Names & Information
Knowledge of BnaC09G0079300ZS:
| Gene Name | BnaC09G0079300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g06020D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:2964 nt ATGGCTTCATCTTCTTCTTCTTCCTCGTCTCGCATAAGGAGATACCATGTGTTCCCTAGCTTCCACGGGCCAGACGTCCG CAGAACTTTTCTTAGTCATTTACACAGACACTTCACAAATAAAGGAATCACGACCTTCAAAGATCAGGAGATTGAGAGAG GCCAAACGATCGTCCCTGAACTTGTACAAGCCATCAGAGAATCAAAAGTCTCCGTAGTTTTGCTCTCGAAGAACTACGCT TCTTCAAGCTGGTGCTTAGATGAACTAGTTGAAATCTTGAAGTGCAGAGAAGATCAGGGACAGATGATGATGACGATTTT TTACGACGTCGATCCATCCGATGTGCGGAAACAAAGTGGACGCTTTGGAAGTGCGTTCGAAAAAGCTTGCGAAGGGAAAC CAATGGAAGTGAAGCAGAGATGGACCGAAGCTTTGGCATATGTAGCAACCGTAGCAGGAGAACACTCTCTTAACTGGACT GATGAAGCTGGAATGGTCGAAAAGTTTGTCACGGATGTTTCGAACAAACTGAATGTTACACTGTCAAGGGATTACGACGG TGTGGTGGGACTGCAATCTCACTTGAGAAAACTGAACGCTTTGCTATGCCTTGAGTGCAATGAAGTGAAGATGATTGGAA TATGGGGTCCTGCTGGAATCGGCAAGTCCACGATTGCTAGAGTTTTATTCTGTCAGCTTTCTACCGATTTTCCACTTGGA TGCTTTATGGGGAACCTCAAGGGAGGTTACAAGAGCATCATTGGTGTTGATGATTATGATTTGAAGTTGGGTTTGCAAAA CCAACTCCTGTCTAAGATTTTGAATCAAAGGGATATGAGGGTGTATCATCTAGGTTCAATAAAAGAATGGCTACAAGATC AAAGAGTTCTTATCGTTCTTGATGATGTAGATGATCTAGATACACTAGACGTCTTGGCTAAAGAACTTTCCTGGTTTGGT TTGGGAAGTCGGATCATTGTTACCACAGAAGATAAAAAGATTTTGAAAGCACATGGGGTTCCAGATACCTACCAATACCA TGTCGATTTTCCATCCTCAAAAGAAGCCGTGGAGATCTTGTGTCTATCTGCTTTTAACCACAGTTCTCCACGAGAGGGTT TTGAAGAGGTCGCAAACAAAGTAGCAAAGCTTTGCGGTAATCTTCCGTTAGGCCTTTGTGTTGTGGGCTCATCTTTGCGT GGGGAGAGCAAGCAAGAGTGGGAACTTCAGTTATCTAGGATCGAAACTAGTCTTGATGCAAAAATCATAGACGTTTTAAG AGTGGGATATGACAGATTGTCAAAGAAAGATCAATCAATATTCCTTCACGTTGCAAGCATCTTCAACAATAATGGTTTTC TCTATGTGAAAGCCATGCTCGCTAACAGTAATTTGGATTTCGAAAATGGGTTGAAGACCCTAGATCTTAAATCTCTTGTG GATATATCTTTTGGGTGGATAGAGATGCACTCTTTACTACAACAATTGGGGAGACAAGTAGTTTATGAACAGTCTGATGA GCCCGGGAAACGTCAGTTTTTAGTAGAGGCCGACGAGATTTGTACTGTGCTTGCAAATGAAACAGGGACTGGATCTGTCA TAGGTATATCACTTGATACGTCGAAGGTCGGCGGGATGATTTCTATAAGTGGGCGAGCCTTTGAAGGAATGCGTAATCTC CGGTTCTTAAGATTTTACATGGGTTCTTATAATGAAAATGCTAGCTTCCCATGCATACTAGGGGATTTGACATATCTGCC TCGTCTAAGTATGCTTGATTGGGCGTTTTACCCAGGAAAACGTCTTCCTTCAACATTTCAGCCAGAATGTCTCGTTACGC TCCGTATGACGCACAGCAATCTCGAGAAGCTCTGGGGAGGAATCCAGCCCCTTGCAAATCTCAACGAGATGGATCTTAGC TTTTCCTATAAGCTGAAAGAAATGCCAAATCTTACGAATGCTACTAATCTTGAGACATTGACACTGACGGGCACAAGCCT GGTGGAGCTTCCCTCTTCTATTAAAAACTCACACAGACTGAAAGAGTTGAAGATGAGCTACTGTACTAAACTACGAGTCA TTCCCACCAACAACATCAACTTAGCATCTCTTGAGAAAGTCGACATGAACGGTTGCTCACGGTTGAGAACTTTTCCAAAT ATTTCTAGCAACATTGAATATCTTGATGTAGGAAACACAAAGATAGAAGATGTTCCTGCGTCTGTTGCTGAACGCTGGTC TCGCCTCAAGTATCTTATCATAGGCAACAAAAGCCTCAAGAGATTAACGCATGTCCCTATAAATGTAATTTATCTAGACC TAAGCAACAGTGATATAAAGAGGATTCCAGATTGTGTCATCGGTCTCCGGCATCTGCACGATCTTATCATCAGAAACTGC AGAAAACTAGTGTCACTGCAGAGTCTTCCCCTTTCGGTTTGGCTTCTCGATGCAACTGATTGTGGATCGCTCAAAAGCGT ACCATCTTCCATTTTCCATCCATTCAGAAAGTCCATGTTCCGTAACTGTTTGAAACTTGATGAAGAAGCAAGAAGGCTAA TAATACAACGATGGGATAGGTGTTCTTTTTTTGAAAAAAGCAGAGAAATCCCTGCTGAGTTCACTCACAAAGCCACAGGA AACTCCATAACCATCCCTGAGGGTACTTTCTCCACGTCTTCAAGTTTCAAGGCATGCGTCCTGCTTTCATCAGCCCTAGG GGTACAGTACTTAGATAGTAGTCTCTATTGTCGTCTAAGAAGCAAAGGTGAGCTCATCAACGAACTTAGGTTGTCTGTCG AGACGACGCATGCATTTCTGTCGGAACACCTGTTAGTGCTTTGTGGGACTTGTTTCAAAAAGAGAGATGCCATGACGTGG ACGTGTCTAGGAGTGATATTATATTTGAATTCAGCTGCCGAGACAACGATGAAAACATTATTGAGTGTGGTGTGCATATC TTGA |
| AA seq | Len:988 aa MASSSSSSSSRIRRYHVFPSFHGPDVRRTFLSHLHRHFTNKGITTFKDQEIERGQTIVPELVQAIRESKVSVVLLSKNYA SSSWCLDELVEILKCREDQGQMMMTIFYDVDPSDVRKQSGRFGSAFEKACEGKPMEVKQRWTEALAYVATVAGEHSLNWT DEAGMVEKFVTDVSNKLNVTLSRDYDGVVGLQSHLRKLNALLCLECNEVKMIGIWGPAGIGKSTIARVLFCQLSTDFPLG CFMGNLKGGYKSIIGVDDYDLKLGLQNQLLSKILNQRDMRVYHLGSIKEWLQDQRVLIVLDDVDDLDTLDVLAKELSWFG LGSRIIVTTEDKKILKAHGVPDTYQYHVDFPSSKEAVEILCLSAFNHSSPREGFEEVANKVAKLCGNLPLGLCVVGSSLR GESKQEWELQLSRIETSLDAKIIDVLRVGYDRLSKKDQSIFLHVASIFNNNGFLYVKAMLANSNLDFENGLKTLDLKSLV DISFGWIEMHSLLQQLGRQVVYEQSDEPGKRQFLVEADEICTVLANETGTGSVIGISLDTSKVGGMISISGRAFEGMRNL RFLRFYMGSYNENASFPCILGDLTYLPRLSMLDWAFYPGKRLPSTFQPECLVTLRMTHSNLEKLWGGIQPLANLNEMDLS FSYKLKEMPNLTNATNLETLTLTGTSLVELPSSIKNSHRLKELKMSYCTKLRVIPTNNINLASLEKVDMNGCSRLRTFPN ISSNIEYLDVGNTKIEDVPASVAERWSRLKYLIIGNKSLKRLTHVPINVIYLDLSNSDIKRIPDCVIGLRHLHDLIIRNC RKLVSLQSLPLSVWLLDATDCGSLKSVPSSIFHPFRKSMFRNCLKLDEEARRLIIQRWDRCSFFEKSREIPAEFTHKATG NSITIPEGTFSTSSSFKACVLLSSALGVQYLDSSLYCRLRSKGELINELRLSVETTHAFLSEHLLVLCGTCFKKRDAMTW TCLGVILYLNSAAETTMKTLLSVVCIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |