Names & Information
Knowledge of BnaC08G0441600GG:
| Gene Name | BnaC08G0441600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: disease resistance protein RFL1-like [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=3 SV=2 |
| NT seq | Len:2658 nt ATGGGAGGTGGTTTCTCTGTCTCATTGTCATGTGATCAAGTGGTGAATCAAGTCTTCCGATGTCTATGCCTCAAAGGAAG TTATGTCCACAACCTCCCCCAGAATCTAGCGTCACTGGAGAAAGCCATGGGAACTCTCACGGCTAAGAGAGATGATGTTC AAGGGAGGGTAGACAGAGAAGAGTTTACTGGACATCGTCGAAGGCTTGCTCAAGTCCAGGTATGGCTTACGAGTATCCTC ACAATGGAAAACCAATATAATGAGCTTCTTAATACTAGTGACGTTGAGCTTCAAAGGTTGTGTCTCTGTCGATTATGCTC TAAAAATGTGAAAAAGAGTTATCTTTATGGGAAAAGAGTTACGGGTATGTTGGAGGAAGTTAAGAGTCTTATCTCTCAAG GAGTATTTATTGAGGTGACTGATGCAACTTCTATAGCCGAGGGTGAAGAGTTGCCTATCCAACCGACGATAGTTGGTCAG GAAACAATGCTCGAAATGGTATGGAACCGCCTGATGAAAGATGAAGTTGGGATTGTAGGTCTGTATGGTATGGGTGGGGT TGGCAAAACCACCCTTCTCACGCAGATCAACAACAGGTTTTCTGAAAGAGGGGGTGGGTTTGATGCTGTGATATGGGTTG TGGTGTCTCAAAATGCAACAGTCCATAAGATTCAAGGGAGCATTGGTGAAAAGCTAGGCCTTGGGGGGAAAGAGTGGGAG GAGAAAAGTGAGATGAAGAGAGGCCAAGACATCCACAACGTTCTTAGGAAGAAGAAGTTTGTGTTATTGTTGGATGATAT ATGGGAGAAAGTGAATTTAAGTACGATAGGAGTCCCATATCCGAGCAAGGTAAATGGAAGCAAAGTAGTATTTACCACTC GCTCTCGAGATGTGTGTGGGCGCATGGGAGTTGATGACCCGATCGAAGTCTGTTGTCTGGACACGGACAAAGCCTGGGAT TTGTTCAAAAAGAAAGTCGGAGAACACACACTGGGAAGGCACCCAGACATTCCCGAACTAGCAAGGAAAGTCGCTGGTAA ATGCCGTGGCCTACCATTGGCACTCAATGTCATCGGTGAAACTATGGCGAGCAAAAGATCAGTACAAGAGTGGCATCGAG CAATCCAGGTTTTGACTTCATATGCGGCAGAGTTTTCAGGCGTGGAAGACAAGATTCTTCCGATATTGAAGTATAGCTAC GATAGTTTGGATGGTGAGATGACCAAGTCATGTTTTCTGTATTGCTCTCTGTATCCTGAAGATGGTCTTATTGATAAAGA AGAACTGATAGAGTATTGGATAGGTGAGGGGTTCATTGATGAGAAGGAAGGAAGAGAAATGGCAATGAACAAAGGTTATG AGATACTCTGGACCCTTGTCCGTGCATGTTTGTTGTTGGAAGATGATGAGGATGAATCAGAAGTGACAATGCATGATGTG GTACGGGAGATGGCCATGTGGATAGCCTCAGATCTTGGAAAGAATAAAGAAAAATGTATCGTACAAGCTGGTACCGGGAT ACGTGAAATACCCAAAGTGAAGAATTGGAAAGATGTGAGAAGAATTTCGTTGATGGAAAATGATATTCAAATCATATCTG AGAGCCCTGACTGTCCTCAACTTACAACTCTCCTCCTTCAGAGAAACAACAAATTCGTAGAGATATCAGATGGATTCTTT CAGTCTATGCCAAAGCTACTGGTTTTGGATTTATCATGGAATGATCTCAGTGGATTTCAAATGGATGTGAGCAATTTGGT TTCCTTGAGATATCTTAACTTGTCAAATACAAAGATATCAGAATTACCTTTTGGTTTAGAACGGTTGAAAATGCTAATAC ATCTGAATTTGGAGTGGACAGAGTACCTTGAGAGTTTAGAAGGGATATCAGGATTGTCAAGCCTGAGGACACTGAAGCTA CGAGATTCCAAAGTGCGGCTAGATATGAGCCTCATGAAGGAGCTTCAGCTCTTACAACATATAGAGTATGTAAGCGTAAG TATCTGGTCAAGTACTTTGGTTGGGGAGAAATTGTTCGATGACCCCAGAATGGGAAGATGCATCAAAAAAGTTTGGATTG ACGAGAAAGAGCCAGTAAAAGTAATAGTTTTGCCAGCTTTGGATGGTCTCTGTTGCATCTCCATACGGAGTTGTAAAATG TTGGAGGAAATAAAGATAGAGAAGACACCATTGAACAAAAGCATGTCAAGTCCATGCTTCTCAAATCTTACTCGAGTAAC AATAAAATTTTGTGATGGTCTAAAGGATTTGACGTGGCTGTTGTTCGCTCCGAACCTTACTCATCTTTTTGTGGTTTACT CAGTGCAACTAGAGGATATAATAAGCAAAGAGAAAGCTGAGAGTGTTTTAGAGAATAATAATATTATTCCTTTCCAGAAA CTAGAAAAGCTTTTCTTGGCCGATTTGCCTGAGCTTAAGAGCATCTACTGGAATGCTCTGCCATTTCAACGTCTGAGAGA ACTGTACATAACCGAAGGTTGTCAAAAGCTGAGAAAGCTTCCTCTGAATTCGAAAAGCGTCTTTGACGTTGAAGAATTTG TCATACAGTGCCGTTATAATAAAGAGTGGTTGGAAAGAGTTGAATGGGAGGACGAAGCCACAAGACTCCGTTTCTTACCT TCATGTACGACCCGATGA |
| AA seq | Len:886 aa MGGGFSVSLSCDQVVNQVFRCLCLKGSYVHNLPQNLASLEKAMGTLTAKRDDVQGRVDREEFTGHRRRLAQVQVWLTSIL TMENQYNELLNTSDVELQRLCLCRLCSKNVKKSYLYGKRVTGMLEEVKSLISQGVFIEVTDATSIAEGEELPIQPTIVGQ ETMLEMVWNRLMKDEVGIVGLYGMGGVGKTTLLTQINNRFSERGGGFDAVIWVVVSQNATVHKIQGSIGEKLGLGGKEWE EKSEMKRGQDIHNVLRKKKFVLLLDDIWEKVNLSTIGVPYPSKVNGSKVVFTTRSRDVCGRMGVDDPIEVCCLDTDKAWD LFKKKVGEHTLGRHPDIPELARKVAGKCRGLPLALNVIGETMASKRSVQEWHRAIQVLTSYAAEFSGVEDKILPILKYSY DSLDGEMTKSCFLYCSLYPEDGLIDKEELIEYWIGEGFIDEKEGREMAMNKGYEILWTLVRACLLLEDDEDESEVTMHDV VREMAMWIASDLGKNKEKCIVQAGTGIREIPKVKNWKDVRRISLMENDIQIISESPDCPQLTTLLLQRNNKFVEISDGFF QSMPKLLVLDLSWNDLSGFQMDVSNLVSLRYLNLSNTKISELPFGLERLKMLIHLNLEWTEYLESLEGISGLSSLRTLKL RDSKVRLDMSLMKELQLLQHIEYVSVSIWSSTLVGEKLFDDPRMGRCIKKVWIDEKEPVKVIVLPALDGLCCISIRSCKM LEEIKIEKTPLNKSMSSPCFSNLTRVTIKFCDGLKDLTWLLFAPNLTHLFVVYSVQLEDIISKEKAESVLENNNIIPFQK LEKLFLADLPELKSIYWNALPFQRLRELYITEGCQKLRKLPLNSKSVFDVEEFVIQCRYNKEWLERVEWEDEATRLRFLP SCTTR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | disease resistance protein RFL1-like; K13459 disease resistance protein RPS2 (A) |