Names & Information
Knowledge of BnaC08G0317600ZS:
| Gene Name | BnaC08G0317600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC08g22900D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3594 nt ATGGTATCTTTTGAAGCTGTTTGCAGTTCTCCAAATCTAACACAACAAGTTCAGAGAGATGCACGAGGGAAGGCAGTTCT TGAATGCTGGTGCCACCAAGTCTTCGTTAGCCATCTGACAAGTGCATTGCTCAGAGATGGGGTCAACATCTTCATTGACA CGAATGAGGAAAAAGGAAAATCTTTAAATGTGCTTTTCGAGAGGATTGAAGAGTCGAGGATCGCCTTGGCTCTCTTTTCT GTGAGGTACACCGAGTCAAAATGGTGCCTGAACGAACTTGTGAAGATGAAAGAATGCATGGACAAAGGTCAACTCCTCAT CATTCCCATCTTTTACAAGGTTCAAGCATACGAAGTTCGGTTTCAGAGGGGACGGTTCGGTTATTTGTTCAACAAGTTGC GCCATGTTGACGTTGACAAGAAGAAGCAGTGGTCTGAAGCTTTGAACTCTGTCGCTGACCGAATAGGCTTCTGCTTCGAC GGAAAGAGCGACGAAAACAAGTTCATCGACAGTATCGTCGAAAAGGTTAAGCAAGCGCTGAGCAAAATTCAGTTGGATGA AAGCAAAGGCAACTCTGTTTTTCTTTCAAAAAACACTTCGTTGCGCTTAGGAAGAGAAAACAATGAGATTTATGGACTCA AGCAACGCTTGGACGAATTGGAGGAGAAGGAGTTATATGAAACTTGGCAGTGCAAATTCGTAAGCCACGTGTTAATACAA GATATTCGTAGAACTTCCAAGGAGCTCGGGTTGGATTGCTTGCCTGCATTACTCTTGAAAGAATTACTCGGTGTAAGAAA TTCAGACGTAAAATCTTCTCAAGGCGCCTACGAATCCTACAAGAGTGAACTACTCAAACATAAAGTTCTCGTTGTTCTCG ACGATGTGAGTGACAGAAAGCAGATAGAGGTTCTTCTGGGGAGATGCTACTGGATTAGGCAGGGAAGTAGAATTGTCATT TCAACAAGCGACAAGTCACTGATCCAAGATGTTGTCGACTATACTTATGTTGTCCCACAGTTAAACCACAAAGACGGACT AGGTCACTTTGGGCGTTATGCCTTTGACCATCATTCCAGCAAACACAACAATGAAGTCATCATGAAGCTATCAAAAGAGT TTGTGCATTATGTTAGAGGTCATCCGCTAGCTCTTAAGTTGTTGGGCGCAGATCTTAATGGGAAAGACGAGGGCTATTGG AAAACAATACTGGCAACACTCTCCCAAAGTTCCTGCCCGTGTATTCGAGATGTGTTGGAAGAAAGCTATAATGAGTTGAG TCAAGAGCACAAAGAGATATTTCTCGACATGGCTTGTTTTAGAAAGGAAGATGAGAGTTACGTTGCAAGTTTACTGGATA CATCTGAAGCCGCAAGAGAAATAAAAACTCTCATGAACAAATTCATGATAGATGTTTCTGATGGGCGAGTAGAGATGCAT GATATACTATATACCTTCGCCAAGGAGATTTGCCGAAGAGCACATGCTCAAGATGGAAAGGGGGGACATAGGTTGTGGCA TCACCAAGACATCATTGATGTACTACAGAACATAGAGGAAGGCGAGAATGTTAGAGGGATTTTCCTAAACATGAATGAAA TGAAGAGGGAGATGAGCTTAGACAGTTCCACCTTTGAACCAATGCACGATCTCAGATACCTCAAGATCTATAGCTCAGGT TGTCCTCAGCAATGTAGACCTAACAATAAGATAAGCCTCCCTGATGGACTAAACTTTCCTCTGAAAGAGGTTCGCTACCT CCACTGGCGGGAGTTCCCATTGAAAGAACTTCCACCAGATTTCAACCCTTGCAATCTAGTGGACCTTAAGCTTCCTTACA GCAAGATTGAACGGATCTGGAGTGATGATAAGGATACATCAAAATTGAAGTGGGTGGATCTCAACCATGCCAGTAACTTG CGCTTCTTGTCAGGCTTATCAAAGGCTCGAAATCTGCAAAGATTGAACCTTGAAGGCTGCACCAAAATGGAAACTTTACC CCATGATATGCAACATATGAGAAGTCTTCTTTTCCTGAACCTGAAAGGGTGCACAAGTCTCAACTCTCTTCCGGAAATAA GTTTGGTCTCACTAGAAACTCTCATCCTCAGCAACTGCTCAAACCTGAAGGAATTCCGGGTGATCTCACAAAATCTAGAA GCTCTATACTTGGATGGCACTTCAGTAAAAAAACTCCCTCTGGATATCAAAATACTGAAGAGACTTGCCTTGTTGAATAT GAAAGGATGCACGAAGCTGAAGGAATTTCCTGATTGTCTTGATGACTTGAAAGCTCTCAAGGAATTGATACTCTCAGATT GCTCGAAGCTCCAACATTTTCCTGCAAACGGCGAAAGCATCAAGGTTTTAGAGACATTGCGATTGGATGCGACAGGCTTA ACTGAGATTCCGAAGATATCCTCCTTACAGTGTTTATGCTTAAGCAAGAATGATCAGATCATCTCCCTTCCAGATAACAT CAGTCAACTCTATCAACTAAAATGGTTGGACTTGAAGTATTGCAAGAGTCTTACATCTATTCCAAAGCTTCCACCAAATC TTCAGCACTTTGATGCACATGGCTGTTGCTCACTTAAAACAGTCTCGAATCCACTGGCATGTCTTACGACAACTCAACAG ATCTGCTCCACGTTCATATTCACGAACTGCAACAAACTCGAGATGAGTGCGAAGAAAGATATATCTTCCTTTGCTCAAAG GAAATGCCAGCTGCTTTCAGATGCACAAAACTGCTGCAATGTTTCGGATTTGGAGCCTTTGTTCAGTACTTGCTTTCCTG GAAGTGAACTACCTTCATGGTTAGGTCATGAAGCCGTTGGATGTATGTTAGAGCTCAGAATGCCCCCACATTGGCGCGAA AATAAGCTTGCCGGTCTAGCTTTATGTGCTGTTGTCTCATTTCCAAACTCCCAGGTACAAATGAAGTGTTTTTCGGTGAA ATGCACATTGAAGTTAGAAGTAAAAGAAGGGTCGTGGATCGACTTTTCTTTCCCAGTTGGAAGTTGGAGAAATCAGGACA ATGTTGTAGAGAATACTGCATCACCAGAGCATGTCTTTATTGTTTATATCAGCTGTTCAAAGATCTTTAAACGTCTTGAA AGCCAGCATTTTATCAGCTCTGATCCTACGAAGTCCACTCTATCTAGTAAATGTAGTCCTACCAAGGCCTCCTTTAAATT CACGGTCACAGATGGTACGAGCGAGATACCGGGGCTCGAAGTGCTCAAGTGTGGCTTAAGGTTTTTTATAGGTGGTGAGA GCAGTGGAGAGTGTTTAAAGAAGTTGGAAGTGAAGGATGCTGAACAGAATCTAAGTGCACAAAAGTTATCAGATAACTGG ACGAGTGAATCAGTAACCACTACTGAGGTTGCTGTTTTGCCTGAAAATGCAAACAGTGCAGAACAGAGCCCAGAGACGGC TACAACAGCGGTTACGGCTTCACCAGAAAAAGCTAACAGTGCAGAATTTCAAATGGAAATCTCCACAACCCCACGTGAAG GTCAACCACCCCCATGTATAAAAACTTCGAAATGGGTATGCTTTGCTTGTTTTGACTTGAGAAAACATCTATGA |
| AA seq | Len:1198 aa MVSFEAVCSSPNLTQQVQRDARGKAVLECWCHQVFVSHLTSALLRDGVNIFIDTNEEKGKSLNVLFERIEESRIALALFS VRYTESKWCLNELVKMKECMDKGQLLIIPIFYKVQAYEVRFQRGRFGYLFNKLRHVDVDKKKQWSEALNSVADRIGFCFD GKSDENKFIDSIVEKVKQALSKIQLDESKGNSVFLSKNTSLRLGRENNEIYGLKQRLDELEEKELYETWQCKFVSHVLIQ DIRRTSKELGLDCLPALLLKELLGVRNSDVKSSQGAYESYKSELLKHKVLVVLDDVSDRKQIEVLLGRCYWIRQGSRIVI STSDKSLIQDVVDYTYVVPQLNHKDGLGHFGRYAFDHHSSKHNNEVIMKLSKEFVHYVRGHPLALKLLGADLNGKDEGYW KTILATLSQSSCPCIRDVLEESYNELSQEHKEIFLDMACFRKEDESYVASLLDTSEAAREIKTLMNKFMIDVSDGRVEMH DILYTFAKEICRRAHAQDGKGGHRLWHHQDIIDVLQNIEEGENVRGIFLNMNEMKREMSLDSSTFEPMHDLRYLKIYSSG CPQQCRPNNKISLPDGLNFPLKEVRYLHWREFPLKELPPDFNPCNLVDLKLPYSKIERIWSDDKDTSKLKWVDLNHASNL RFLSGLSKARNLQRLNLEGCTKMETLPHDMQHMRSLLFLNLKGCTSLNSLPEISLVSLETLILSNCSNLKEFRVISQNLE ALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQHFPANGESIKVLETLRLDATGL TEIPKISSLQCLCLSKNDQIISLPDNISQLYQLKWLDLKYCKSLTSIPKLPPNLQHFDAHGCCSLKTVSNPLACLTTTQQ ICSTFIFTNCNKLEMSAKKDISSFAQRKCQLLSDAQNCCNVSDLEPLFSTCFPGSELPSWLGHEAVGCMLELRMPPHWRE NKLAGLALCAVVSFPNSQVQMKCFSVKCTLKLEVKEGSWIDFSFPVGSWRNQDNVVENTASPEHVFIVYISCSKIFKRLE SQHFISSDPTKSTLSSKCSPTKASFKFTVTDGTSEIPGLEVLKCGLRFFIGGESSGECLKKLEVKDAEQNLSAQKLSDNW TSESVTTTEVAVLPENANSAEQSPETATTAVTASPEKANSAEFQMEISTTPREGQPPPCIKTSKWVCFACFDLRKHL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |