Names & Information
Knowledge of BnaC09G0074600GG:
| Gene Name | BnaC09G0074600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: putative disease resistance RPP13-like protein 3 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=3 SV=1 |
| NT seq | Len:3198 nt ATGAACCTCTGTCGCCTCTGTCGAAAGGGAAAGAGAAATTTTTTTTTTGTTTTCGGGTTCAAGAAGTACAAGGTTTCCGA CATTGTCTTCTTCGAGATCCGGCCAGGTGGAGTCTACACCAAAGCTCAATTGCAGAAGGAGCTCGAAACCCTAGCTACTT GCGGAATGTTCGAGAAAGTCGACTTGGAGGGGGAGACCAAGCCCGACGGAACCCACCCTAGGAGTCACCATCTCCTTCGC GGAGAGCACGTGGCATCAAAGCCAATCGAGATGGATGCAGACATGACGGATAAAGAGAAGCTTGAGTATTGCTCAGTGCG AGGTTCTCTGAGGAATATCAACTCACTAGGGTTGTTCTCCAACATTGAGGTGAATCCACGCCAAGATGAGAAAAAAAACG AAGGGGGCATTATTGTTGAGATCAAACTGAAATGGAGTCTAGTTCCTGGACCTGGAGGACCTCCCACTCTGGCTTCATTA TGCATCATCAGGCTTCATTCCAGCCAGGTGGGGTCTGTTACTTTTTCGAACATCGAAATATCCAGGGTCTTAACAGGTCT CTTATGGGTTCAGTCACCACTAGCAACTTCTCGGAATAACAACACCAAGTTTGTCAACGGGGCTGTTGTTGGAGAGAGGA ACGTGTTCCAGGTGGATCAAAGATTGGGTATTGGAAGCAAATTCCCTTTCTTCAACCGTCGTCACCAATTGACATTGACA AGATTCATTCAACTGCAGCAGTCCTTCATGGACATTATGGTGGTTGTGTTGGCGATCTTCCAAGCGACGAAGCCTTTTGT TCTTGGAGGTCCATACTCTGTCCGTGGCTACAACATGGGGGAGCTCGGTGCGGCCAGAAACATCCTCGAGAGTACCTGTG AAGAACACGCATGTGTGTATGCATTTGCTGAGCATTGGAACGATTTGGGAAGCTCCAAGGACGTGAAAGGGAACCCAACC GCAGTGTATAGGAGAATGGGACAAGGTTCATCATACGGTGTAGGAGTGAAGTTAGGTTTGGTAAGAGCTGAGTATGCTTT AGATCACAACAATGGAACTGGTGCTCTGTTTTTCCGGGTTTGGAGAGAGGTATTAAGGTTAGTGAGAAGGATGTCGAAGC ACGAGAAAGAGAAGATGAGGTCTCAAAAGAGTGGAGTTTTAGATATAGCTTATGATGTAGAAGATGTTTTGGACACTTAT TTTCTAAAATTCAAAGAAAGATCACAGAGGAAAGGTTTGATGAGACTGGCCAACAAAATAGGCGAGAAAAAGGATATAGG TGACGATATCAGATCCCTCAAGAGAAGACTTGTCGATATCACTCGCAAGCGTCAGACTTACGGCATAGGAAGATTCAAAG AGGTAACAAGTTCGAGGAGAAGATTTGAGTATCGCGCCTGGACCTATGTTTCTCAAGATTATAATACACGAGATATGCTT TTAAGAATCATAAGATCTCTAGGAGTTGCTTCTGGTGAAGAGCTTGAAAGGATCAAGATGTTTACAGAGGAGGAGGAGCT AGAAGCTTACCTTCATGATCTTCTAGACGGAAGAAGGTACTTGGTGGTGGTAGATGATATATGGAAGCAGGACGCGTGGG AGAGCCTAAAGCGAGCCTTACCGTGCAATCATGGAGAAAGTAGAGTCATCATCACTACACGCATCAAAGCTGTGGCTGAA GGCGTGGATGGGAGAGTCTATGTTCATAAGTTAAGGTTTTTGACGTTTGAAGAAAGCTGGAAACTGTTTGACCAGAAAGC ATTCATGAATTTTCAATGGGTTGTCGATGAGGATCTGCATAGAATTGGCAAAGTAATGGTTCAAAAATGCGATGGTTTAC CTCTTGCTATAGTCGTTCTTGCTGGGCTATTGTCTAAGAAGAGGCCAAATGAGTGGCATGAGGTGTGTGCCAGTGTCTGG CGATTCCTAAAGGATAACTCTATTCATATATCCACTGTATTCGATTTAAGTTTCAACGAGCTGCATTATGAGTTGAAACT CTGCTTTCTTTATCTTAGCGTCTTCCCTGAGGACTATGAGATTGATGTGGAGAAATTAATACACTTACTTGTAGCAGAAG GGTTTATACAAGAGGATGGAGAAATGATGATGGAAGATGTGGCTCGGCATTACATAGAAGAGCTGATAGACATAAGCTTA GTGGAAGCAGTGAGGAGAGAAAGAGGGAAAGTGGTGTTTTGTAGAATCCATGATCTTCTTAGAGACGTGGCTATCAAGAA AGCAAAAGAGATCAACTTTGTAAGTCTTGTTTATAACGAGCATCATTCTTCAACTACTTGCAGAAGAGAAGTGGTACACC ATCTTATGGACAACAACTACTTGTGTGACAGACGTGTGAACAAACGGATGCGGTCCTTCTTGTTCTTCGGAGAGCAGAAG GGAATGCTGGGAAGATACATCCCCTTTATGAGTTTACCAGATGTGATATGCGAGTCAATACACTTGAGGTATCTTGGTGT AGCTGATACTGGTCTTAGACATTTACCATCTCCCATCTCCAACTTAGAGTTTCTACAAACACTAGATGCATCAGGCAACC GGTTTGAGGGAATGACTGATCTACGTAAGCTCACATCACTAAGGCACCTCATGGGAAGATTCATTGGAGAATTACTAATA GGAGATGCGGTTAACCTTCAGACTTTAAGGTCTATCTCCTCCTATAGCTGGAGTAAGATACAATGTAAGTCACTCAAAAA CCTTCGAGACTTGGAGATATATGATTCCGGGTATGTAGAGCTGACAAGAGTTCGTTTAAACTTGAGTTCCTTCTCTAATC TAACAAATCTCCGTGCCTTAACTCTGAGAGTACCGACCTTCAGAATATCATCAGAGGCAGTTGTGTTCCACATGGATGTG TTCTTTCCCAGTCTTGAGTCTTTGACATTTTCCGGAACAAATCTCGAGGAAGACCCAATGCCTGCTTTGCAGAAACTGCC CAGACTGGAAGATCTAGTCCTGGAAGATTGTGATTGCTCGGAAGTAAAGATGAGCTTCAGTGCACAAGGTTTTGCTCGGC TGAGGAAGCTTGCATTGTTCAGGGTAAGATTAGATTCATTGTGGATAGAAGAAGAAGCCATGCCTAGTTTGATGCATCTG AATCTGGTCAACAGATTAGGACCAAGAACGAAGATGATGATTCCAGATCGATTCTTGGCACTTGTTAGAGGGTACTAG |
| AA seq | Len:1066 aa MNLCRLCRKGKRNFFFVFGFKKYKVSDIVFFEIRPGGVYTKAQLQKELETLATCGMFEKVDLEGETKPDGTHPRSHHLLR GEHVASKPIEMDADMTDKEKLEYCSVRGSLRNINSLGLFSNIEVNPRQDEKKNEGGIIVEIKLKWSLVPGPGGPPTLASL CIIRLHSSQVGSVTFSNIEISRVLTGLLWVQSPLATSRNNNTKFVNGAVVGERNVFQVDQRLGIGSKFPFFNRRHQLTLT RFIQLQQSFMDIMVVVLAIFQATKPFVLGGPYSVRGYNMGELGAARNILESTCEEHACVYAFAEHWNDLGSSKDVKGNPT AVYRRMGQGSSYGVGVKLGLVRAEYALDHNNGTGALFFRVWREVLRLVRRMSKHEKEKMRSQKSGVLDIAYDVEDVLDTY FLKFKERSQRKGLMRLANKIGEKKDIGDDIRSLKRRLVDITRKRQTYGIGRFKEVTSSRRRFEYRAWTYVSQDYNTRDML LRIIRSLGVASGEELERIKMFTEEEELEAYLHDLLDGRRYLVVVDDIWKQDAWESLKRALPCNHGESRVIITTRIKAVAE GVDGRVYVHKLRFLTFEESWKLFDQKAFMNFQWVVDEDLHRIGKVMVQKCDGLPLAIVVLAGLLSKKRPNEWHEVCASVW RFLKDNSIHISTVFDLSFNELHYELKLCFLYLSVFPEDYEIDVEKLIHLLVAEGFIQEDGEMMMEDVARHYIEELIDISL VEAVRRERGKVVFCRIHDLLRDVAIKKAKEINFVSLVYNEHHSSTTCRREVVHHLMDNNYLCDRRVNKRMRSFLFFGEQK GMLGRYIPFMSLPDVICESIHLRYLGVADTGLRHLPSPISNLEFLQTLDASGNRFEGMTDLRKLTSLRHLMGRFIGELLI GDAVNLQTLRSISSYSWSKIQCKSLKNLRDLEIYDSGYVELTRVRLNLSSFSNLTNLRALTLRVPTFRISSEAVVFHMDV FFPSLESLTFSGTNLEEDPMPALQKLPRLEDLVLEDCDCSEVKMSFSAQGFARLRKLALFRVRLDSLWIEEEAMPSLMHL NLVNRLGPRTKMMIPDRFLALVRGY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein RPP13-like; K13457 disease resistance protein RPM1 (A) |