Names & Information
Knowledge of BnaC08G0422800ZY:
| Gene Name | BnaC08G0422800ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1530 nt ATGAAGTTCGATGTATTCCTCAGTTTCAGAGGAATCGACACCCGAAGAACTTTCGTTAGCCATCTTCTCCTTGCACTGTT TAAAAAGCAGTTCAAGACTTTCAGACAAGAAGAAGAGATGCCATGGAATCAACCAGCTTCCACTCAAGTGCTCGAGGCAA TTGAAAACTCCAAAATAGCGATCGTGGTCATATCGAAGAACTACACTGCTTCAGTCTCGTGCCTCGACGAACTGGCGAAG ATAGTCGAGTGTGAGGAGAAACAGTCGCTGGTGATGATTCCAGTCCTACACGAGGTGGATCCTTCAGATGTTCTAGGGCA AGCACACAATCTTGATGGAGATAAAAACAACAACTGGGAGACGGTGGAGAGATGGAGTAACGCACTGGCCAGTATGATTA AGACCTATCAACAAGTATACTCTCATTGGGAGGATGGAGACTCAAGTGAGGATGGAGACACAGACGCTTTCATTATTTTT AGAGTTATGCTCCAGGTTTCGAAACGTTTGAAACCACCCGAGAAAATGGCAGAGGCTATGTATTATTGTCACTGGACGAA ACCTGAAAAAACTGGATTTCTCACCAAGGGGATCATGCTTGTTAGAGCTGCTTTCAGGAAGATAGCTGGGAGAATTATGT ATGCAGAAAAGCTTATTAGTGTCGTCAACTCTAGTACGCCTGCAAGGAGCCCTGCGTACGTGCAAAAAGAGAAGTATGTT ACGGGCAACGAGTTGTCTCAATTGGTTCCATCTATTGATTTCGATAGCCTTGTTGGGATGGATCGGCAAATGAAAGCAGT GGACGCACTGCTGCTTAATATGGATTCCGAAGAAGACGGACTTGGAGAAATGGGCATTTGTGGTGGGGAAAGAGTTGGCA AAACAACACTTGCGAGATGTGTTTACCAAAAGATCTCACCACAGTTTCAAGATCACTACTACTTTGAGTATGAAACCGCA CACTCTTCTCTGGGAATTGGTTCAACCTGTTTGCTAGAGAAAATCGCAAGAGCTGGTCTATCGGCAAAAGTAGCTGTTAG ACCAGGTGAAGTTGTCAAATTGGAGTTAGAGAGTTTCGATGAACTTGTGAATGCGAATCTTGGACATCGGAAGGTTTTGC TTATTGTAGATATCCATCTCTATGCCACTGGCCAACTCGAAAATATCAGAAACAGTGCTCGTCGGTTTGGTCCAGGGAGT AGACTGATATATGTCACCCAGTCCAATCGTGTGCTACTCAAGTGTGGAGTCAAACACCTCTACAAAGTTGAGACTCTAAG ATATGATGAAGCTCTTCAGCTCTTTTCACAATATGCCTTCAAACAGGAACACGTCCCTAGGGAGTACTTCCGTCTCTCCA TTCGTGCTGTCCTCATTACAGGTCGTATTCCACTGACCCTAAAAGTATTCGGCTCCTTCCTACGCGGGAAAACCGTCAGT GAATGGGAATCCGAGCTATGTAGACTTGAAGCATCGCAGGATAACTGCGTTGCAAAAGTTTCTAGCTATATCGGAAATGC CTTCTCTTGA |
| AA seq | Len:510 aa MKFDVFLSFRGIDTRRTFVSHLLLALFKKQFKTFRQEEEMPWNQPASTQVLEAIENSKIAIVVISKNYTASVSCLDELAK IVECEEKQSLVMIPVLHEVDPSDVLGQAHNLDGDKNNNWETVERWSNALASMIKTYQQVYSHWEDGDSSEDGDTDAFIIF RVMLQVSKRLKPPEKMAEAMYYCHWTKPEKTGFLTKGIMLVRAAFRKIAGRIMYAEKLISVVNSSTPARSPAYVQKEKYV TGNELSQLVPSIDFDSLVGMDRQMKAVDALLLNMDSEEDGLGEMGICGGERVGKTTLARCVYQKISPQFQDHYYFEYETA HSSLGIGSTCLLEKIARAGLSAKVAVRPGEVVKLELESFDELVNANLGHRKVLLIVDIHLYATGQLENIRNSARRFGPGS RLIYVTQSNRVLLKCGVKHLYKVETLRYDEALQLFSQYAFKQEHVPREYFRLSIRAVLITGRIPLTLKVFGSFLRGKTVS EWESELCRLEASQDNCVAKVSSYIGNAFS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |