Names & Information
Knowledge of BnaC08G0327400ZY:
| Gene Name | BnaC08G0327400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC08g28290D [Brassica napus] |
| Best Hit (SwissProt) | TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1 |
| NT seq | Len:3000 nt ATGGGTGAAGGCAGGAAACGAGATCGGGAGCGATGGAGCCACGATGTGTTTATCAATTTCCGTGGGGAACTTCGAGATAA TTTTGTAAGCCATTTGGAGAAGGCTTTCAAAAGTAATGGGATACACATATTCAAGGACGATGATGCACTAAAAGCAGCAG AAAAGATCAACACAGAGCTCTCGAAGGCAATTAAAACCTCCAAAGTTCACCTTGTCCTTTTATCCAAGACGTATGCTCAT TCATCTTGGTGCTTGGATGAACTTGCGGAAATTTTTGAATGCAGCAAAAAGGATGCCGGACATATGGTAGTCCCAGTTTT CTACAAGGTTGACCCATCCGATGTACGCAGACAAAAAGGATCATTTGGTGAACCCTTTGAGAAACACAAAAGCCGTCACC CAGGGAGCAAGTTGCAGAAATGGAAGGAAGCTTTAACACAAGTTGCAAACCTGTCTGGTTTTGTCACGGGAAACTACAGG GATGAAGCAAAGTTGATCGACGATGTAACTAAAGAAGTTGGGAAAATGTTGTCTGTTTCATACTTGCCTTTACCAACATA TGCCGTTGGGGTTCGATCACGTTTACACCGTATGAATGAGCTAATGTGCTTTGGTTCGGATGATGTTCAAGTCATTGGGA TCAGCGGAATGGGTGGGATTGGTAAAACAACGCTGGCCAAGGCTGCATTTAATAAATTCTCAGATCGTTTTGAAGGAACA AGTTTCCTAGAAAACTTTGGAGATTGCTGCAAGAAACCTGAAGGGAAGGTTCATCTTCAGCGAAAACTTCTTTCTGATAT CTCAAGAAGGGATGACATACTGTTCAACATGGAAGACGCCATGGAAAAAAGATTCCGCAATAAAAGAGTATTAGTTGTTA TTGATGATCTTGAAGACCTGACGCAACTTAATTCAGTCGCAATAGATTTGAGCTGCTTTGGTCCAGGAAGCAGGATCATC CTCCTCAGTTGGCATGCCTTCAGAGCAAGTGAGCCTCCTGAAGCGTTTCTACAGCTCTCAGAAAAGTTGGTTGAATACTG TGGAGGACTACCCTTGGCTATGGAAGTCTTGGGTGCGTCCCTCTTCAAGAGAAGCATTTCAGAGTGGGAAACCACGTTGC AACGGCTGAAGAATATACCCGAAGATAACATTCAAGCAAAGCTTAAGATCAGCTTTGATGGGCTAAGTCAAGTGCAGAAA GATATATTCTTGGATCTTTCTTGCTTCTTCATCGGGATGGAGAAAGACTATGTAAGTTGCATATTGGATGGATGCAAGCT ATATCCTGAGATAGGACTCAGTGTGCTAAAGGAGAGGTGCCTCATTACAGTCCGGGATAACAAGATAGTGATGCATAATT TATTACGAGACATGGGAAGAGATATTTCGCGGAACAAGTGTGGAAAATGGAGTAGATTGTGGGATCCTGATGATGCTCGT TATGTCTTGGCAAACGACTATGTAAATGGAACTGGTGCAACTAAAGGTCTCACCCTGAAGGTCGAAGATCCGGCTACTGA GATCTTGGAGGTAAAAGCATTTTCAAAATTACCAGGGCTGAAACTTTTACAACTCAGTAATGTATCGCTCAGCGGAAGCT ATGCACATTTTCCTAAAGATTTACGATGGCTTTACTGGCTTGGGTGTCCTTGGGACTCTGTGCCAATAAACTTACATTTG AGAAATTTAGTTGTCATGGATATGCAGTACAGCAACCTCAAACGACTTTGGGATAATCAAGAGCCGCAGTTCCTTGAGCA TCTAAAACACATCAATCTCAGTCATTCTGTCCACCTCACAGAGACTCCAAACTTCTCTTATCTCCCAAACCTCGAGAAGC TGGTCTTGGTAAATTGTAAAAGTTTGGTTCTGGTTCACAAGTCGATAGGGACTCTTCACAAAAAGCTGGTGCATTTAAAT CTTAAAGGTTGCACTGAACTCGGAGACCTCCCTTCGGAACTCTATACATTGAAGGCACTGGAAACACTAATTCTTTCAGG CTGCACGAAACTTGAGAGATTGGATGATGCTTTAGGTGCAATGGAATCCTTGAGAGTTCTTAAAGCTGACTATACCGCTC TATCGCTATTTCCCTCTTCGGGTGATCAACTGAAAAACCTGGAAGAATTATCTCTTGATGGCTGCAAAGGATTATGGAAA GGCAAAAGCCCTCTAGCTGCTGTATCTCTTCCATTTTCGTTTAACCGTTTAGGCTGCCTGAAGACTTTGAGTTTAGGCTT CTGTGGTCTATCAGATGAGTTGGTTCCTGTAAATCTTCGGAGCATGTCTTGTCTCGAGGAACTTGATCTACGAGGCAACA ACTTTCGTAACCTGAAGACGGATTTTGCTGGTCTTTTGAGTCTACTGGTCCTGAAATTGGATAGCTGCTTTGAACTTCAA TCCATGTTTAGTTTACCAAAAACGTTGAGATCTTTCTATGCGAACGACTGCATCATGTTGGAAAGAACTCCAGATTTATC AGAATGTGTGGCGTTACAAGCGTTGTACCTCACAAATTGTTTAAGCCTTGTTGAGACGCCGGGTCTGGATAAACTGAAAA GGGTTGGAGTCATCCACATGGAAATGTGCAAGCGCATTCCACATACTTATATAGAAAGAATCATGCAGGGCTGGGCTGTG AATGCCAATGGGGGAATATTTATCCCCGGGTGTAGTCTTCCAGACTGGCAAAACAACCAGATGTCTGAATATTCTCCAAA GATCACACTGAAGAATCAAACCAAAGGAACCGTATGGAGTCGCAAGCCAGCCACAGATCAGATTCGTATGTACCATGAAC GACACATCTGGCAAGGACACTTTTTAAATGAAGATTTCAACTTAGAAACGGGCGGTCAAATAGAAGTTGCTGTGGATTTT GGGGATCAACTCACCATTCTTGGGACAGGACTACGTCTTGCTTACAATGGGCATGATCAATCAGTGGCTAGAGTTTCACA TGAGAAGAAATCAAAATTCCATCTACGTAGCAGGCTATGA |
| AA seq | Len:1000 aa MGEGRKRDRERWSHDVFINFRGELRDNFVSHLEKAFKSNGIHIFKDDDALKAAEKINTELSKAIKTSKVHLVLLSKTYAH SSWCLDELAEIFECSKKDAGHMVVPVFYKVDPSDVRRQKGSFGEPFEKHKSRHPGSKLQKWKEALTQVANLSGFVTGNYR DEAKLIDDVTKEVGKMLSVSYLPLPTYAVGVRSRLHRMNELMCFGSDDVQVIGISGMGGIGKTTLAKAAFNKFSDRFEGT SFLENFGDCCKKPEGKVHLQRKLLSDISRRDDILFNMEDAMEKRFRNKRVLVVIDDLEDLTQLNSVAIDLSCFGPGSRII LLSWHAFRASEPPEAFLQLSEKLVEYCGGLPLAMEVLGASLFKRSISEWETTLQRLKNIPEDNIQAKLKISFDGLSQVQK DIFLDLSCFFIGMEKDYVSCILDGCKLYPEIGLSVLKERCLITVRDNKIVMHNLLRDMGRDISRNKCGKWSRLWDPDDAR YVLANDYVNGTGATKGLTLKVEDPATEILEVKAFSKLPGLKLLQLSNVSLSGSYAHFPKDLRWLYWLGCPWDSVPINLHL RNLVVMDMQYSNLKRLWDNQEPQFLEHLKHINLSHSVHLTETPNFSYLPNLEKLVLVNCKSLVLVHKSIGTLHKKLVHLN LKGCTELGDLPSELYTLKALETLILSGCTKLERLDDALGAMESLRVLKADYTALSLFPSSGDQLKNLEELSLDGCKGLWK GKSPLAAVSLPFSFNRLGCLKTLSLGFCGLSDELVPVNLRSMSCLEELDLRGNNFRNLKTDFAGLLSLLVLKLDSCFELQ SMFSLPKTLRSFYANDCIMLERTPDLSECVALQALYLTNCLSLVETPGLDKLKRVGVIHMEMCKRIPHTYIERIMQGWAV NANGGIFIPGCSLPDWQNNQMSEYSPKITLKNQTKGTVWSRKPATDQIRMYHERHIWQGHFLNEDFNLETGGQIEVAVDF GDQLTILGTGLRLAYNGHDQSVARVSHEKKSKFHLRSRL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |