Names & Information
Knowledge of BnaC08G0448400ZY:
| Gene Name | BnaC08G0448400ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC08g40550D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=3 SV=2 |
| NT seq | Len:2469 nt ATGTCTATGCCTCAATGGAAGTTATATCCACAATCTCCCCCAGAATCTAGTGATCTCCAGAAAATCATGGGAGCTCTCAA GGCTAAAAGAGATGATGTTCAAAGGAAGGTAGACAGAGAAGAGTTTACTGGACATCGTCGAAGGCTTGCTCAAGTCCAGG TATGGCTTACGAGTATCCTCACAATGGAAAACCAATATAATGAGCTTCTTAAGACTAGTGACGTTGAGCTGGAAAGGTTG TGTCTCTGTCGATTATGCTCTAAAAATGTGAAAAAGAGCTATCTTTATGGGAAAAGGGTTATGGTAATGTTGAGGGAGGT TGAGAGTCTTAGTTCTCAGGGAGAATTTGATGCGGTGACTGATGAAACTCCTATAGGTGAGGGTGAAGAGTTGCCTATCC AACACACAATTGTTGGTCAGGAAACAATGCTGGAAATGGTATGGGGGGGAGTTGGCAAAACCACCCTTCTCACGCAGATC AACAATAGGTTTTCTAAAAGAGGTGGTGGGTTTGATGTTGTGATATGGGTTGTGGTGTCACAAAATGCAACAGTCCATAA GATTCAAGGGAGCATCGGTGAAAAGCTAGGGCTTCTGGGGAAAGAGTGGGAGGAGAAAAGTGAGATGAAGAGAGGCCAAG ACATCCACAACGTTCTTAGGAAGAAGAAGTTTGTGTTGTTTCTGGATGATATATGGGAGAAAGTGAGCTTAGATGTGATT GGAGTCCGCTATCCGAACAGAGTAAACGGATGCAAAGTAGCATTTACCACCCGCTCTCGAGAAGTATGTGGGCGCATGGG GGTTGACGACCCAATCGAAGTCTGTTGTCTACACACGGACAAAGCCTGGGATTTGTTCAAAAAGAAAGTCGGGGAAAACA CGTTGGCCAGCCACCGGGACATTCCCGAACTCGCAAGGAAAGTCGCTGGTAAATGCCGTGGCCTACCATTGGCACTCAAT GTCATCGGTGAAACTATGGCGAGCAAAAGATCAGTACAAGAGTGGCGTCTAGCAGTTGATGTGTTGACTTCCTCTGCCAC AGAGTTTTCAGGCGTTGAAGATGAGATTCTTCCGATATTGAAGTATAGCTACGATAGTTTGGATGAGAGATTGATAGAGT ACTGGATAGGTGAGGGGTTCATTGATGAGAAGGAAGGTAGAGAGAGGGCATTGAACCAAGGTTATGAGATACTCGGGACA CTTGTCCGTTCATGTTTGTTGTTGGAAGATAACCCGAACGTTGTGAAAATGCACGATGTGGTGCGGGAGATGGCCATGTG GATACCCTCGGATCTAGGAAAGAATAAAGAAAGATGTATCGTACAAGCTGGTGCCAGGATACGTGAATTGCCCAAAGTGA AGAACTGGAAAGATGTGAGAAGAATTTCGTTGATGGAAAATGATATTCAAATCATATCTGAGAGCCCTGACTGTCCTCAA CTTACAACTCTCCTCCTTCAAAGAAACTATCTTGTGGAGATCTCAGATGGATTCTTTCAGTCTATGCCAAAACTACTTGT TTTGGATTTATCACTGAATCGTCTCAGTGGATTTCGAATGGATATGTACAATTTGGTTTCCTTGAGATATCTTAACTTGT CACGGACATATATAGTGAATTTACCTTTTGGTTTATACCAGTTGAAAATGCTAACACATCTGAATTTGGAGAAGACGAGG TACCTTGAGAGTTTAGAAGGGATATCAGAATTGTCAAGCTTGAGGACACTGAAGCTGCTAGATTCCAAAGTGCGGCCAGA TATGAGCCTCATGAAGGAGCTTCAGCTCTTACAACATATAGAGTATGTAAGCGTAGGTATCTCGTCTAGTACTTTGGTCG GGGAGACATTGTTCGATGACTCCAGAATGGGAAGATGCATCCAACAAGTTGGGATTGACGAGAAAGAGCCAGTAAAAGTA TTAGTTTTGCCAGCTTTGGATGGTCTCCATGACATCTTCATACAGTTTTGTAGAATGTTGGAGGAGATAAAGATAGAGAA GACACCATGGAACAAAAGCCTGACGAGTCCATGCTTCTCAAACCTCACTCAAGTAGAAATACTATCTTGCAACGGTCTAA AGGATTTGACGTGGCTGTTGTTCGCTCCGAAACTTACTCATCTTCGTGTGGCTGGCTCAGTGCAACTAGAGAATATAATA AGCAAAGAGAAAGCTGAGAGTGTTTTAGAGGATTATATTATCCCTTTCCATAAACTAGAAGTGCTTGTCTTGGACGATTT GCCTGAGCTGAAGAGCATATATTGGAATGCTCTGCCTTTTCAACGTCTGAGATGGCTCCACATACTCAATGGCTGCCCGA AGCTGAGAAAGCTTCCTCTGAATTCGAAAAGCGTCGTCAACGTTGAAGAATTTGTCATAAGCTGCCCTGATGAAGAGTGT TTGGAAAGAGTTGAATGGGAGGACGAAGCCACAAGACTCCGTTTCTTACCTTCATGTAAGGAGGATTGA |
| AA seq | Len:823 aa MSMPQWKLYPQSPPESSDLQKIMGALKAKRDDVQRKVDREEFTGHRRRLAQVQVWLTSILTMENQYNELLKTSDVELERL CLCRLCSKNVKKSYLYGKRVMVMLREVESLSSQGEFDAVTDETPIGEGEELPIQHTIVGQETMLEMVWGGVGKTTLLTQI NNRFSKRGGGFDVVIWVVVSQNATVHKIQGSIGEKLGLLGKEWEEKSEMKRGQDIHNVLRKKKFVLFLDDIWEKVSLDVI GVRYPNRVNGCKVAFTTRSREVCGRMGVDDPIEVCCLHTDKAWDLFKKKVGENTLASHRDIPELARKVAGKCRGLPLALN VIGETMASKRSVQEWRLAVDVLTSSATEFSGVEDEILPILKYSYDSLDERLIEYWIGEGFIDEKEGRERALNQGYEILGT LVRSCLLLEDNPNVVKMHDVVREMAMWIPSDLGKNKERCIVQAGARIRELPKVKNWKDVRRISLMENDIQIISESPDCPQ LTTLLLQRNYLVEISDGFFQSMPKLLVLDLSLNRLSGFRMDMYNLVSLRYLNLSRTYIVNLPFGLYQLKMLTHLNLEKTR YLESLEGISELSSLRTLKLLDSKVRPDMSLMKELQLLQHIEYVSVGISSSTLVGETLFDDSRMGRCIQQVGIDEKEPVKV LVLPALDGLHDIFIQFCRMLEEIKIEKTPWNKSLTSPCFSNLTQVEILSCNGLKDLTWLLFAPKLTHLRVAGSVQLENII SKEKAESVLEDYIIPFHKLEVLVLDDLPELKSIYWNALPFQRLRWLHILNGCPKLRKLPLNSKSVVNVEEFVISCPDEEC LERVEWEDEATRLRFLPSCKED* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | disease resistance protein RFL1-like; K13459 disease resistance protein RPS2 (A) |