Names & Information
Knowledge of BnaC08G0472400ZS:
| Gene Name | BnaC08G0472400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:1533 nt ATGAAGTTCGATGTATTCCTCAGTTTCAGAGGAATCGACACCCGAAGAACTTTCGTTAGCCATCTTCTCCTTGCACTGTT TAAAAAGCAGTTCAAGACTTTCAGACAAGAAGAAGAGATGCCATGGAATCAACCAGCTTCCACTCAAGTGCTCGAGGCAA TTGAAAACTCCAAAATAGCGATCGTGGTCATATCGAAGAACTACACTGCTTCAGTCTCGTGCCTGGACGAACTGGCGAAG ATAGTCGAGTGTGAGGAGAAACAGTCGCTGGTGATGATTCCAGTCCTACACGAGGTGGATCCTTCAGATGTTCTAGGGCA AGCACACAATCTTGATGGAGATAAAAACAACAACTGGGAGACGGTGGAGAGATGGAGAAACGCACTGGCCAGTATGATTA AGACCTATCAACAACAAGTATACTCTCATTGGGAGGATGGAGACTCAAGTGAGGATGGAGACACAGACGCTTTCATTATT TATAGAGTTATGCTCCAGGTTTCGAAACGTTTGAAACCACCCCCGAAAATGGCAGAGGCTATATATTATTGTCACTGGAC GATACCTGAAAAAACTGGATTTCTCACCAAGGGGATCATGCTTGTTAGAGCTGCTTTCAGGAAGATAGCTGGGAGAATTA TGTATGCAGAAAAGCTTATTAGTGTCGTCAACCCTAGTACGCCTGCAAGGAGCCCTGCGTACGTGCAAAAAGAGAAGTAT GTTACGGGCAACGAGTTGTCTCAATTGGTTCCATCTATTGATTTCGATAGCCTTGTTGGGATGGATCGGCAAATGAAAGC AGTGGACGCACTGCTGCTTAATATGGATTCCGAAGAAGACGGACTTGGAGAAATGGGCATTTGTGGTGGGGAAAGAGTTG GCAAAACAACACTTGCGAGATGTGTTTACCAAAAGATCTCACCACAGTTTCAAGATCACTACTACTTTGAGTATGAAACC GCACACTCTTCTCTGGGAATTGGTTCAACCTGTTTGCTAGAGAAAATCGCAAGAGCTGGTCTATCGGCAAAAGTAGCTGT TAGACCAGGTGAAGTTGTCAAATTGGAGTTAGAGAGTTTCGATGAACTTGTGAATGCGAATCTTGGACATCGGAAGGTTT TGCTTATTGTAGATATCCATCTCTATGCCACTGGCCAACTCGAAAATATCAGAAACAGTGCTCGTCGGTTTGGTCCAGGG AGTAGACTGATATATGTCACCCAGTCCAATCGTGTGCTACTCAAGTGTGGAGTCAAACACCTCTACAAAGTTGAGACTCT AAGATATGATGAAGCTCTTCAGCTCTTTTCACAATATGCCTTCAAACAGGAACACGTCCCTAGGGAGTACTTCCGTCTCT CCATTCGTGCTGTCCTCATTACAGGTCGTATTCCACTGACCCTAAAAGTATTCGGCTCCTTCCTACGCGGGAAAACCGTC AGTGAATGGGAATCCGAGCTATGTAGACTTGAAGCATCGCAGGATAACTGCGTTGCAAAAGTTTCTAGCTATATCGGAAA TGCCTTCTCTTGA |
| AA seq | Len:511 aa MKFDVFLSFRGIDTRRTFVSHLLLALFKKQFKTFRQEEEMPWNQPASTQVLEAIENSKIAIVVISKNYTASVSCLDELAK IVECEEKQSLVMIPVLHEVDPSDVLGQAHNLDGDKNNNWETVERWRNALASMIKTYQQQVYSHWEDGDSSEDGDTDAFII YRVMLQVSKRLKPPPKMAEAIYYCHWTIPEKTGFLTKGIMLVRAAFRKIAGRIMYAEKLISVVNPSTPARSPAYVQKEKY VTGNELSQLVPSIDFDSLVGMDRQMKAVDALLLNMDSEEDGLGEMGICGGERVGKTTLARCVYQKISPQFQDHYYFEYET AHSSLGIGSTCLLEKIARAGLSAKVAVRPGEVVKLELESFDELVNANLGHRKVLLIVDIHLYATGQLENIRNSARRFGPG SRLIYVTQSNRVLLKCGVKHLYKVETLRYDEALQLFSQYAFKQEHVPREYFRLSIRAVLITGRIPLTLKVFGSFLRGKTV SEWESELCRLEASQDNCVAKVSSYIGNAFS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |