Names & Information
Knowledge of BnaC08G0409500GG:
| Gene Name | BnaC08G0409500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1416 nt ATGCCATGGAATCAACCAGCTTCCACTCAAGTGCTCGAGGCAATTGAAAACTCCAAAATAGCGATCGTGGTCATATCGAA GAACTACACTGCTTCAGTCTCGTGCCTGGACGAACTGGCGAAGATAGTCGAGTGTGAGGAGAAACAGTCGCTGGTGATGA TTCCAGTCCTACACGAGGTGGATCCTTCAGATGTTCTAGGGCAAGCACACAATCTTGATGGAGATAAAAACAACAACTGG GAGACGGTGGAGAGATGGAGAAACGCACTGGCCAGTATGATTAAGACCTATCAACAACAAGTATACTCTCATTGGGAGGA TGGAGACTCAAGTGAGGATGGAGACACAGACGCTTTCATTATTTATAGAGTTATGCTCCAGGTTTCGAAACGTTTGAAAC CACCCCCGAAAATGGCAGAGGCTATATATTATTGTCACTGGACGATACCTGAAAAAACTGGATTTCTCACCAAGGGGATC ATGCTTGTTAGAGCTGCTTTCAGGAAGATAGCTGGGAGAATTATGTATGCAGAAAAGCTTATTAGTGTCGTCAACCCTAG TACGCCTGCAAGGAGCCCTGCGTACGTGCAAAAAGAGAAGTATGTTACGGGCAACGAGTTGTCTCAATTGGTTCCATCTA TTGATTTCGATAGCCTTGTTGGGATGGATCGGCAAATGAAAGCAGTGGACGCACTGCTGCTTAATATGGATTCCGAAGAA GACGGACTTGGAGAAATGGGCATTTGTGGTGGGGAAAGAGTTGGCAAAACAACACTTGCGAGATGTGTTTACCAAAAGAT CTCACCACAGTTTCAAGATCACTACTACTTTGAGTATGAAACCGCACACTCTTCTCTGGGAATTGGTTCAACCTGTTTGC TAGAGAAAATCGCAAGAGCTGGTCTATCGGCAAAAGTAGCTGTTAGACCAGGTGAAGTTGTCAAATTGGAGTTAGAGAGT TTCGATGAACTTGTGAATGCGAATCTTGGACATCGGAAGGTTTTGCTTATTGTAGATATCCATCTCTATGCCACTGGCCA ACTCGAAAATATCAGAAACAGTGCTCGTCGGTTTGGTCCAGGGAGTAGACTGATATATGTCACCCAGTCCAATCGTGTGC TACTCAAGTGTGGAGTCAAACACCTCTACAAAGTTGAGACTCTAAGATATGATGAAGCTCTTCAGCTCTTTTCACAATAT GCCTTCAAACAGGAACACGTCCCTAGGGAGTACTTCCGTCTCTCCATTCGTGCTGTCCTCATTACAGGTCGTATTCCACT GACCCTAAAAGTATTCGGCTCCTTCCTACGCGGGAAAACCGTCAGTGAATGGGAATCCGAGCTATGTAGACTTGAAGCAT CGCAGGATAACTGCGTTGCAAAAGTTTCTAGCTATATCGGAAATGCCTTCTCTTGA |
| AA seq | Len:472 aa MPWNQPASTQVLEAIENSKIAIVVISKNYTASVSCLDELAKIVECEEKQSLVMIPVLHEVDPSDVLGQAHNLDGDKNNNW ETVERWRNALASMIKTYQQQVYSHWEDGDSSEDGDTDAFIIYRVMLQVSKRLKPPPKMAEAIYYCHWTIPEKTGFLTKGI MLVRAAFRKIAGRIMYAEKLISVVNPSTPARSPAYVQKEKYVTGNELSQLVPSIDFDSLVGMDRQMKAVDALLLNMDSEE DGLGEMGICGGERVGKTTLARCVYQKISPQFQDHYYFEYETAHSSLGIGSTCLLEKIARAGLSAKVAVRPGEVVKLELES FDELVNANLGHRKVLLIVDIHLYATGQLENIRNSARRFGPGSRLIYVTQSNRVLLKCGVKHLYKVETLRYDEALQLFSQY AFKQEHVPREYFRLSIRAVLITGRIPLTLKVFGSFLRGKTVSEWESELCRLEASQDNCVAKVSSYIGNAFS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |