Names & Information
Knowledge of BnaC08G0441700GG:
| Gene Name | BnaC08G0441700GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance protein [Brassica rapa subsp. pekinensis] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g12290 OS=Arabidopsis thaliana GN=At1g12290 PE=2 SV=1 |
| NT seq | Len:2673 nt ATGGGTAGTTGTGTCTCTGTCCAGCTCCAAGCACCATGCGTTGAAGTGCTGAACCATCTCGGTAGCTGCTTCTGCAGCAA ACTTAAATATATCCAAAACCTCAGGAAGAATCTTGTGGATTTGGAGACAGCCATGGAAGATCTCAAGGCGGTGCGATCTG ATCTGCTACGGAAGGTGCATGCAGCAGAAGAAGGAGGAGGTCTACAAAGGCTTCATCAAATCAAGGTATGGCTTGAGAGA GTCGAGTCTATTGAATCTAAATTCAATGGTCTATATAGTAGTAGAGATGTTGAACTTAAGAGGTTGTGTTTTAATGGGGC TGGCCCCAAGAATTTAAGATTGAGCTATCTTTACGGAAAGAGGGTCTTCAAGATGTTGAATATGGTTAAAGACTTGAAAT CTAAAGGGTTTTTTGAAGAGGTGGCTAGTCCTGCTGCTAGAGCTGTGGGAGAGGAAAGACCTTTAACCCCAACGGTCGTT GGTCAGGAAACAGTTCTTGAAAAGGCGTGGAACCACCTCATGGATGATGGAACTAAGATCATGGGTCTATACGGTATGGG TGGAGTAGGGAAAACAACTCTTCTCACACAGATCAACAATAAGTTTGTTGATATGTGTGACACACATGATGGGGTTGTGA TAGTCATTTGGGTTGTGGTCTCTGGTGATCTACAAGTCCACAAGATACAACACAGGATTGGCAACAAGATAGGATACAAA GGTGTTGAATGGAAAAAGAAAAAGAAAAACCAAAAGGCACTAGACATATTCAATTTCTTAAGCAAGAAGAGATTCGTGTT GCTTTTGGATGACATATGGAGGAAAGTAGATTTAACCGAGATTGGTATCCCTAATCCAACAAGCCAAAACGGATGCAAGA TAGTATTCACAACTCGCTCTCTAGGCGTATGTACAAGTATGGGTGTCCATGAACCAATGGAGGTACGATGTTTAAGCACA AACGATGCGTGGGACTTGTTCAAGAAGAAAGTTGGACAAAACACACTTGATATACATCCTGACATTCCCAAGATCGCAAG AAAAGTCGCTGGAGCATGCCGTGGCTTGCCTCTAGCGTTGAATGTAATCGGAGAGACAATGTCATGTAAGAAGACGACAC AAGAATGGTACCATGCGGTTGATGTTTTGAAAACTTACGCTGCGGATTTTAGTGACGTGAAGGAGAAGATACTCCCCATT TTGAAGTACAGCTATGATAATCTTGAAGGTGAAAATGTCAAATCTTGCTTCCTGTATTGCTCTCTGTTTCCTGAAGATGC TTTGATAGACAAAGAGAGGGTTATAGATTATTGGATATGTGAAGGGTTCATTGATGGGGTTGAGAGTAAAGAAAGAGCAG TGAACCAAGGGTATGAGATACTAGGCACCCTTGTGTGCGCCTCTTTATTACAGGAAGGAGGGAAGTACGACAACAAGTCA TACGTGAGAATGCATGATGTGGTTCGAGAGATGGCACTGTGGATAGCATCTGATCTTGAGAAGCATAAAGAAAGTTACAT CGTACGAGCTGGTGTTGGGTTAAACGAAGTGCCAAAGGTCCAGAACTGGCAACTTGTGACAAGGATGTCACTGGTGAATA ACAAGATCAAAGAGATACATGAGAGTCATCATGAGTGTCCTAACCTTACAACTCTTCTCCTTCAGAACAACAGATGTCTT GTAAGCATCTCCGGTGAATTCTTCAGTTCTATGCCAAGACTAGTTGTTTTGGATCTTTCGTGGAACGTCGAACTCAAAGC TTTGCCTGAGCAAATATCAGAGCTGGTTTCATTGCGTTATCTTGACTTGTCAGAGTCAAACATTGTGAGATTACCCGTTG GTTTACAGAAGCTGAAAAGGCTGAGGCATCTGAATCTAGAGTCTATGCTGTGCCTTGAAGGTGTCTCAGGGATATCGAAT CTGTCGAGTTTGAAGACGTTGAAGCTACTTAACTTCATAATGTGGCCAACCATGAGCTTACTAGAGGAGCTGGAACGCTT GGAACATTTAGAAGTTCTGACCGTAGAGATCACGTCAAGTTCAGTATTGAAACAACTCTTGTGCTCTCACAGGTTGGTGA GATGTCTTCAAAAGCTATCTATCAAGTACATAGAGGAAGAGTCAGTCAGAGTTTTGAGTCTGCCAACGATACAAGATCTC CGTGAAGTGTTTATAGGAGGGTGTGGGATCCGGGAGATAATGATAGAGAGGAACACAATGCTGACAAGTCCATGCTTACC TCACCTATCCAAAGTTTTGATTGCTGGTTGCAATGGTCTCAAGGATTTGACGTGGCTTTTGTTCGCTCCTAACCTCACTC ATCTAAGTGTCTGGAACTCAAGCCAACTAGAAGAGATAATAAGCCAAGAGAACGCTGCAGGGGTTGAGATTGTTCCTTTT AGGAAGCTAGAATATCTACACTTGTGGGATTTGCCTGAGCTGATGAGCATATACTGGAGTCCTTTGCCGTTTCCGTATTT GAGTCTGATCAATGTACAAAACGATTGTCAGAAGCTGAGAAGGCTTCCTTTGGACTCTCAAAGTTGTGTTGCGGGTGAAG AGCTTGTCATAGAGTACGGAGATGAAGAATGGAAAGAAAAAGTTGAATGGGCGGATGAAGCCACTAGACTCCGTTTCTTA CCTTCATGCAAGTTGGTTTTGTATGATGTTTGA |
| AA seq | Len:891 aa MGSCVSVQLQAPCVEVLNHLGSCFCSKLKYIQNLRKNLVDLETAMEDLKAVRSDLLRKVHAAEEGGGLQRLHQIKVWLER VESIESKFNGLYSSRDVELKRLCFNGAGPKNLRLSYLYGKRVFKMLNMVKDLKSKGFFEEVASPAARAVGEERPLTPTVV GQETVLEKAWNHLMDDGTKIMGLYGMGGVGKTTLLTQINNKFVDMCDTHDGVVIVIWVVVSGDLQVHKIQHRIGNKIGYK GVEWKKKKKNQKALDIFNFLSKKRFVLLLDDIWRKVDLTEIGIPNPTSQNGCKIVFTTRSLGVCTSMGVHEPMEVRCLST NDAWDLFKKKVGQNTLDIHPDIPKIARKVAGACRGLPLALNVIGETMSCKKTTQEWYHAVDVLKTYAADFSDVKEKILPI LKYSYDNLEGENVKSCFLYCSLFPEDALIDKERVIDYWICEGFIDGVESKERAVNQGYEILGTLVCASLLQEGGKYDNKS YVRMHDVVREMALWIASDLEKHKESYIVRAGVGLNEVPKVQNWQLVTRMSLVNNKIKEIHESHHECPNLTTLLLQNNRCL VSISGEFFSSMPRLVVLDLSWNVELKALPEQISELVSLRYLDLSESNIVRLPVGLQKLKRLRHLNLESMLCLEGVSGISN LSSLKTLKLLNFIMWPTMSLLEELERLEHLEVLTVEITSSSVLKQLLCSHRLVRCLQKLSIKYIEEESVRVLSLPTIQDL REVFIGGCGIREIMIERNTMLTSPCLPHLSKVLIAGCNGLKDLTWLLFAPNLTHLSVWNSSQLEEIISQENAAGVEIVPF RKLEYLHLWDLPELMSIYWSPLPFPYLSLINVQNDCQKLRRLPLDSQSCVAGEELVIEYGDEEWKEKVEWADEATRLRFL PSCKLVLYDV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | RGA37; probable disease resistance protein At1g12290; K13459 disease resistance protein RPS2 (A) |