCACCTCACAGAGAC TCCAAACTTCTCTTATCTCCCAAACCTCGAGAAGCTGGCCTTGGTTGCACTGGAACTCGGAGACCTCCCTTCGGAACTCT ATACATTGAAGGCACTGGAAACACTAATTCTTTCAGGCTGCACGAAACTTGAGAGATTGGACGATGCTTTAGGTGCAATG GAATCCTTGAGAGTTCTTAAAGCTGCTCTATCGCTATTTCCCTCTTCGGGTGATCAACTGAAAAACCTGGAAGAATTATC TCTTGATGGCTGCAAAGGATTATGGAAAGGCAAAAGCCCTCTAGCTGCTGTATCTCTTCCATTTTCGTTTAACCGTTTAG GCTGCCTGAAGACTTTGAGTTTAGGCTTCTGTGGTCTATCAGATGAGTTGGTTCCTGTAAATCTTCGGAGCATGTCTTGT CTCGAGGAACTTGATCTACGAGGCAACAACTTTCGTAACCTGAAGACGGATTTTGCTGGTCTTTTGAGTCTACTGGTCCT GAAATTGGATAGCTGCTTTGAACTTCAATCCATGTTTTGTTTACCAAAAACGTTGAGATCTTTCTATGCGAACTACTGCA TCATGTTGGAAAGAACTCCAGATTTATCAGAATGTGTGGCGTTACAAGCGTTGTACCTCACAAATTGTTTAAGCCTTGTT GAGACGCCGAGTCTGGATAAACTGAAAAGGGTTGGAGTCATCCACATGGAAATGTGCAAGCGCATTCCACATACTTATAT AGAAAGAATCATGCAGGGCTGGGCTGTGAATGCCAATGGGGGAATATTTATCCCCGGGTGTAGTCTTCCAGACTGGCAAA ACAACCAGATGTCTGAATATTCTCCAAAGATCACACTGAAGAATCAAACCAAAGGAACCGTATGGAGTCGCAAGCCAGCC ACAGATCAGATTCGTATGTACCATGAACGACACATCTGGCAAGGACACTTTTTAAATGAAGATTTCAACTTAGAAACGGG CGATCAAATAGAAGTTGCTGTGGATTTTGGGGATCAACTCACCATTCTTGGGACAGGACTACGTCTTGCTTACAATGGGC ATGATCAATCAGTGGCTAGAGTTTCACATGAGAAGAAATCAAAATTCCATCTACGTAGCAGGCTATGA |
| AA seq | Len:796 aa MEGSFNTSCKPVWFCHGKLQVTSFFSPVSDEAKLIDDVTKEVGKMLSVSYLPLPTYAVGVRSRLHRMNELMCFGSDDVQV IGISGMGGIGKTTLAKAAFNKFSDRFEGTSFLENFGDCCKKPEGKVHLQRKLLSDISRRDDILFNMEDAMEKRFRNKRVL VVIDDLEDLTQLNSVAIDLSCFGPGSRIIFRASEPPEAFLQLSEKLVEYCGGLPLAMEVLGASLFKRSISEWETTLQRLK NIPEDNIQAKLKISFDGLSQVQKDIFLDLSCFFIGMEKDYVSCILDGCKLYPEIGLSVLKERCLITVRDNKIVMHNLLRD MGRDISRNNCGKLSRLWDPDDARYVLANDYVNVRNKSLRTLCLDRKIMYDGFTGLGVSVPINLHLRNLVVMDMQYSNLKR LWDNQEPQFLEHLKHINLSHSVHLTETPNFSYLPNLEKLALVALELGDLPSELYTLKALETLILSGCTKLERLDDALGAM ESLRVLKAALSLFPSSGDQLKNLEELSLDGCKGLWKGKSPLAAVSLPFSFNRLGCLKTLSLGFCGLSDELVPVNLRSMSC LEELDLRGNNFRNLKTDFAGLLSLLVLKLDSCFELQSMFCLPKTLRSFYANYCIMLERTPDLSECVALQALYLTNCLSLV ETPSLDKLKRVGVIHMEMCKRIPHTYIERIMQGWAVNANGGIFIPGCSLPDWQNNQMSEYSPKITLKNQTKGTVWSRKPA TDQIRMYHERHIWQGHFLNEDFNLETGDQIEVAVDFGDQLTILGTGLRLAYNGHDQSVARVSHEKKSKFHLRSRL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |